FN3232-S Chr1 11942313 11942317 0 0 Deletion 4 INTERGENIC HOMO FN3232-S Chr1 13034261 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g23200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3232-S Chr1 13706071 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g24330 retrotransposon protein, putative, unclassified, expressed FN3232-S Chr1 17268051 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN3232-S Chr1 19612836 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3232-S Chr1 25600582 25600586 0 0 Deletion 4 INTERGENIC HOMO FN3232-S Chr1 30599279 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3232-S Chr1 36466371 C-A 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN3232-S Chr1 36563008 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3232-S Chr10 15917270 15917270 0 0 Insertion 16 upstream_gene_variant HET FN3232-S Chr10 18338113 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os10g34390 expressed protein FN3232-S Chr10 18639159 18639168 0 0 Deletion 9 INTERGENIC HOMO FN3232-S Chr10 2018271 Chr5 17162018 0 Translocation 0 LOC_Os05g29690 retrotransposon protein, putative, unclassified, expressed FN3232-S Chr10 5894780 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3232-S Chr10 9872200 C-G 0 0 Single Base Substitution 0 INTRON HET FN3232-S Chr11 10240895 T-A 0 0 Single Base Substitution 0 INTRON HET FN3232-S Chr11 21878497 21878498 0 0 Deletion 1 INTERGENIC HOMO FN3232-S Chr12 1411351 1411554 0 0 Inversion 203 FN3232-S Chr12 20323249 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3232-S Chr2 11825424 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g20080 retrotransposon protein, putative, unclassified FN3232-S Chr2 13221841 13221842 0 0 Deletion 1 INTERGENIC HET FN3232-S Chr2 13244763 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3232-S Chr2 17666453 A-G 0 0 Single Base Substitution 0 INTRON HET FN3232-S Chr2 34703839 34703848 0 0 Deletion 9 INTERGENIC HET FN3232-S Chr2 8842878 8842885 0 0 Deletion 7 INTERGENIC HET FN3232-S Chr3 12177883 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3232-S Chr3 22207680 22207681 0 0 Deletion 1 INTERGENIC HET FN3232-S Chr3 23314704 G-C 0 0 Single Base Substitution 0 INTRON HET FN3232-S Chr3 23677307 23677311 0 0 Deletion 4 INTERGENIC HET FN3232-S Chr3 23723958 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3232-S Chr3 24914061 24914061 0 0 Insertion 10 upstream_gene_variant HET FN3232-S Chr3 36087711 C-T 0 0 Single Base Substitution 0 INTRON HOMO FN3232-S Chr4 15965521 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3232-S Chr4 2369265 G-C 0 0 Single Base Substitution 0 INTRON HET FN3232-S Chr4 28151652 28151652 0 0 Insertion 14 upstream_gene_variant HET FN3232-S Chr4 28852012 28852014 0 0 Deletion 2 INTERGENIC HOMO FN3232-S Chr5 14007127 14007127 0 0 Insertion 18 upstream_gene_variant HET FN3232-S Chr6 14356513 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3232-S Chr6 15194385 C-T 0 0 Single Base Substitution 0 INTRON HET FN3232-S Chr6 15988784 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3232-S Chr6 24674147 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3232-S Chr6 31128490 31128505 0 0 Deletion 15 UTR_5_PRIME HOMO FN3232-S Chr6 5354977 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3232-S Chr7 15051656 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3232-S Chr7 21461588 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3232-S Chr7 3200680 A-G 0 0 Single Base Substitution 0 INTRON HET FN3232-S Chr7 3961308 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3232-S Chr7 6683360 6683451 0 0 Deletion 91 intergenic_region HET FN3232-S Chr8 24061128 24061129 0 0 Deletion 1 INTERGENIC HET FN3232-S Chr8 3029605 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3232-S Chr8 6726846 7393579 0 0 Inversion 666733 FN3232-S Chr8 7284001 7309000 0 0 Deletion 24999 LOC_Os08g12380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3232-S Chr8 7284001 7309000 0 0 Deletion 24999 LOC_Os08g12390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3232-S Chr8 7284001 7309000 0 0 Deletion 24999 LOC_Os08g14840 expressed protein FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28400 alpha-amylase precursor, putative, expressed FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28410 expressed protein FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28420 alpha-amylase precursor, putative, expressed FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28440 AP2 domain containing protein, expressed FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28450 paramyosin, putative, expressed FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28460 xyloglucan fucosyltransferase, putative, expressed FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28470 leucine-rich repeat family protein, putative, expressed FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28480 expressed protein FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28489 expressed protein FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28500 EF hand family protein, putative, expressed FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28510 EF hand family protein, putative, expressed FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28520 expressed protein FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28530 expressed protein FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28540 expressed protein FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28550 expressed protein FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g28560 protein phosphotase protein, putative, expressed FN3232-S Chr9 17247001 17374000 0 0 Deletion 126999 LOC_Os09g29080 expressed protein FN3232-S Chr9 7767809 7767810 0 0 Deletion 1 INTERGENIC HET