FN317-S Chr1 10651000 10651003 0 0 Deletion 3 FN317-S Chr1 17033151 17033162 0 0 Deletion 11 FN317-S Chr1 26632287 26632288 0 0 Deletion 1 LOC_Os01g46750 AMP-binding enzyme, putative, expressed FN317-S Chr10 14813865 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g28470 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01540 notchless protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01550 transposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01560 serine/threonine-protein kinase, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01570 C-5 cytosine-specific DNA methylase, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01580 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01590 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01600 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01610 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01620 hypothetical protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01640 decarboxylase, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01650 transferase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01660 transferase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01670 hypothetical protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01680 transferase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01690 transferase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01700 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01710 hypothetical protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01720 transferase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01730 hypothetical protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01740 hypothetical protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01750 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01760 peroxidase precursor, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01770 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01780 retrotransposon protein, putative, unclassified FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01790 transposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01800 transferase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01810 hypothetical protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01820 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01830 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01840 hypothetical protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01844 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01850 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01860 retrotransposon protein, putative, LINE subclass, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01870 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01880 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01890 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01900 retrotransposon protein, putative, LINE subclass, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01910 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01920 transferase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01930 transferase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01970 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g01984 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02000 transferase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02020 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02030 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02040 peroxidase precursor, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02050 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02070 peroxidase precursor, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02080 PTR-like peptide transporter, putatuve, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02090 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02100 peptide transporter PTR2, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02120 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02130 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02140 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02150 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02160 retrotransposon protein, putative, unclassified FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02170 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02180 retrotransposon protein, putative, unclassified FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02190 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02200 retrotransposon protein, putative, Ty3-gypsy subclass FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02210 peptide transporter PTR2, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02220 peptide transporter PTR2, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02230 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02240 peptide transporter PTR2, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02250 OsWAK95 - OsWAK receptor-like protein kinase, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02260 peptide transporter PTR2, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02270 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02276 OsWAK96 - OsWAK receptor-like protein kinase, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02284 OsWAK97 - OsWAK receptor-like protein kinase, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02300 uncharacterized Cys-rich domain containing protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02314 retrotransposon protein, putative, unclassified FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02330 hypothetical protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02340 peptide transporter PTR2, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02350 transmembrane 9 superfamily member, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02360 OsWAK98 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02380 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02400 transposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02410 expressed protein FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02420 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02430 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02440 retrotransposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02450 retrotransposon, putative, centromere-specific FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02470 deoxymugineic acid synthase1, putative FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02480 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02490 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02500 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02509 GAGA-binding protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02520 transposon protein, putative, unclassified, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02530 retrotransposon protein, putative, Ty3-gypsy subclass FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02544 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02570 retrotransposon protein, putative, unclassified FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02584 GAGA-binding protein, putative, expressed FN317-S Chr10 357774 994134 0 0 Deletion 636360 LOC_Os10g02600 retrotransposon protein, putative, unclassified, expressed FN317-S Chr11 11053143 11053144 0 0 Deletion 1 FN317-S Chr12 1720970 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os12g04110 pentatricopeptide, putative, expressed FN317-S Chr12 21891419 21891427 0 0 Deletion 8 FN317-S Chr12 23461991 23461991 0 0 Insertion 2 FN317-S Chr12 24751245 24751247 0 0 Deletion 2 FN317-S Chr12 27221257 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os12g43850 retrotransposon protein, putative, unclassified, expressed FN317-S Chr12 766367 766376 0 0 Deletion 9 FN317-S Chr2 20436001 20447000 0 0 Deletion 11000 LOC_Os02g34170 transposon protein, putative, unclassified, expressed FN317-S Chr2 20436001 20447000 0 0 Deletion 11000 LOC_Os02g34180 transposon protein, putative, unclassified, expressed FN317-S Chr2 20932419 C-A 0 0 Single Base Substitution 0 INTRON HOMO FN317-S Chr2 20936385 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN317-S Chr2 27075191 27075192 0 0 Deletion 1 FN317-S Chr2 4764911 4764917 0 0 Deletion 6 FN317-S Chr3 22127001 22140000 0 0 Deletion 13000 LOC_Os03g39780 retrotransposon protein, putative, unclassified, expressed FN317-S Chr3 22127001 22140000 0 0 Deletion 13000 LOC_Os03g39790 retrotransposon protein, putative, unclassified, expressed FN317-S Chr3 2505446 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN317-S Chr3 28444713 28444721 0 0 Deletion 8 FN317-S Chr3 35032123 35032125 0 0 Deletion 2 FN317-S Chr3 36001143 36001143 0 0 Insertion 2 FN317-S Chr4 10394394 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g18730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN317-S Chr4 13787173 13787175 0 0 Deletion 2 FN317-S Chr4 20660800 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN317-S Chr4 20660802 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN317-S Chr4 21580004 C-T 0 0 Single Base Substitution 0 INTRON HET FN317-S Chr4 21580009 C-A 0 0 Single Base Substitution 0 INTRON HET FN317-S Chr4 26469118 26469120 0 0 Deletion 2 FN317-S Chr4 34006564 Chr3 18216865 0 Translocation 0 LOC_Os03g31839 transposon protein, putative, unclassified, expressed FN317-S Chr4 6945052 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN317-S Chr4 6945153 6945158 0 0 Deletion 5 FN317-S Chr4 7757663 7757688 0 0 Deletion 25 FN317-S Chr5 26904105 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN317-S Chr5 27200736 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN317-S Chr5 27347158 29208238 0 0 Inversion 1861080 FN317-S Chr5 27353896 29208190 0 0 Inversion 1854294 LOC_Os05g47750 Ser/Thr protein kinase, putative, expressed FN317-S Chr6 20932545 20932560 0 0 Deletion 15 FN317-S Chr6 26432738 26432747 0 0 Deletion 9 FN317-S Chr6 28032019 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN317-S Chr6 8755176 8755195 0 0 Deletion 19 FN317-S Chr7 25374726 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g42400 transposon protein, putative, unclassified, expressed FN317-S Chr7 7686451 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN317-S Chr8 19345604 19345605 0 0 Deletion 1 FN317-S Chr8 20764814 20764816 0 0 Deletion 2 FN317-S Chr8 2095810 2095827 0 0 Deletion 17 FN317-S Chr8 28391251 28391263 0 0 Deletion 12 FN317-S Chr9 15154269 15154273 0 0 Deletion 4 FN317-S Chr9 6488001 6503000 0 0 Deletion 15000 LOC_Os09g11620 retrotransposon protein, putative, Ty3-gypsy subclass FN317-S Chr9 6488001 6503000 0 0 Deletion 15000 LOC_Os09g11630 retrotransposon protein, putative, unclassified, expressed FN317-S Chr9 6488001 6503000 0 0 Deletion 15000 LOC_Os09g11640 retrotransposon protein, putative, unclassified, expressed FN317-S Chr9 6488001 6503000 0 0 Deletion 15000 LOC_Os09g11650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed