FN3226-S Chr1 20424445 20424445 0 0 Insertion 2 downstream_gene_variant HET FN3226-S Chr1 22675380 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr1 27436600 27436601 0 0 Deletion 1 upstream_gene_variant HET FN3226-S Chr1 4201092 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3226-S Chr1 4391462 C-A 0 0 Single Base Substitution 0 INTRON HET FN3226-S Chr1 7112249 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr1 7515519 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr1 8352482 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr10 15441936 15441937 0 0 Deletion 1 upstream_gene_variant HET FN3226-S Chr10 5032981 5032982 0 0 Deletion 1 INTRON HOMO FN3226-S Chr10 8430439 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr11 12598292 G-A 0 0 Single Base Substitution 0 INTRON HET FN3226-S Chr11 26392009 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr11 636511 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr11 7843612 7843613 0 0 Deletion 1 frameshift_variant HET LOC_Os11g14090 retrotransposon protein, putative, unclassified, expressed FN3226-S Chr12 11862700 Chr4 22897697 0 Translocation 0 LOC_Os12g20310 sarcoma antigen NY-SAR-91, putative, expressed FN3226-S Chr12 13965704 13965705 0 0 Deletion 1 upstream_gene_variant HET FN3226-S Chr12 21913586 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr12 25626078 26502953 0 0 Inversion 876875 LOC_Os12g41350 meiotic asynaptic mutant 1, putative, expressed FN3226-S Chr12 25626078 26502953 0 0 Inversion 876875 LOC_Os12g42640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3226-S Chr12 25626080 26502955 0 0 Inversion 876875 LOC_Os12g41350 meiotic asynaptic mutant 1, putative, expressed FN3226-S Chr12 25626080 26502955 0 0 Inversion 876875 LOC_Os12g42640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3226-S Chr12 26973331 26973401 0 0 Deletion 70 splice_donor_variant&inframe_deletion&splice_region_variant&intron_variant HET LOC_Os12g43480 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3226-S Chr12 3743507 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr2 19468327 19468331 0 0 Deletion 4 FRAME_SHIFT HOMO LOC_Os02g32780 pentatricopeptide, putative, expressed FN3226-S Chr2 21578376 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3226-S Chr2 24666299 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr2 3150491 3457300 0 0 Inversion 306809 LOC_Os02g06840 galactosyltransferase, putative, expressed FN3226-S Chr2 3150497 3457306 0 0 Inversion 306809 LOC_Os02g06840 galactosyltransferase, putative, expressed FN3226-S Chr2 33529005 33529006 0 0 Deletion 1 upstream_gene_variant HET FN3226-S Chr2 653470 C-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3226-S Chr2 7392410 7392412 0 0 Deletion 2 INTERGENIC HET FN3226-S Chr3 13009164 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr3 26936911 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g47590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3226-S Chr4 17881022 Chr1 36090932 0 Translocation 0 FN3226-S Chr4 31431454 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr4 34006449 Chr3 18216937 0 Translocation 0 FN3226-S Chr5 15367859 15367860 0 0 Deletion 1 upstream_gene_variant HET FN3226-S Chr5 19193609 Chr4 11717641 0 Translocation 0 FN3226-S Chr5 26773023 26773038 0 0 Deletion 15 CODON_DELETION HET LOC_Os05g46160 OsFBDUF29 - F-box and DUF domain containing protein, expressed FN3226-S Chr6 24137292 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3226-S Chr6 28539059 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g47070 retrotransposon protein, putative, unclassified, expressed FN3226-S Chr6 30884956 30884956 0 0 Insertion 2 INTERGENIC HET FN3226-S Chr6 31125283 31125459 0 0 Inversion 176 FN3226-S Chr6 6005372 Chr4 17919422 0 Translocation 0 FN3226-S Chr6 8268739 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3226-S Chr7 1171037 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3226-S Chr7 15466099 15466099 0 0 Insertion 1 upstream_gene_variant HET FN3226-S Chr7 18344261 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3226-S Chr7 21656133 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g36230 BTBN15 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed FN3226-S Chr7 24585279 Chr4 34119127 0 Translocation 0 FN3226-S Chr7 24585651 Chr4 34119114 0 Translocation 0 FN3226-S Chr7 25677377 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3226-S Chr7 5943521 Chr3 31605370 0 Translocation 0 LOC_Os03g55540 ZOS3-18 - C2H2 zinc finger protein, expressed FN3226-S Chr7 8030045 8030047 0 0 Deletion 2 INTERGENIC HET FN3226-S Chr7 9576891 9576892 0 0 Deletion 1 downstream_gene_variant HET FN3226-S Chr8 10547302 10547303 0 0 Deletion 1 upstream_gene_variant HET FN3226-S Chr8 13558381 G-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr8 17910649 17910649 0 0 Insertion 12 downstream_gene_variant HET FN3226-S Chr8 22852405 22852406 0 0 Deletion 1 upstream_gene_variant HET FN3226-S Chr8 23698274 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3226-S Chr8 25683860 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g40570 pyridoxamine 5'-phosphate oxidase family protein, putative, expressed FN3226-S Chr8 8133543 Chr1 1378687 0 Translocation 0 FN3226-S Chr9 12553619 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr9 16020130 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3226-S Chr9 6122245 6122248 0 0 Deletion 3 INTRON HET