FN3194-S Chr1 14702001 14741000 0 0 Deletion 38999 LOC_Os01g25920 expressed protein FN3194-S Chr1 14702001 14741000 0 0 Deletion 38999 LOC_Os01g25930 retrotransposon protein, putative, unclassified, expressed FN3194-S Chr1 14702001 14741000 0 0 Deletion 38999 LOC_Os01g25940 expressed protein FN3194-S Chr1 14702001 14741000 0 0 Deletion 38999 LOC_Os01g25950 retrotransposon protein, putative, Ty3-gypsy subclass FN3194-S Chr1 14702001 14741000 0 0 Deletion 38999 LOC_Os01g25960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3194-S Chr1 14702001 14741000 0 0 Deletion 38999 LOC_Os01g25970 retrotransposon protein, putative, Ty1-copia subclass FN3194-S Chr1 14702001 14741000 0 0 Deletion 38999 LOC_Os01g25980 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3194-S Chr1 14702001 14741000 0 0 Deletion 38999 LOC_Os01g25990 expressed protein FN3194-S Chr1 14702001 14741000 0 0 Deletion 38999 LOC_Os01g26340 dirigent, putative FN3194-S Chr1 20189183 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr1 21619168 21619169 0 0 Deletion 1 downstream_gene_variant HET FN3194-S Chr1 26815761 26815773 0 0 Deletion 12 INTRON HET FN3194-S Chr1 27333156 27333171 0 0 Deletion 15 INTERGENIC HOMO FN3194-S Chr1 30432103 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3194-S Chr1 33697359 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g58300 expressed protein FN3194-S Chr1 9526192 9526193 0 0 Deletion 1 UTR_5_PRIME HOMO FN3194-S Chr10 3311793 3311793 0 0 Insertion 1 upstream_gene_variant HET FN3194-S Chr10 4000832 4000832 0 0 Insertion 1 downstream_gene_variant HET FN3194-S Chr11 10867246 Chr2 24386435 0 Translocation 0 FN3194-S Chr11 11862264 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g20480 expressed protein FN3194-S Chr11 12108413 12108414 0 0 Deletion 1 intergenic_region HET FN3194-S Chr11 24439231 Chr5 21302443 0 Translocation 0 FN3194-S Chr11 25113043 25113043 0 0 Insertion 8 upstream_gene_variant HET FN3194-S Chr11 2642181 C-T 0 0 Single Base Substitution 0 INTRON HET FN3194-S Chr11 27818912 27818916 0 0 Deletion 4 INTERGENIC HET FN3194-S Chr11 6128307 Chr3 28273912 0 Translocation 0 FN3194-S Chr11 6602449 6911011 0 0 Inversion 308562 LOC_Os11g11890 protein kinase domain containing protein, expressed FN3194-S Chr11 687122 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN3194-S Chr12 10628773 Chr6 17675288 0 Translocation 0 FN3194-S Chr12 22431851 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr12 23238910 Chr6 6426501 0 Translocation 0 LOC_Os12g37830 transposon protein, putative, unclassified, expressed FN3194-S Chr2 16518661 16518684 0 0 Deletion 23 upstream_gene_variant HET FN3194-S Chr2 18715630 18715631 0 0 Deletion 1 INTRON HET FN3194-S Chr2 28759565 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr2 3950069 3950075 0 0 Deletion 6 INTERGENIC HOMO FN3194-S Chr2 593347 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3194-S Chr2 6142977 6142979 0 0 Deletion 2 INTERGENIC HOMO FN3194-S Chr2 7414061 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr3 10160033 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr3 15873001 15880000 0 0 Deletion 6999 LOC_Os03g27700 expressed protein FN3194-S Chr3 15873001 15880000 0 0 Deletion 6999 LOC_Os03g28175 expressed protein FN3194-S Chr3 16059602 16059603 0 0 Deletion 1 INTERGENIC HOMO FN3194-S Chr3 16753136 16753141 0 0 Deletion 5 INTRON HOMO FN3194-S Chr3 19362931 19362937 0 0 Deletion 6 upstream_gene_variant HET FN3194-S Chr3 25317181 25317187 0 0 Deletion 6 UTR_3_PRIME HET FN3194-S Chr3 30735457 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr3 36352052 36352054 0 0 Deletion 2 FRAME_SHIFT HET LOC_Os03g64320 expressed protein FN3194-S Chr3 5128273 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr3 957748 G-T 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN3194-S Chr4 13564858 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr4 17789704 17789728 0 0 Deletion 24 INTERGENIC HOMO FN3194-S Chr4 28412923 28412934 0 0 Deletion 11 INTRON HET FN3194-S Chr4 8866861 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr5 13296389 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g23290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3194-S Chr5 15597443 15597443 0 0 Insertion 1 intergenic_region HET FN3194-S Chr5 19511088 19511089 0 0 Deletion 1 INTRON HET FN3194-S Chr5 20698566 Chr3 35705575 0 Translocation 0 FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37600 glycerol-3-phosphate acyltransferase, putative, expressed FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37610 expressed protein FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37620 retrotransposon protein, putative, unclassified, expressed FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37630 expressed protein FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37640 expressed protein FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37650 expressed protein FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37660 transferase family protein, putative, expressed FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37670 retrotransposon protein, putative, unclassified, expressed FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37680 transposon protein, putative, unclassified, expressed FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37690 OsFBL23 - F-box domain and LRR containing protein, expressed FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37700 periplasmic beta-glucosidase precursor, putative, expressed FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37710 expressed protein FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37720 expressed protein FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37730 MYB family transcription factor, putative, expressed FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37740 retrotransposon protein, putative, unclassified FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37750 retrotransposon protein, putative, unclassified, expressed FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37760 retrotransposon protein, putative, unclassified, expressed FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37770 expressed protein FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g37780 expressed protein FN3194-S Chr5 21998001 22127000 0 0 Deletion 128999 LOC_Os05g38400 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed FN3194-S Chr5 24538902 G-T 0 0 Single Base Substitution 0 INTRON HET FN3194-S Chr5 3369041 3369047 0 0 Deletion 6 UTR_5_PRIME HOMO FN3194-S Chr5 531791 Chr1 34497365 0 Translocation 0 FN3194-S Chr5 818597 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3194-S Chr6 10303135 10303135 0 0 Insertion 1 upstream_gene_variant HET FN3194-S Chr6 14208625 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr6 25334967 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g42200 retrotransposon protein, putative, unclassified, expressed FN3194-S Chr6 30046209 30046215 0 0 Deletion 6 INTERGENIC HOMO FN3194-S Chr6 7085563 C-A 0 0 Single Base Substitution 0 INTRON HET FN3194-S Chr6 98089 T-A 0 0 Single Base Substitution 0 INTRON HET FN3194-S Chr7 21509741 21509749 0 0 Deletion 8 INTERGENIC HOMO FN3194-S Chr7 27218674 T-C 0 0 Single Base Substitution 0 INTRON HET FN3194-S Chr7 5336464 5336465 0 0 Deletion 1 upstream_gene_variant HET FN3194-S Chr8 14219760 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g23480 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3194-S Chr8 8734082 Chr1 19943859 0 Translocation 0 FN3194-S Chr9 10653692 10653730 0 0 Deletion 38 frameshift_variant HET LOC_Os09g17410 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3194-S Chr9 15865264 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr9 16146205 16146205 0 0 Insertion 10 upstream_gene_variant HET FN3194-S Chr9 18368652 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr9 20223833 20223840 0 0 Deletion 7 UTR_3_PRIME HET FN3194-S Chr9 6173126 C-T 0 0 Single Base Substitution 0 UTR_5_PRIME HET FN3194-S Chr9 6875466 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3194-S Chr9 8036278 8036304 0 0 Deletion 26 downstream_gene_variant HET