FN3230-S Chr1 14383549 14798170 0 0 Inversion 414621 FN3230-S Chr1 15747699 15747701 0 0 Deletion 2 downstream_gene_variant HET FN3230-S Chr1 18759987 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3230-S Chr1 1940997 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3230-S Chr1 27491071 27491071 0 0 Insertion 5 upstream_gene_variant HET FN3230-S Chr1 35671123 35671125 0 0 Deletion 2 downstream_gene_variant HET FN3230-S Chr1 36712662 A-G 0 0 Single Base Substitution 0 INTRON HET FN3230-S Chr1 39518396 39518396 0 0 Insertion 54 upstream_gene_variant HET FN3230-S Chr1 839145 839146 0 0 Deletion 1 upstream_gene_variant HET FN3230-S Chr1 9483824 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3230-S Chr10 11224 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g01008 retrotransposon protein, putative, unclassified FN3230-S Chr10 11636716 Chr5 8932310 0 Translocation 0 FN3230-S Chr10 12723232 12723232 0 0 Insertion 1 downstream_gene_variant HET FN3230-S Chr10 15567015 15567015 0 0 Insertion 1 upstream_gene_variant HET FN3230-S Chr10 16007483 16007484 0 0 Deletion 1 downstream_gene_variant HET FN3230-S Chr10 5892407 5892407 0 0 Insertion 27 upstream_gene_variant HET FN3230-S Chr10 6987654 6987657 0 0 Deletion 3 upstream_gene_variant HET FN3230-S Chr10 8754303 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g17370 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3230-S Chr10 9292941 9292941 0 0 Insertion 1 downstream_gene_variant HET FN3230-S Chr10 9659330 Chr5 24904643 0 Translocation 0 FN3230-S Chr11 17054769 T-C 0 0 Single Base Substitution 0 INTRON HET FN3230-S Chr11 19318021 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3230-S Chr11 19870432 Chr8 5195559 0 Translocation 0 LOC_Os11g33970 plant protein of unknown function domain containing protein, expressed FN3230-S Chr11 26139359 Chr10 12950174 0 Translocation 0 FN3230-S Chr11 9689265 T-A 0 0 Single Base Substitution 0 INTRON HET FN3230-S Chr12 11160083 Chr6 22606150 0 Translocation 0 FN3230-S Chr12 12528794 Chr2 13956794 0 Translocation 0 LOC_Os02g24090 retrotransposon protein, putative, unclassified, expressed FN3230-S Chr12 19690940 19690943 0 0 Deletion 3 upstream_gene_variant HET FN3230-S Chr12 21842071 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3230-S Chr12 3886093 A-T 0 0 Single Base Substitution 0 INTRON HET FN3230-S Chr12 5158275 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3230-S Chr12 6869292 6869314 0 0 Deletion 22 upstream_gene_variant HET FN3230-S Chr2 20546189 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g34340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3230-S Chr2 29007674 29007674 0 0 Insertion 76 intron_variant HET FN3230-S Chr2 9206878 9206878 0 0 Insertion 1 upstream_gene_variant HET FN3230-S Chr3 14256170 14256171 0 0 Deletion 1 upstream_gene_variant HET FN3230-S Chr3 18861924 18861924 0 0 Insertion 1 upstream_gene_variant HET FN3230-S Chr3 5235788 5235788 0 0 Insertion 31 downstream_gene_variant HET FN3230-S Chr4 18085779 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3230-S Chr4 19764151 19764152 0 0 Deletion 1 upstream_gene_variant HET FN3230-S Chr4 21036117 21036118 0 0 Deletion 1 frameshift_variant HET LOC_Os04g34690 transposon protein, putative, unclassified, expressed FN3230-S Chr4 2223567 A-G 0 0 Single Base Substitution 0 INTRON HET FN3230-S Chr4 2461485 2461485 0 0 Insertion 34 intergenic_region HET FN3230-S Chr4 2621797 2621799 0 0 Deletion 2 upstream_gene_variant HET FN3230-S Chr4 28456674 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3230-S Chr4 33486124 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3230-S Chr4 565247 565248 0 0 Deletion 1 upstream_gene_variant HET FN3230-S Chr4 7859118 Chr2 21394561 0 Translocation 0 FN3230-S Chr4 7963105 7963106 0 0 Deletion 1 downstream_gene_variant HET FN3230-S Chr4 8179604 8179605 0 0 Deletion 1 intron_variant HET FN3230-S Chr4 8197053 8197054 0 0 Deletion 1 upstream_gene_variant HET FN3230-S Chr5 10294725 10294726 0 0 Deletion 1 downstream_gene_variant HET FN3230-S Chr5 25552582 25552582 0 0 Insertion 1 upstream_gene_variant HET FN3230-S Chr5 8258085 8258085 0 0 Insertion 22 intergenic_region HET FN3230-S Chr5 9323084 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN3230-S Chr6 15445719 15445720 0 0 Deletion 1 intergenic_region HET FN3230-S Chr6 16047173 16047173 0 0 Insertion 69 upstream_gene_variant HET FN3230-S Chr6 19928281 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os06g34220 retrotransposon protein, putative, unclassified, expressed FN3230-S Chr6 28484506 28484508 0 0 Deletion 2 UTR_3_PRIME HOMO FN3230-S Chr7 11436593 11554948 0 0 Inversion 118355 LOC_Os07g19530 peptidase, putative, expressed FN3230-S Chr7 11436613 11554949 0 0 Inversion 118336 LOC_Os07g19530 peptidase, putative, expressed FN3230-S Chr7 1224707 1224715 0 0 Deletion 8 INTERGENIC HOMO FN3230-S Chr7 16928664 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3230-S Chr8 14791165 14791166 0 0 Deletion 1 INTERGENIC HOMO FN3230-S Chr8 19170691 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3230-S Chr8 19298922 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3230-S Chr8 22117269 22117273 0 0 Deletion 4 INTERGENIC HOMO FN3230-S Chr8 23343209 23343211 0 0 Deletion 2 UTR_3_PRIME HET FN3230-S Chr8 26270875 26270875 0 0 Insertion 30 upstream_gene_variant HET FN3230-S Chr8 2899829 2899830 0 0 Deletion 1 downstream_gene_variant HET FN3230-S Chr8 5670420 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3230-S Chr8 5944135 5944136 0 0 Deletion 1 upstream_gene_variant HET FN3230-S Chr8 792192 792206 0 0 Deletion 14 upstream_gene_variant HET FN3230-S Chr9 126321 Chr7 14047221 0 Translocation 0 FN3230-S Chr9 15848817 15848858 0 0 Deletion 41 upstream_gene_variant HET FN3230-S Chr9 6530706 6530707 0 0 Deletion 1 upstream_gene_variant HET FN3230-S Chr9 6798386 C-G 0 0 Single Base Substitution 0 INTERGENIC HOMO