FN3173-S Chr1 14258265 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3173-S Chr1 24089903 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3173-S Chr1 24776029 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g43340 retrotransposon protein, putative, unclassified, expressed FN3173-S Chr1 34684085 35165282 0 0 Inversion 481197 FN3173-S Chr1 35032151 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60820 hypothetical protein FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60830 expressed protein FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60850 expressed protein FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60860 spotted leaf 11, putative, expressed FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60870 expressed protein FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60880 transposon protein, putative, unclassified, expressed FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60890 expressed protein FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60900 expressed protein FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60910 CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60920 OsFBX30 - F-box domain containing protein, expressed FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60930 expressed protein FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60940 expressed protein FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60960 DUF260 domain containing protein, putative, expressed FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60970 transposon protein, putative, unclassified, expressed FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g60980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3173-S Chr1 35168001 35281000 0 0 Deletion 112999 LOC_Os01g61590 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN3173-S Chr1 36911402 36911403 0 0 Deletion 1 downstream_gene_variant HET FN3173-S Chr1 7612057 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3173-S Chr1 9910432 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3173-S Chr10 10067467 10067472 0 0 Deletion 5 downstream_gene_variant HET FN3173-S Chr10 11067001 11132000 0 0 Deletion 64999 LOC_Os10g21620 expressed protein FN3173-S Chr10 11067001 11132000 0 0 Deletion 64999 LOC_Os10g21630 hypothetical protein FN3173-S Chr10 11067001 11132000 0 0 Deletion 64999 LOC_Os10g21640 expressed protein FN3173-S Chr10 11067001 11132000 0 0 Deletion 64999 LOC_Os10g21660 FAD binding protein, putative, expressed FN3173-S Chr10 11067001 11132000 0 0 Deletion 64999 LOC_Os10g21670 dehydration stress-induced protein, putative, expressed FN3173-S Chr10 11067001 11132000 0 0 Deletion 64999 LOC_Os10g21690 EDA28/MEE23, putative, expressed FN3173-S Chr10 11067001 11132000 0 0 Deletion 64999 LOC_Os10g21700 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3173-S Chr10 19553001 19579000 0 0 Deletion 25999 LOC_Os10g36580 UP-9A, putative, expressed FN3173-S Chr10 19553001 19579000 0 0 Deletion 25999 LOC_Os10g36590 retrotransposon protein, putative, unclassified, expressed FN3173-S Chr10 19553001 19579000 0 0 Deletion 25999 LOC_Os10g37330 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN3173-S Chr10 5132357 5132357 0 0 Insertion 2 upstream_gene_variant HET FN3173-S Chr11 12113202 12113205 0 0 Deletion 3 intergenic_region HET FN3173-S Chr11 14281294 14281295 0 0 Deletion 1 upstream_gene_variant HET FN3173-S Chr11 15949080 Chr7 18864237 0 Translocation 0 FN3173-S Chr11 16997641 Chr2 474781 0 Translocation 0 FN3173-S Chr11 23449558 Chr8 16435221 0 Translocation 0 FN3173-S Chr11 25273903 Chr7 5261743 0 Translocation 0 FN3173-S Chr11 27201548 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os11g44940 seed maturation protein PM27, putative, expressed FN3173-S Chr11 29010110 Chr3 31102190 0 Translocation 0 FN3173-S Chr11 8574326 8574326 0 0 Insertion 2 INTERGENIC HET FN3173-S Chr12 10602216 10602217 0 0 Deletion 1 downstream_gene_variant HET FN3173-S Chr12 11407707 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3173-S Chr12 11627775 11627775 0 0 Insertion 1 downstream_gene_variant HET FN3173-S Chr12 15479564 15479595 0 0 Deletion 31 upstream_gene_variant HET FN3173-S Chr12 17190586 17190587 0 0 Deletion 1 upstream_gene_variant HET FN3173-S Chr12 18233857 18233858 0 0 Deletion 1 upstream_gene_variant HET FN3173-S Chr12 23655329 23655329 0 0 Insertion 1 downstream_gene_variant HET FN3173-S Chr12 25137936 25137937 0 0 Deletion 1 upstream_gene_variant HET FN3173-S Chr12 27369172 27369173 0 0 Deletion 1 upstream_gene_variant HET FN3173-S Chr12 2846545 Chr1 5089752 0 Translocation 0 FN3173-S Chr12 2846555 Chr8 6395195 0 Translocation 0 FN3173-S Chr12 6818486 T-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os12g12380 transposon protein, putative, unclassified, expressed FN3173-S Chr12 7075554 7075554 0 0 Insertion 1 upstream_gene_variant HET FN3173-S Chr12 7151544 Chr7 5718372 0 Translocation 0 FN3173-S Chr12 9194535 9194558 0 0 Deletion 23 frameshift_variant HET LOC_Os12g16100 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3173-S Chr2 16826013 16826018 0 0 Deletion 5 INTERGENIC HET FN3173-S Chr2 2144828 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3173-S Chr2 28701737 28701753 0 0 Deletion 16 INTERGENIC HOMO FN3173-S Chr2 34129325 34129332 0 0 Deletion 7 upstream_gene_variant HET FN3173-S Chr2 6653368 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3173-S Chr3 12760119 12760119 0 0 Insertion 1 upstream_gene_variant HET FN3173-S Chr3 19282442 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3173-S Chr3 27574144 27574145 0 0 Deletion 1 INTERGENIC HOMO FN3173-S Chr3 35542269 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3173-S Chr4 10997482 10997482 0 0 Insertion 1 upstream_gene_variant HET FN3173-S Chr4 24444641 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3173-S Chr4 2988805 Chr1 29749623 0 Translocation 0 FN3173-S Chr4 31706754 31706757 0 0 Deletion 3 downstream_gene_variant HET FN3173-S Chr4 33037971 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g55530 retrotransposon protein, putative, unclassified, expressed FN3173-S Chr4 35219069 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3173-S Chr4 35219076 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3173-S Chr4 35219077 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3173-S Chr5 17848937 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3173-S Chr5 19880114 Chr4 13327661 0 Translocation 0 FN3173-S Chr5 21819200 21819211 0 0 Deletion 11 INTERGENIC HET FN3173-S Chr5 23760472 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN3173-S Chr5 2646234 2646235 0 0 Deletion 1 frameshift_variant HET LOC_Os05g05354 expressed protein FN3173-S Chr5 28360014 28360019 0 0 Deletion 5 INTERGENIC HOMO FN3173-S Chr5 4005290 4005290 0 0 Insertion 4 upstream_gene_variant HET FN3173-S Chr6 16164125 C-T 0 0 Single Base Substitution 0 INTRON HET FN3173-S Chr6 16378114 16378120 0 0 Deletion 6 upstream_gene_variant HET FN3173-S Chr6 24473281 24473286 0 0 Deletion 5 upstream_gene_variant HET FN3173-S Chr6 25334415 25334416 0 0 Deletion 1 downstream_gene_variant HET FN3173-S Chr6 7390721 7390721 0 0 Insertion 1 frameshift_variant HET LOC_Os06g13430 retrotransposon protein, putative, unclassified, expressed FN3173-S Chr7 17075242 17075242 0 0 Insertion 1 downstream_gene_variant HET FN3173-S Chr7 20854229 20854229 0 0 Insertion 1 upstream_gene_variant HET FN3173-S Chr7 22336532 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN3173-S Chr7 26494207 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN3173-S Chr7 4513023 A-C 0 0 Single Base Substitution 0 INTRON HET FN3173-S Chr7 5440087 Chr6 7372783 0 Translocation 0 FN3173-S Chr8 11235992 11235992 0 0 Insertion 1 downstream_gene_variant HET FN3173-S Chr8 12007575 Chr3 25764424 0 Translocation 0 FN3173-S Chr8 12820254 12820254 0 0 Insertion 1 upstream_gene_variant HET FN3173-S Chr8 14735495 14735505 0 0 Deletion 10 INTERGENIC HOMO FN3173-S Chr8 17787038 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3173-S Chr8 6990611 6990611 0 0 Insertion 1 frameshift_variant HET LOC_Os08g11920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3173-S Chr8 8497625 8497629 0 0 Deletion 4 downstream_gene_variant HET FN3173-S Chr8 9456138 9456139 0 0 Deletion 1 upstream_gene_variant HET FN3173-S Chr9 18623572 18623573 0 0 Deletion 1 upstream_gene_variant HET FN3173-S Chr9 21429693 21429693 0 0 Insertion 1 upstream_gene_variant HET