FN3241-S Chr1 17201402 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os01g31460 retrotransposon protein, putative, unclassified, expressed FN3241-S Chr1 22484788 22484837 0 0 Deletion 49 upstream_gene_variant HET FN3241-S Chr1 26064774 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g45880 retrotransposon protein, putative, unclassified, expressed FN3241-S Chr1 28778462 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g50080 MDR-like ABC transporter, putative, expressed FN3241-S Chr1 28778463 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3241-S Chr1 4705720 4705722 0 0 Deletion 2 INTERGENIC HET FN3241-S Chr1 9984187 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3241-S Chr10 12868317 G-A 0 0 Single Base Substitution 0 INTRON HET FN3241-S Chr10 2101234 Chr4 18278759 0 Translocation 0 LOC_Os10g04460 expressed protein FN3241-S Chr11 17782600 Chr8 23501781 0 Translocation 0 FN3241-S Chr11 5845665 5845665 0 0 Insertion 40 upstream_gene_variant HET FN3241-S Chr11 7354108 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3241-S Chr11 7354109 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3241-S Chr11 738113 738122 0 0 Deletion 9 downstream_gene_variant HET FN3241-S Chr12 21054712 21054720 0 0 Deletion 8 INTERGENIC HOMO FN3241-S Chr12 23684711 23684722 0 0 Deletion 11 INTERGENIC HET FN3241-S Chr12 24553170 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3241-S Chr12 26022546 26022551 0 0 Deletion 5 UTR_5_PRIME HOMO FN3241-S Chr12 594357 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3241-S Chr2 12059063 12059096 0 0 Deletion 33 INTERGENIC HOMO FN3241-S Chr2 17825854 17825854 0 0 Insertion 1 upstream_gene_variant HET FN3241-S Chr2 18826500 18826503 0 0 Deletion 3 INTERGENIC HOMO FN3241-S Chr2 22258901 22258901 0 0 Insertion 2 INTRON HET FN3241-S Chr2 26004865 26845040 0 0 Inversion 840175 FN3241-S Chr2 26004870 26845058 0 0 Inversion 840188 FN3241-S Chr2 31914988 31914990 0 0 Deletion 2 INTERGENIC HET FN3241-S Chr3 1559831 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3241-S Chr3 16789087 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3241-S Chr3 31833892 31833899 0 0 Deletion 7 INTERGENIC HOMO FN3241-S Chr3 9382869 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3241-S Chr4 19164718 19164719 0 0 Deletion 1 INTERGENIC HOMO FN3241-S Chr4 31699452 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN3241-S Chr4 33670712 34052741 0 0 Inversion 382029 FN3241-S Chr4 34284558 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os04g57610 auxin response factor, putative, expressed FN3241-S Chr4 9730071 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g17760 retrotransposon protein, putative, unclassified, expressed FN3241-S Chr5 11717809 C-A 0 0 Single Base Substitution 0 INTRON HET FN3241-S Chr5 16598226 16598246 0 0 Deletion 20 INTERGENIC HET FN3241-S Chr5 17662395 Chr3 34809637 0 Translocation 0 FN3241-S Chr5 17669840 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3241-S Chr5 22350329 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3241-S Chr5 24347877 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN3241-S Chr5 24347878 G-A 0 0 Single Base Substitution 0 INTRON HOMO FN3241-S Chr5 9824576 9824579 0 0 Deletion 3 INTRON HET FN3241-S Chr6 13459246 13459485 0 0 Inversion 239 FN3241-S Chr6 14476682 14476686 0 0 Deletion 4 downstream_gene_variant HET FN3241-S Chr6 15399316 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g26310 retrotransposon protein, putative, unclassified, expressed FN3241-S Chr6 15871918 A-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3241-S Chr6 17033517 17033528 0 0 Deletion 11 INTERGENIC HET FN3241-S Chr6 8507675 8507675 0 0 Insertion 33 upstream_gene_variant HET FN3241-S Chr6 9662188 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3241-S Chr6 9662189 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3241-S Chr7 12229807 12229808 0 0 Deletion 1 intergenic_region HET FN3241-S Chr7 12474980 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3241-S Chr7 14759827 14759839 0 0 Deletion 12 INTERGENIC HET FN3241-S Chr8 3111662 Chr5 17722750 0 Translocation 0 LOC_Os05g30580 OsSub46 - Putative Subtilisin homologue, expressed FN3241-S Chr8 3287895 Chr3 34809641 0 Translocation 0 LOC_Os08g06020 MSP domain containing protein, expressed FN3241-S Chr8 6654032 6654040 0 0 Deletion 8 INTRON HOMO FN3241-S Chr8 6751269 Chr2 610967 0 Translocation 0 LOC_Os02g02080 expressed protein FN3241-S Chr8 6908121 6908151 0 0 Deletion 30 INTERGENIC HET FN3241-S Chr9 10574245 10574245 0 0 Insertion 1 upstream_gene_variant HET FN3241-S Chr9 16313243 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3241-S Chr9 21024566 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3241-S Chr9 4763164 T-C 0 0 Single Base Substitution 0 INTRON HOMO