FN3155-S Chr1 25680717 25680742 0 0 Deletion 25 INTERGENIC HOMO FN3155-S Chr1 25818540 25818547 0 0 Deletion 7 INTERGENIC HOMO FN3155-S Chr1 26131884 26131886 0 0 Deletion 2 intergenic_region HET FN3155-S Chr1 27134019 27134019 0 0 Insertion 2 UTR_5_PRIME HET FN3155-S Chr1 28124056 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3155-S Chr1 28916713 28916714 0 0 Deletion 1 upstream_gene_variant HET FN3155-S Chr1 31542201 31542204 0 0 Deletion 3 upstream_gene_variant HET FN3155-S Chr1 40152355 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr1 7776176 G-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3155-S Chr1 9051074 9051391 0 0 Inversion 317 FN3155-S Chr10 10589404 10662785 0 0 Inversion 73381 LOC_Os10g20900 hypothetical protein FN3155-S Chr10 10589404 10662785 0 0 Inversion 73381 LOC_Os10g21050 cytochrome P450, putative, expressed FN3155-S Chr10 10589407 10662802 0 0 Inversion 73395 LOC_Os10g20900 hypothetical protein FN3155-S Chr10 10589407 10662802 0 0 Inversion 73395 LOC_Os10g21050 cytochrome P450, putative, expressed FN3155-S Chr10 12206886 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3155-S Chr10 21733824 Chr2 18290254 0 Translocation 0 LOC_Os02g30700 MYB family transcription factor, putative, expressed FN3155-S Chr10 8142033 Chr4 16264617 0 Translocation 0 FN3155-S Chr11 12788717 G-A 0 0 Single Base Substitution 0 STOP_GAINED HOMO LOC_Os11g22310 retrotransposon protein, putative, unclassified, expressed FN3155-S Chr11 5026077 Chr8 3815136 0 Translocation 0 FN3155-S Chr11 9481168 9481170 0 0 Deletion 2 FRAME_SHIFT HOMO LOC_Os11g17090 expressed protein FN3155-S Chr12 22007103 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr12 24421222 24421231 0 0 Deletion 9 CODON_DELETION HOMO LOC_Os12g39580 retrotransposon protein, putative, unclassified, expressed FN3155-S Chr12 3444259 3444260 0 0 Deletion 1 INTERGENIC HOMO FN3155-S Chr2 15057506 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr2 20509365 20509365 0 0 Insertion 2 INTRON HET FN3155-S Chr2 32472234 T-A 0 0 Single Base Substitution 0 INTRON HET FN3155-S Chr2 4771986 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr3 12369760 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3155-S Chr3 20195633 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g36460 expressed protein FN3155-S Chr3 20195638 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g36460 expressed protein FN3155-S Chr3 20751017 Chr2 5356666 0 Translocation 0 FN3155-S Chr3 27054328 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3155-S Chr3 4609325 G-T 0 0 Single Base Substitution 0 INTRON HET FN3155-S Chr4 12040014 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr4 13700692 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr4 19147788 19147790 0 0 Deletion 2 INTERGENIC HOMO FN3155-S Chr4 28678826 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr4 32454540 A-T 0 0 Single Base Substitution 0 INTRON HET FN3155-S Chr4 47915 C-T 0 0 Single Base Substitution 0 INTRON HET FN3155-S Chr5 12801365 C-T 0 0 Single Base Substitution 0 INTRON HET FN3155-S Chr5 1542031 1542047 0 0 Deletion 16 INTERGENIC HOMO FN3155-S Chr5 20603982 20603998 0 0 Deletion 16 upstream_gene_variant HET FN3155-S Chr5 25529883 25532301 0 0 Inversion 2418 FN3155-S Chr5 25529888 25532298 0 0 Inversion 2410 FN3155-S Chr5 25829495 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr5 27677405 A-T 0 0 Single Base Substitution 0 INTRON HET FN3155-S Chr5 28989315 28989315 0 0 Insertion 2 upstream_gene_variant HET FN3155-S Chr5 5022234 Chr2 25341988 0 Translocation 0 FN3155-S Chr5 5509857 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g09724 HAD superfamily phosphatase, putative, expressed FN3155-S Chr5 759517 759549 0 0 Deletion 32 upstream_gene_variant HET FN3155-S Chr5 9613001 9623000 0 0 Deletion 9999 LOC_Os05g16880 retrotransposon protein, putative, Ty3-gypsy subclass FN3155-S Chr5 9613001 9623000 0 0 Deletion 9999 LOC_Os05g16889 expressed protein FN3155-S Chr5 9613001 9623000 0 0 Deletion 9999 LOC_Os05g17010 retrotransposon protein, putative, unclassified, expressed FN3155-S Chr6 1395994 1396008 0 0 Deletion 14 INTERGENIC HET FN3155-S Chr6 18870148 18870148 0 0 Insertion 1 frameshift_variant HET LOC_Os06g32450 retrotransposon protein, putative, Ty3-gypsy subclass FN3155-S Chr6 23608265 Chr2 20852148 0 Translocation 0 FN3155-S Chr6 23615509 Chr2 29578892 0 Translocation 0 FN3155-S Chr6 23615606 Chr2 29578899 0 Translocation 0 FN3155-S Chr6 27308310 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr6 604482 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr7 10246334 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr7 10483236 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr7 14724395 T-C 0 0 Single Base Substitution 0 INTRON HET FN3155-S Chr7 15159477 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr7 22240526 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3155-S Chr7 22665573 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3155-S Chr7 5035594 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr8 12720752 Chr5 27404610 0 Translocation 0 FN3155-S Chr8 19826502 19826515 0 0 Deletion 13 INTERGENIC HOMO FN3155-S Chr8 6082318 6082318 0 0 Insertion 1 upstream_gene_variant HET FN3155-S Chr8 8685024 8685029 0 0 Deletion 5 INTRON HOMO FN3155-S Chr8 9017537 9017546 0 0 Deletion 9 CODON_DELETION HOMO LOC_Os08g14950 receptor-like protein kinase 2 precursor, putative, expressed FN3155-S Chr9 10353479 Chr5 14533928 0 Translocation 0 FN3155-S Chr9 10898070 Chr8 12123008 0 Translocation 0 LOC_Os09g17810 leucine zipper protein-like, putative, expressed FN3155-S Chr9 11971250 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3155-S Chr9 1255024 1255024 0 0 Insertion 6 upstream_gene_variant HET FN3155-S Chr9 18821938 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3155-S Chr9 58947 58947 0 0 Insertion 1 upstream_gene_variant HET FN3155-S Chr9 9711261 9711261 0 0 Insertion 1 upstream_gene_variant HET