FN318-S Chr1 16821406 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN318-S Chr1 19069101 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr1 2160883 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN318-S Chr1 23843460 23843460 0 0 Insertion 1 LOC_Os01g42050 DNL zinc finger domain containing protein, putative, expressed FN318-S Chr1 26791066 26791069 0 0 Deletion 3 LOC_Os01g46940 sphingolipid C4-hydroxylase SUR2, putative, expressed FN318-S Chr1 40239284 40239285 0 0 Deletion 1 FN318-S Chr1 42263783 42263786 0 0 Deletion 3 FN318-S Chr1 8959275 8959275 0 0 Insertion 6 FN318-S Chr10 2761235 Chr1 26316067 0 Translocation 0 LOC_Os01g46280 expressed protein FN318-S Chr10 2761235 Chr1 26316067 0 Translocation 0 LOC_Os10g05560 expressed protein FN318-S Chr10 3607089 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr10 7107343 7107348 0 0 Deletion 5 LOC_Os10g12740 retrotransposon protein, putative, unclassified, expressed FN318-S Chr10 8892685 Chr7 24229874 0 Translocation 0 LOC_Os07g40420 hypothetical protein FN318-S Chr10 8892685 Chr7 24229874 0 Translocation 0 LOC_Os10g17600 hypothetical protein FN318-S Chr11 12965851 G-C 0 0 Single Base Substitution 0 INTRON HET FN318-S Chr11 17519776 17519776 0 0 Insertion 3 FN318-S Chr11 19039607 19039616 0 0 Deletion 9 FN318-S Chr11 20091630 C-A 0 0 Single Base Substitution 0 INTRON HET FN318-S Chr12 15059655 15059659 0 0 Deletion 4 FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g26980 THION40 - Plant thionin family protein precursor FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g26990 hypothetical protein FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27000 transposon protein, putative, CACTA, En/Spm sub-class FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27020 THION41 - Plant thionin family protein precursor, putative, expressed FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27025 expressed protein FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27030 expressed protein FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27040 expressed protein FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27050 retrotransposon protein, putative, Ty1-copia subclass, expressed FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27060 PPR repeat domain containing protein, putative, expressed FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27070 heat shock protein DnaJ, putative, expressed FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27080 expressed protein FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27090 expressed protein FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27096 retrotransposon protein, putative, Ty1-copia subclass, expressed FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27102 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27110 expressed protein FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27120 retrotransposon protein, putative, unclassified, expressed FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27130 retrotransposon protein, putative, Ty3-gypsy subclass FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27160 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27170 retrotransposon protein, putative, Ty3-gypsy subclass FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27180 retrotransposon protein, putative, Ty3-gypsy subclass FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27190 expressed protein FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27200 expressed protein FN318-S Chr12 15804001 15966000 0 0 Deletion 162000 LOC_Os12g27210 expressed protein FN318-S Chr12 17052427 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr12 21526984 21526985 0 0 Deletion 1 LOC_Os12g35395 expressed protein FN318-S Chr12 2682141 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr2 10301344 10302882 0 0 Deletion 1538 LOC_Os02g17810 retrotransposon protein, putative, unclassified, expressed FN318-S Chr2 10301344 10302882 0 0 Deletion 1538 LOC_Os02g17820 retrotransposon protein, putative, unclassified, expressed FN318-S Chr2 10302858 Chr1 18771745 0 Translocation 0 LOC_Os01g34080 armadillo/beta-catenin-like repeat family protein, expressed FN318-S Chr2 10302858 Chr1 18771745 0 Translocation 0 LOC_Os02g17820 retrotransposon protein, putative, unclassified, expressed FN318-S Chr2 11320497 11320498 0 0 Deletion 1 FN318-S Chr2 23905598 23905602 0 0 Deletion 4 FN318-S Chr2 2808931 2808932 0 0 Deletion 1 FN318-S Chr2 4679216 4679217 0 0 Deletion 1 FN318-S Chr2 4927911 4927913 0 0 Deletion 2 LOC_Os02g09569 retrotransposon protein, putative, Ty3-gypsy subclass FN318-S Chr2 9193123 9193123 0 0 Insertion 1 FN318-S Chr3 11630960 11630973 0 0 Deletion 13 LOC_Os03g20530 DUF630/DUF632 domains containing protein, putative, expressed FN318-S Chr3 12344364 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr3 14203282 14203292 0 0 Deletion 10 FN318-S Chr3 26326463 C-G 0 0 Single Base Substitution 0 INTRON HET FN318-S Chr3 27879587 27879594 0 0 Deletion 7 FN318-S Chr3 33276672 33276674 0 0 Deletion 2 FN318-S Chr3 5324649 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN318-S Chr3 6480310 6480311 0 0 Deletion 1 FN318-S Chr3 6527757 6527758 0 0 Deletion 1 FN318-S Chr4 17277359 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN318-S Chr4 17429330 T-G 0 0 Single Base Substitution 0 INTRON HOMO FN318-S Chr4 23567991 23567991 0 0 Insertion 2 FN318-S Chr4 23925865 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr4 26999151 26999158 0 0 Deletion 7 FN318-S Chr4 2720105 2720108 0 0 Deletion 3 FN318-S Chr4 27227829 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr4 27285748 27285803 0 0 Deletion 55 FN318-S Chr4 30394797 30394800 0 0 Deletion 3 FN318-S Chr4 30468888 A-G 0 0 Single Base Substitution 0 INTRON HET FN318-S Chr4 3480403 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g06600 retrotransposon protein, putative, unclassified, expressed FN318-S Chr4 5532590 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr4 7301071 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN318-S Chr4 979266 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr5 14188232 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN318-S Chr5 24899725 24899764 0 0 Deletion 39 FN318-S Chr5 4161502 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g07730 retrotransposon protein, putative, unclassified, expressed FN318-S Chr5 7407791 7407799 0 0 Deletion 8 FN318-S Chr5 7674228 7674242 0 0 Deletion 14 FN318-S Chr6 20794617 20794623 0 0 Deletion 6 FN318-S Chr6 28486128 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN318-S Chr6 6394367 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN318-S Chr6 7209066 Chr5 11443231 0 Translocation 0 FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17600 retrotransposon protein, putative, Ty3-gypsy subclass FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17610 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17630 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17640 transposon protein, putative, unclassified, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17650 retrotransposon protein, putative, unclassified FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17660 retrotransposon protein, putative, unclassified FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17670 retrotransposon protein, putative, unclassified, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17680 ribosomal RNA apurinic site specific lyase, putative FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17689 expressed protein FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17700 retrotransposon protein, putative, unclassified FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17720 retrotransposon protein, putative, Ty3-gypsy subclass FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17730 retrotransposon protein, putative, unclassified FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17740 expressed protein FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17750 retrotransposon protein, putative, unclassified, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17760 expressed protein FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17770 tryptophanyl-tRNA synthetase, cytoplasmic, putative, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17780 transposon protein, putative, unclassified, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17790 retrotransposon protein, putative, Ty3-gypsy subclass FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17820 transposon protein, putative, unclassified, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17830 retrotransposon protein, putative, unclassified, expressed FN318-S Chr7 10379001 10564000 0 0 Deletion 185000 LOC_Os07g17840 transposon protein, putative, unclassified, expressed FN318-S Chr7 10539166 Chr2 23019808 0 Translocation 0 LOC_Os07g17810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr7 16690500 16690509 0 0 Deletion 9 LOC_Os07g28510 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr7 19660493 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN318-S Chr7 21206235 21206242 0 0 Deletion 7 FN318-S Chr7 2378126 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr7 2378127 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr7 26285953 26285955 0 0 Deletion 2 FN318-S Chr7 29021001 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr7 29021002 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr7 9730289 9730303 0 0 Deletion 14 LOC_Os07g16590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN318-S Chr8 16256240 16256240 0 0 Insertion 4 FN318-S Chr8 19933281 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr8 24853587 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr8 26028120 26028121 0 0 Deletion 1 FN318-S Chr8 3263114 3263114 0 0 Insertion 4 FN318-S Chr8 3445402 3445431 0 0 Deletion 29 FN318-S Chr8 8314448 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN318-S Chr8 8328047 8328058 0 0 Deletion 11 LOC_Os08g13920 glycosyl hydrolases family 16, putative, expressed FN318-S Chr8 8649693 8649694 0 0 Deletion 1 FN318-S Chr9 22056638 T-C 0 0 Single Base Substitution 0 INTRON HET FN318-S Chr9 22797335 22810198 0 0 Deletion 12863 LOC_Os09g39740 ACT domain containing protein, expressed FN318-S Chr9 22797335 22810198 0 0 Deletion 12863 LOC_Os09g39750 domain of unknown function DUF966 domain containing protein, expressed FN318-S Chr9 22797335 22810198 0 0 Deletion 12863 LOC_Os09g39754 expressed protein FN318-S Chr9 22797335 22810198 0 0 Deletion 12863 LOC_Os09g39760 pectinesterase, putative, expressed FN318-S Chr9 22797335 22810198 0 0 Deletion 12863 LOC_Os09g39770 C2 domain containing protein, putative, expressed FN318-S Chr9 22797335 22810198 0 0 Deletion 12863 LOC_Os09g39780 peptidyl-prolyl cis-trans isomerase, putative, expressed FN318-S Chr9 22812613 22813779 0 0 Deletion 1166 LOC_Os09g39790 lipase, putative, expressed FN318-S Chr9 7135477 8290316 0 0 Inversion 1154839 LOC_Os09g12480 ulp1 protease family, C-terminal catalytic domain containing protein, expressed