FN3147-S Chr1 13923366 T-G 0 0 Single Base Substitution 0 INTRON HET FN3147-S Chr1 21436127 T-G 0 0 Single Base Substitution 0 INTRON HET FN3147-S Chr1 21845423 A-T 0 0 Single Base Substitution 0 INTRON HET FN3147-S Chr1 36594930 36594931 0 0 Deletion 1 intron_variant HET FN3147-S Chr1 37427266 37427266 0 0 Insertion 1 upstream_gene_variant HET FN3147-S Chr1 40421947 40421947 0 0 Insertion 4 INTERGENIC HET FN3147-S Chr10 10274083 10274084 0 0 Deletion 1 frameshift_variant HET LOC_Os10g20430 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3147-S Chr10 10984982 10984988 0 0 Deletion 6 upstream_gene_variant HET FN3147-S Chr10 11005060 11005068 0 0 Deletion 8 INTERGENIC HOMO FN3147-S Chr10 1334576 1334577 0 0 Deletion 1 upstream_gene_variant HET FN3147-S Chr10 14002198 14002198 0 0 Insertion 1 upstream_gene_variant HET FN3147-S Chr10 15536814 15542108 0 0 Inversion 5294 FN3147-S Chr10 15536819 Chr9 4206121 0 Translocation 0 FN3147-S Chr10 5415697 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3147-S Chr10 8605251 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN3147-S Chr10 9940714 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3147-S Chr11 17738803 17738803 0 0 Insertion 9 downstream_gene_variant HET FN3147-S Chr11 19416594 19416598 0 0 Deletion 4 downstream_gene_variant HET FN3147-S Chr11 22388538 22388538 0 0 Insertion 6 downstream_gene_variant HET FN3147-S Chr11 460922 460931 0 0 Deletion 9 CODON_CHANGE_PLUS_CODON_DELETION HET LOC_Os11g01869 double-stranded RNA binding motif containing protein, expressed FN3147-S Chr12 10761471 T-C 0 0 Single Base Substitution 0 INTRON HET FN3147-S Chr12 12769804 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3147-S Chr12 12769805 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3147-S Chr12 12769806 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3147-S Chr12 13711232 13711232 0 0 Insertion 1 upstream_gene_variant HET FN3147-S Chr12 26822345 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN3147-S Chr12 5124038 Chr1 8155925 0 Translocation 0 FN3147-S Chr12 5432430 5532171 0 0 Inversion 99741 LOC_Os12g10440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3147-S Chr12 5432441 5532179 0 0 Inversion 99738 LOC_Os12g10440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3147-S Chr2 23663010 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g39170 GDSL-like lipase/acylhydrolase, putative, expressed FN3147-S Chr2 24136845 T-A 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN3147-S Chr2 32547414 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3147-S Chr2 35438270 C-A 0 0 Single Base Substitution 0 INTRON HET FN3147-S Chr2 4120691 4120694 0 0 Deletion 3 INTRON HET FN3147-S Chr2 8009443 A-T 0 0 Single Base Substitution 0 INTRON HET FN3147-S Chr3 16445928 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN3147-S Chr3 34512959 34512981 0 0 Deletion 22 INTERGENIC HET FN3147-S Chr3 35595277 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN3147-S Chr4 10172187 10172187 0 0 Insertion 1 downstream_gene_variant HET FN3147-S Chr4 16649706 16972493 0 0 Inversion 322787 FN3147-S Chr4 16974001 17034000 0 0 Deletion 59999 LOC_Os04g28660 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3147-S Chr4 16974001 17034000 0 0 Deletion 59999 LOC_Os04g28670 expressed protein FN3147-S Chr4 16974001 17034000 0 0 Deletion 59999 LOC_Os04g28680 male sterility protein, putative, expressed FN3147-S Chr4 16974001 17034000 0 0 Deletion 59999 LOC_Os04g28690 fatty acyl coA reductase, putative, expressed FN3147-S Chr4 16974001 17034000 0 0 Deletion 59999 LOC_Os04g28700 retrotransposon protein, putative, unclassified FN3147-S Chr4 16974001 17034000 0 0 Deletion 59999 LOC_Os04g28710 hypothetical protein FN3147-S Chr4 16974001 17034000 0 0 Deletion 59999 LOC_Os04g28720 RALFL32 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed FN3147-S Chr4 16974001 17034000 0 0 Deletion 59999 LOC_Os04g28730 retrotransposon, putative, centromere-specific FN3147-S Chr4 16974001 17034000 0 0 Deletion 59999 LOC_Os04g28740 retrotransposon protein, putative, unclassified FN3147-S Chr4 16974001 17034000 0 0 Deletion 59999 LOC_Os04g28750 retrotransposon protein, putative, unclassified, expressed FN3147-S Chr4 16974001 17034000 0 0 Deletion 59999 LOC_Os04g28760 expressed protein FN3147-S Chr4 25567241 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3147-S Chr4 8157076 8157076 0 0 Insertion 6 intron_variant HET FN3147-S Chr5 11580365 11580365 0 0 Insertion 1 upstream_gene_variant HET FN3147-S Chr5 14312977 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3147-S Chr5 15419406 15419407 0 0 Deletion 1 upstream_gene_variant HET FN3147-S Chr5 20714043 20714051 0 0 Deletion 8 downstream_gene_variant HET FN3147-S Chr5 27244486 27357333 0 0 Inversion 112847 LOC_Os05g47750 Ser/Thr protein kinase, putative, expressed FN3147-S Chr5 27357298 27361632 0 0 Inversion 4334 LOC_Os05g47750 Ser/Thr protein kinase, putative, expressed FN3147-S Chr5 27357298 27361632 0 0 Inversion 4334 LOC_Os05g47770 serine/threonine-protein kinase At1g18390 precursor, putative, expressed FN3147-S Chr6 10840072 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g19060 expressed protein FN3147-S Chr6 14679346 14713263 0 0 Inversion 33917 FN3147-S Chr6 14710109 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g25140 retrotransposon protein, putative, Ty3-gypsy subclass FN3147-S Chr6 22533471 22533475 0 0 Deletion 4 INTRON HOMO FN3147-S Chr6 25550955 25550957 0 0 Deletion 2 INTERGENIC HET FN3147-S Chr7 17560456 17560479 0 0 Deletion 23 intron_variant HET FN3147-S Chr7 17738797 18670933 0 0 Inversion 932136 FN3147-S Chr7 18670925 18736324 0 0 Inversion 65399 FN3147-S Chr7 18736625 Chr5 5852815 0 Translocation 0 FN3147-S Chr7 20335933 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3147-S Chr7 23025757 23025757 0 0 Insertion 1 downstream_gene_variant HET FN3147-S Chr7 25178330 25178330 0 0 Insertion 2 frameshift_variant HET LOC_Os07g42060 retrotransposon protein, putative, unclassified, expressed FN3147-S Chr8 15328935 15328952 0 0 Deletion 17 INTERGENIC HOMO FN3147-S Chr8 17137899 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3147-S Chr8 20684108 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3147-S Chr8 25853950 Chr4 16536484 0 Translocation 0 LOC_Os04g28010 expressed protein FN3147-S Chr8 25853950 Chr4 16536484 0 Translocation 0 LOC_Os08g40860 RNA pseudouridine synthase, putative, expressed FN3147-S Chr8 3097222 Chr3 6443052 0 Translocation 0 FN3147-S Chr8 7011405 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN3147-S Chr9 12312643 Chr2 17968132 0 Translocation 0