FN3216-S Chr1 12283322 12283323 0 0 Deletion 1 INTERGENIC HET FN3216-S Chr1 17473098 17473099 0 0 Deletion 1 upstream_gene_variant HET FN3216-S Chr1 31077258 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g54030 NADP-dependent malic enzyme, putative, expressed FN3216-S Chr1 31851704 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr1 5943189 5943189 0 0 Insertion 3 upstream_gene_variant HET FN3216-S Chr10 20845131 20845138 0 0 Deletion 7 UTR_3_PRIME HOMO FN3216-S Chr10 87041 87041 0 0 Insertion 98 upstream_gene_variant HET FN3216-S Chr11 12351117 12351117 0 0 Insertion 4 intergenic_region HET FN3216-S Chr11 13498036 Chr1 9838081 0 Translocation 0 FN3216-S Chr11 13593872 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3216-S Chr11 15924884 15924888 0 0 Deletion 4 downstream_gene_variant HET FN3216-S Chr11 17228528 17228536 0 0 Deletion 8 INTERGENIC HOMO FN3216-S Chr11 18915498 18915503 0 0 Deletion 5 INTERGENIC HOMO FN3216-S Chr11 19578565 19578569 0 0 Deletion 4 INTERGENIC HOMO FN3216-S Chr11 7679405 7679416 0 0 Deletion 11 INTRON HET FN3216-S Chr12 10499530 G-A 0 0 Single Base Substitution 0 INTRON HET FN3216-S Chr12 16674017 16674018 0 0 Deletion 1 upstream_gene_variant HET FN3216-S Chr12 17878258 17878258 0 0 Insertion 1 upstream_gene_variant HET FN3216-S Chr12 19928397 19928397 0 0 Insertion 1 3_prime_UTR_variant HET FN3216-S Chr12 20997867 20997891 0 0 Deletion 24 INTERGENIC HOMO FN3216-S Chr12 22022157 Chr4 15489069 0 Translocation 0 FN3216-S Chr12 23857679 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr12 6601194 6601194 0 0 Insertion 1 upstream_gene_variant HET FN3216-S Chr12 6696620 6696620 0 0 Insertion 4 upstream_gene_variant HET FN3216-S Chr2 22517040 22517041 0 0 Deletion 1 upstream_gene_variant HET FN3216-S Chr2 27356501 C-A 0 0 Single Base Substitution 0 INTRON HET FN3216-S Chr2 27811414 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr2 4891348 4891348 0 0 Insertion 2 upstream_gene_variant HET FN3216-S Chr3 17277458 T-G 0 0 Single Base Substitution 0 INTRON HET FN3216-S Chr3 19967843 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr3 30627609 30627617 0 0 Deletion 8 INTERGENIC HOMO FN3216-S Chr3 34562692 34562694 0 0 Deletion 2 upstream_gene_variant HET FN3216-S Chr3 6915234 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr4 19610517 19610523 0 0 Deletion 6 CODON_DELETION HET LOC_Os04g32580 expressed protein FN3216-S Chr4 28689865 C-T 0 0 Single Base Substitution 0 INTRON HET FN3216-S Chr4 2872949 2873059 0 0 Deletion 110 upstream_gene_variant HET FN3216-S Chr4 4335343 4335344 0 0 Deletion 1 upstream_gene_variant HET FN3216-S Chr4 5782414 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr4 6651100 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr4 8684439 8684439 0 0 Insertion 1 downstream_gene_variant HET FN3216-S Chr5 10722802 Chr4 26530139 0 Translocation 0 FN3216-S Chr5 11146517 11146517 0 0 Insertion 3 downstream_gene_variant HET FN3216-S Chr5 17779721 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3216-S Chr5 20582313 Chr3 7512118 0 Translocation 0 LOC_Os03g13850 cell cycle checkpoint protein RAD17, putative, expressed FN3216-S Chr5 23813358 23813397 0 0 Deletion 39 upstream_gene_variant HET FN3216-S Chr5 24974964 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr5 26137898 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g44960 expressed protein FN3216-S Chr5 6063009 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr5 6639963 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr5 9260889 A-G 0 0 Single Base Substitution 0 INTRON HET FN3216-S Chr6 10742831 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr6 14860784 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g25370 retrotransposon protein, putative, unclassified FN3216-S Chr6 15012670 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr6 17676341 A-C 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN3216-S Chr6 17884405 17884405 0 0 Insertion 1 downstream_gene_variant HET FN3216-S Chr6 18092647 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr6 22208177 Chr4 14979951 0 Translocation 0 FN3216-S Chr6 23487453 23487453 0 0 Insertion 41 downstream_gene_variant HET FN3216-S Chr6 25615439 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g42590 retrotransposon protein, putative, unclassified, expressed FN3216-S Chr6 26366932 T-C 0 0 Single Base Substitution 0 INTRON HET FN3216-S Chr6 28823963 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr6 8058358 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr6 9953444 9953444 0 0 Insertion 1 upstream_gene_variant HET FN3216-S Chr7 11637981 Chr4 9582342 0 Translocation 0 FN3216-S Chr7 11746773 G-A 0 0 Single Base Substitution 0 INTRON HET FN3216-S Chr7 13436038 13436039 0 0 Deletion 1 INTERGENIC HOMO FN3216-S Chr7 21070866 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr7 24028455 24028456 0 0 Deletion 1 downstream_gene_variant HET FN3216-S Chr7 2756893 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr7 4027222 4027225 0 0 Deletion 3 UTR_3_PRIME HOMO FN3216-S Chr7 6237197 Chr3 2806726 0 Translocation 0 FN3216-S Chr8 10338113 10338114 0 0 Deletion 1 downstream_gene_variant HET FN3216-S Chr8 13609356 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3216-S Chr8 16858425 16858425 0 0 Insertion 96 upstream_gene_variant HET FN3216-S Chr8 17273940 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr8 23134917 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3216-S Chr8 23407499 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr8 25824153 25824153 0 0 Insertion 2 INTERGENIC HET FN3216-S Chr9 13830370 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr9 20281658 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3216-S Chr9 4378223 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3216-S Chr9 4615970 4615972 0 0 Deletion 2 downstream_gene_variant HET FN3216-S Chr9 534523 534523 0 0 Insertion 1 frameshift_variant HET LOC_Os09g01770 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3216-S Chr9 5675870 5675878 0 0 Deletion 8 INTERGENIC HOMO