FN3132-S Chr1 10360688 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr1 20797926 20797926 0 0 Insertion 2 frameshift_variant HET LOC_Os01g37240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3132-S Chr1 2527332 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr1 3438530 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr1 43213370 G-T 0 0 Single Base Substitution 0 INTRON HOMO FN3132-S Chr10 12407415 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr10 14420073 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr10 14421597 14421611 0 0 Deletion 14 INTRON HOMO FN3132-S Chr10 15893826 A-G 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN3132-S Chr10 17196175 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr10 2923535 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g05790 POEI4 - Pollen Ole e I allergen and extensin family protein precursor, expressed FN3132-S Chr10 692051 C-A 0 0 Single Base Substitution 0 INTRON HET FN3132-S Chr11 1001714 Chr2 15292875 0 Translocation 0 FN3132-S Chr11 11179822 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr11 1207891 1207896 0 0 Deletion 5 INTRON HET FN3132-S Chr11 21364706 21364712 0 0 Deletion 6 intron_variant HET FN3132-S Chr11 503407 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr11 636343 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr12 11290147 11290154 0 0 Deletion 7 INTERGENIC HOMO FN3132-S Chr12 20762965 20762966 0 0 Deletion 1 upstream_gene_variant HET FN3132-S Chr12 2882360 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr12 3246954 3246963 0 0 Deletion 9 INTERGENIC HOMO FN3132-S Chr12 8348298 Chr10 15364393 0 Translocation 0 FN3132-S Chr2 13374696 13374696 0 0 Insertion 1 INTERGENIC HOMO FN3132-S Chr2 16066376 16066378 0 0 Deletion 2 INTERGENIC HET FN3132-S Chr2 25311755 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr2 25920001 25975000 0 0 Deletion 54999 LOC_Os02g43060 retrotransposon protein, putative, Ty1-copia subclass FN3132-S Chr2 25920001 25975000 0 0 Deletion 54999 LOC_Os02g43070 retrotransposon protein, putative, unclassified, expressed FN3132-S Chr2 25920001 25975000 0 0 Deletion 54999 LOC_Os02g43080 PPR repeat domain containing protein, putative, expressed FN3132-S Chr2 25920001 25975000 0 0 Deletion 54999 LOC_Os02g43090 myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed FN3132-S Chr2 25920001 25975000 0 0 Deletion 54999 LOC_Os02g43100 expressed protein FN3132-S Chr2 25920001 25975000 0 0 Deletion 54999 LOC_Os02g43110 sodium/calcium exchanger 1 precursor, putative, expressed FN3132-S Chr2 25920001 25975000 0 0 Deletion 54999 LOC_Os02g43120 zinc finger, C3HC4 type domain containing protein, expressed FN3132-S Chr2 25920001 25975000 0 0 Deletion 54999 LOC_Os02g43130 kinesin motor domain containing protein, expressed FN3132-S Chr2 25920001 25975000 0 0 Deletion 54999 LOC_Os02g45310 dehydration response related protein, putative, expressed FN3132-S Chr2 26392004 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr2 28264979 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr2 35408079 35408089 0 0 Deletion 10 INTERGENIC HET FN3132-S Chr2 360680 360680 0 0 Insertion 1 upstream_gene_variant HET FN3132-S Chr2 5348110 5348112 0 0 Deletion 2 INTERGENIC HOMO FN3132-S Chr2 9762694 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr3 29779159 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr3 4470467 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr3 6214489 6214491 0 0 Deletion 2 INTRON HET FN3132-S Chr3 7100797 T-A 0 0 Single Base Substitution 0 INTRON HET FN3132-S Chr3 8489585 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr3 9177569 9177570 0 0 Deletion 1 INTERGENIC HOMO FN3132-S Chr4 11039949 11039963 0 0 Deletion 14 FRAME_SHIFT HOMO LOC_Os04g19760 retrotransposon protein, putative, unclassified, expressed FN3132-S Chr4 18989030 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN3132-S Chr4 22286402 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr4 26216887 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr4 26928713 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr4 33593427 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr4 9445501 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr5 12748341 12748341 0 0 Insertion 29 upstream_gene_variant HET FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23190 retrotransposon protein, putative, unclassified, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23194 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23200 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23210 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23220 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23230 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23240 CAX-interacting protein 4, putative, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23250 Leucine Rich Repeat family protein, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23255 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23260 OsSigP4 - Putative Type I Signal Peptidase homologue; employs a putative Ser/His catalytic dyad, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23270 hypothetical protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23280 retrotransposon protein, putative, unclassified, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23310 retrotransposon protein, putative, unclassified FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23320 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23330 transposon protein, putative, Pong sub-class, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23340 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23350 glycosyl hydrolase family 10 protein, putative, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23360 transposon protein, putative, unclassified FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23380 transposon protein, putative, unclassified, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23389 retrotransposon protein, putative, Ty3-gypsy subclass FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23393 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23398 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23410 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23420 sugar porter, putative, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23430 WD domain, G-beta repeat domain containing protein, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23440 solute carrier family 35 member F1, putative, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23450 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23460 eukaryotic protein of unknown function DUF914 domain containing protein, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23470 AN1-like zinc finger domain containing protein, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23480 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23490 expressed protein FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g23500 retrotransposon protein, putative, unclassified, expressed FN3132-S Chr5 13220001 13464000 0 0 Deletion 243999 LOC_Os05g26810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3132-S Chr5 13475397 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr5 13475398 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr5 13892651 13892656 0 0 Deletion 5 INTERGENIC HET FN3132-S Chr5 27992134 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr5 346092 346092 0 0 Insertion 2 INTRON HET FN3132-S Chr5 7193104 G-A 0 0 Single Base Substitution 0 INTRON HET FN3132-S Chr5 7658697 7658703 0 0 Deletion 6 INTERGENIC HET FN3132-S Chr5 7940170 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr6 12656488 C-G 0 0 Single Base Substitution 0 INTRON HET FN3132-S Chr6 20809362 20809364 0 0 Deletion 2 FRAME_SHIFT HET LOC_Os06g35650 reticuline oxidase-like protein precursor, putative, expressed FN3132-S Chr6 23066967 G-A 0 0 Single Base Substitution 0 INTRON HET FN3132-S Chr6 24442161 24442162 0 0 Deletion 1 INTERGENIC HET FN3132-S Chr6 5006634 5006641 0 0 Deletion 7 INTRON HOMO FN3132-S Chr6 9003437 9003437 0 0 Insertion 54 downstream_gene_variant HET FN3132-S Chr7 1188610 Chr4 18475332 0 Translocation 0 FN3132-S Chr7 13363615 13363616 0 0 Deletion 1 INTERGENIC HOMO FN3132-S Chr7 14622473 14622474 0 0 Deletion 1 INTERGENIC HOMO FN3132-S Chr7 16126345 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr7 16886672 16886673 0 0 Deletion 1 INTERGENIC HET FN3132-S Chr7 18226425 G-A 0 0 Single Base Substitution 0 INTRON HET FN3132-S Chr7 19309344 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN3132-S Chr7 23312769 23564908 0 0 Inversion 252139 FN3132-S Chr7 23312781 23564909 0 0 Inversion 252128 FN3132-S Chr7 5440325 Chr6 7372684 0 Translocation 0 FN3132-S Chr7 5829124 5829125 0 0 Deletion 1 INTRON HET FN3132-S Chr7 8921462 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3132-S Chr7 9890367 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr8 14169693 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN3132-S Chr8 18315316 18315317 0 0 Deletion 1 upstream_gene_variant HET FN3132-S Chr8 1894288 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3132-S Chr8 27733481 G-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN3132-S Chr8 4068135 T-A 0 0 Single Base Substitution 0 INTRON HET FN3132-S Chr8 7021900 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr9 13250037 13250037 0 0 Insertion 6 upstream_gene_variant HET FN3132-S Chr9 1383674 1383674 0 0 Insertion 1 frameshift_variant HET LOC_Os09g02950 retrotransposon protein, putative, unclassified, expressed FN3132-S Chr9 13874133 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr9 14077814 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3132-S Chr9 17919458 17919464 0 0 Deletion 6 INTRON HOMO FN3132-S Chr9 4789703 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET