FN3202-S Chr1 14045450 14045450 0 0 Insertion 12 upstream_gene_variant HET FN3202-S Chr1 21760214 21760224 0 0 Deletion 10 INTRON HET FN3202-S Chr1 26237238 A-T 0 0 Single Base Substitution 0 INTRON HET FN3202-S Chr1 39447446 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr1 41773949 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr10 1021920 1021921 0 0 Deletion 1 FRAME_SHIFT HET LOC_Os10g02640 expressed protein FN3202-S Chr10 18795001 18821000 0 0 Deletion 25999 LOC_Os10g35200 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed FN3202-S Chr10 18795001 18821000 0 0 Deletion 25999 LOC_Os10g35210 expressed protein FN3202-S Chr10 18795001 18821000 0 0 Deletion 25999 LOC_Os10g35220 KH domain containing protein, putative, expressed FN3202-S Chr10 18795001 18821000 0 0 Deletion 25999 LOC_Os11g06130 PHD-finger family protein, expressed FN3202-S Chr10 18798121 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g35190 ZOS10-06 - C2H2 zinc finger protein, expressed FN3202-S Chr10 2922064 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g05790 POEI4 - Pollen Ole e I allergen and extensin family protein precursor, expressed FN3202-S Chr11 10556833 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr11 19200649 Chr9 4333986 0 Translocation 0 FN3202-S Chr11 21854507 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g37020 retrotransposon protein, putative, unclassified, expressed FN3202-S Chr11 5087741 5087789 0 0 Deletion 48 splice_region_variant&intron_variant HET FN3202-S Chr11 8438800 8438802 0 0 Deletion 2 INTERGENIC HET FN3202-S Chr12 11143037 11143044 0 0 Deletion 7 FRAME_SHIFT HOMO LOC_Os12g19190 transposon protein, putative, CACTA, En/Spm sub-class FN3202-S Chr12 16443370 16443371 0 0 Deletion 1 upstream_gene_variant HET FN3202-S Chr12 25059689 25059689 0 0 Insertion 22 upstream_gene_variant HET FN3202-S Chr12 26067241 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr12 6924707 7141360 0 0 Inversion 216653 FN3202-S Chr12 6924756 7141365 0 0 Inversion 216609 FN3202-S Chr12 7132017 T-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN3202-S Chr2 12949264 12949264 0 0 Insertion 2 INTERGENIC HET FN3202-S Chr2 13565376 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g22780 T-complex protein, putative, expressed FN3202-S Chr2 13567123 13567132 0 0 Deletion 9 INTERGENIC HET FN3202-S Chr2 18822027 18822027 0 0 Insertion 1 upstream_gene_variant HET FN3202-S Chr2 18944270 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr2 18969464 18969464 0 0 Insertion 3 CODON_INSERTION HET LOC_Os02g32100 retrotransposon protein, putative, unclassified, expressed FN3202-S Chr2 21010276 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr2 2427553 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr2 26544654 26544785 0 0 Inversion 131 FN3202-S Chr2 29987904 29988184 0 0 Inversion 280 FN3202-S Chr2 9240368 9240597 0 0 Inversion 229 LOC_Os02g16260 xa1, putative, expressed FN3202-S Chr2 9382376 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr3 15818852 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3202-S Chr3 15818853 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3202-S Chr3 19722377 19722390 0 0 Deletion 13 INTERGENIC HOMO FN3202-S Chr3 19773713 T-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3202-S Chr3 23095183 23095186 0 0 Deletion 3 CODON_DELETION HET LOC_Os03g41530 single-stranded DNA-binding protein, putative, expressed FN3202-S Chr3 25527866 25527866 0 0 Insertion 28 upstream_gene_variant HET FN3202-S Chr3 5776600 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr3 5776605 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr3 5776613 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr4 14372793 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN3202-S Chr4 1568604 C-T 0 0 Single Base Substitution 0 INTRON HET FN3202-S Chr4 17513624 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr4 3516912 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr4 3516913 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr4 9226723 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN3202-S Chr5 18228919 18228928 0 0 Deletion 9 CODON_DELETION HET LOC_Os05g31360 expressed protein FN3202-S Chr5 20426915 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr5 21863696 21863697 0 0 Deletion 1 upstream_gene_variant HET FN3202-S Chr5 29941679 29941680 0 0 Deletion 1 intergenic_region HET FN3202-S Chr5 4841108 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr5 9196706 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr6 4568925 4568948 0 0 Deletion 23 downstream_gene_variant HET FN3202-S Chr6 7661209 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr6 9408103 9408106 0 0 Deletion 3 UTR_3_PRIME HET FN3202-S Chr7 11015001 11030000 0 0 Deletion 14999 LOC_Os07g18660 hypothetical protein FN3202-S Chr7 11015001 11030000 0 0 Deletion 14999 LOC_Os07g18820 hypothetical protein FN3202-S Chr7 13076809 Chr6 28120968 0 Translocation 0 LOC_Os07g23200 F-actin-capping protein subunit alpha, putative, expressed FN3202-S Chr7 17560179 17560179 0 0 Insertion 2 INTRON HET FN3202-S Chr7 18526783 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3202-S Chr7 25697836 T-C 0 0 Single Base Substitution 0 INTRON HET FN3202-S Chr7 26170120 26170121 0 0 Deletion 1 UTR_5_PRIME HET FN3202-S Chr7 5056001 5093000 0 0 Deletion 36999 LOC_Os07g09570 hypothetical protein FN3202-S Chr7 5056001 5093000 0 0 Deletion 36999 LOC_Os07g09580 aminoacyl-tRNA synthetase, putative, expressed FN3202-S Chr7 5056001 5093000 0 0 Deletion 36999 LOC_Os07g09590 bHLH transcription factor, putative, expressed FN3202-S Chr7 5056001 5093000 0 0 Deletion 36999 LOC_Os07g12880 transposon protein, putative, Pong sub-class, expressed FN3202-S Chr7 5056154 5256982 0 0 Inversion 200828 FN3202-S Chr7 5093027 Chr6 28122203 0 Translocation 0 FN3202-S Chr8 10761998 10762000 0 0 Deletion 2 UTR_5_PRIME HOMO FN3202-S Chr8 18645766 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr8 21557800 21557803 0 0 Deletion 3 CODON_CHANGE_PLUS_CODON_DELETION HOMO LOC_Os08g34340 DUF593 domain containing protein, expressed FN3202-S Chr8 24519321 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3202-S Chr8 26516176 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr8 4668835 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3202-S Chr8 4669311 4669320 0 0 Deletion 9 INTERGENIC HET FN3202-S Chr8 8926577 Chr6 25354027 0 Translocation 0 FN3202-S Chr8 8927001 8998000 0 0 Deletion 70999 LOC_Os08g14850 resistance protein, putative, expressed FN3202-S Chr8 8927001 8998000 0 0 Deletion 70999 LOC_Os08g14860 cytochrome b-c1 complex subunit 7, putative, expressed FN3202-S Chr8 8927001 8998000 0 0 Deletion 70999 LOC_Os08g14870 hypothetical protein FN3202-S Chr8 8927001 8998000 0 0 Deletion 70999 LOC_Os08g14880 transposon protein, putative, unclassified, expressed FN3202-S Chr8 8927001 8998000 0 0 Deletion 70999 LOC_Os08g14890 expressed protein FN3202-S Chr8 8927001 8998000 0 0 Deletion 70999 LOC_Os08g14900 expressed protein FN3202-S Chr8 8927001 8998000 0 0 Deletion 70999 LOC_Os08g14910 expressed protein FN3202-S Chr8 8927001 8998000 0 0 Deletion 70999 LOC_Os08g14920 expressed protein FN3202-S Chr8 8927001 8998000 0 0 Deletion 70999 LOC_Os08g14930 hypothetical protein FN3202-S Chr8 8927001 8998000 0 0 Deletion 70999 LOC_Os08g18860 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3202-S Chr8 8998124 Chr6 25353075 0 Translocation 0 FN3202-S Chr9 11354282 11354282 0 0 Insertion 14 upstream_gene_variant HET FN3202-S Chr9 13996825 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27500 cytochrome P450, putative, expressed FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27510 cytochrome P450, putative, expressed FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27520 expressed protein FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27530 expressed protein FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27540 C2 domain containing protein, expressed FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27550 expressed protein FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27560 expressed protein FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27570 OsFBA3 - F-box and FBA domain containing protein, expressed FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27580 potassium transporter, putative, expressed FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27590 expressed protein FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27610 expressed protein FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27620 PHD-finger domain containing protein, putative, expressed FN3202-S Chr9 16701001 16797000 0 0 Deletion 95999 LOC_Os09g27640 retrotransposon protein, putative, unclassified FN3202-S Chr9 16739566 16739567 0 0 Deletion 1 upstream_gene_variant HET FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27650 ZOS9-14 - C2H2 zinc finger protein, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27660 OsFBO21 - F-box and other domain containing protein, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27670 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27680 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27690 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27700 microtubule associated protein, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27710 pollen allergen Cyn d 23, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27720 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27730 HVA22, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27734 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27740 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27744 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27750 1-aminocyclopropane-1-carboxylate oxidase 1, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27760 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27770 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27780 retrotransposon protein, putative, unclassified, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27795 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27800 retrotransposon protein, putative, unclassified, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27810 retrotransposon protein, putative, unclassified FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27820 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27830 OsPDIL2-3 protein disulfide isomerase PDIL2-3, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27840 transposon protein, putative, unclassified, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27850 transcription regulator, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27860 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27870 hypothetical protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27880 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27890 lysM domain-containing GPI-anchored protein precursor, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27900 plastidic glucose transporter 1, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27910 aspartic proteinase nepenthesin precursor, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27920 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27930 ubiquitin fusion protein, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27940 aspartic proteinase nepenthesin-1 precursor, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27950 galactosyltransferase, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27960 transmembrane protein 50A, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27970 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27980 emp24/gp25L/p24 family protein, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g27990 annexin, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28000 OsSigP6 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28019 nucleoporin p58/p45, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28040 OsPOP18 - Putative Prolyl Oligopeptidase homologue, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28050 asparate aminotransferase, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28060 MORN repeat domain containing protein, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28070 retrotransposon protein, putative, unclassified, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28080 retrotransposon protein, putative, unclassified, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28090 retrotransposon protein, putative, Ty3-gypsy subclass FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28100 OsRhmbd15 - Putative Rhomboid homologue, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28110 hydroxyproline-rich glycoprotein family protein, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28120 OsFBX330 - F-box domain containing protein, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28130 carbonic anhydrase family protein, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28140 retrotransposon protein, putative, unclassified FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28150 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28160 phosphate carrier protein, mitochondrial precursor, putative, expressed FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28170 expressed protein FN3202-S Chr9 16801001 17106000 0 0 Deletion 304999 LOC_Os09g28180 D-mannose binding lectin family protein, expressed FN3202-S Chr9 19095800 19095800 0 0 Insertion 16 downstream_gene_variant HET FN3202-S Chr9 2007884 2007887 0 0 Deletion 3 CODON_CHANGE_PLUS_CODON_DELETION HET LOC_Os09g03939 white-brown complex homolog protein 11, putative, expressed FN3202-S Chr9 21664146 T-A 0 0 Single Base Substitution 0 INTRON HET FN3202-S Chr9 4984052 4984058 0 0 Deletion 6 INTERGENIC HET FN3202-S Chr9 7607268 7607269 0 0 Deletion 1 upstream_gene_variant HET FN3202-S Chr9 9316996 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3202-S Chr9 9768729 9768729 0 0 Insertion 6 INTERGENIC HET