FN3251-S Chr1 2207959 2207959 0 0 Insertion 39 downstream_gene_variant HET FN3251-S Chr1 25822942 25822990 0 0 Deletion 48 downstream_gene_variant HET FN3251-S Chr1 29216559 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr1 31154623 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr1 31155066 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr1 33863046 34070968 0 0 Inversion 207922 FN3251-S Chr1 33866149 34382579 0 0 Inversion 516430 FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g58960 cytochrome P450, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g58970 cytochrome P450, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g58980 hypothetical protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g58990 cytochrome P450, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59000 cytochrome P450, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59009 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59020 cytochrome P450, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59030 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59040 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59050 cytochrome P450, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59060 50S ribosomal protein, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59070 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59080 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59090 thylakoid lumenal 20 kDa protein, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59100 cytokinin-N-glucosyltransferase 1, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59110 indole-3-acetate beta-glucosyltransferase, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59120 cyclin, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59130 proline-rich family protein, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59140 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59150 tubulin/FtsZ domain containing protein, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59160 UBA/TS-N domain containing protein, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59170 hypothetical protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59180 OsFBX27 - F-box domain containing protein, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59190 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59200 DUF617 domain containing protein, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59210 retrotransposon protein, putative, unclassified FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59220 retrotransposon protein, putative, unclassified, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59230 retrotransposon protein, putative, unclassified, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59240 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59250 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59260 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59265 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59280 retrotransposon protein, putative, unclassified FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59290 hypothetical protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59300 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59310 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59320 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59340 dihydropyrimidinase, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59350 transcription factor, putative, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59360 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59370 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59390 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59400 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59410 VQ motif family protein, expressed FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g59420 expressed protein FN3251-S Chr1 34070001 34367000 0 0 Deletion 296999 LOC_Os01g71300 S-formylglutathione hydrolase, putative, expressed FN3251-S Chr1 37643000 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g64840 aspartic proteinase nepenthesin-1 precursor, putative, expressed FN3251-S Chr1 41615885 41615886 0 0 Deletion 1 intron_variant HET FN3251-S Chr1 761447 761512 0 0 Deletion 65 frameshift_variant HET LOC_Os01g02380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3251-S Chr10 17931685 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr10 18652737 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr10 19162984 19308722 0 0 Inversion 145738 FN3251-S Chr10 3278568 3278569 0 0 Deletion 1 upstream_gene_variant HET FN3251-S Chr10 5972745 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr11 11917205 C-T 0 0 Single Base Substitution 0 INTRON HET FN3251-S Chr11 11926971 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr11 14044299 G-A 0 0 Single Base Substitution 0 INTRON HET FN3251-S Chr11 21379748 21379748 0 0 Insertion 2 downstream_gene_variant HET FN3251-S Chr11 24413996 Chr5 5542130 0 Translocation 0 FN3251-S Chr11 27240768 27240771 0 0 Deletion 3 INTERGENIC HET FN3251-S Chr11 27384608 Chr3 33184708 0 Translocation 0 LOC_Os11g45250 ribonucleases P/MRP protein subunit POP1 containing protein, expressed FN3251-S Chr11 27384802 Chr3 33184707 0 Translocation 0 LOC_Os03g58240 GTP binding protein, putative, expressed FN3251-S Chr11 27384802 Chr3 33184707 0 Translocation 0 LOC_Os11g45250 ribonucleases P/MRP protein subunit POP1 containing protein, expressed FN3251-S Chr11 2914001 2924000 0 0 Deletion 9999 LOC_Os11g10820 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3251-S Chr11 8533037 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr12 13966747 Chr1 19217180 0 Translocation 0 FN3251-S Chr12 17891911 17891917 0 0 Deletion 6 upstream_gene_variant HET FN3251-S Chr12 18058519 18058520 0 0 Deletion 1 intergenic_region HET FN3251-S Chr12 18234099 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr12 21379901 21379902 0 0 Deletion 1 upstream_gene_variant HET FN3251-S Chr12 23132350 23132350 0 0 Insertion 10 downstream_gene_variant HET FN3251-S Chr12 26328755 26328756 0 0 Deletion 1 upstream_gene_variant HET FN3251-S Chr12 9721090 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr12 9721091 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr2 11449152 11449153 0 0 Deletion 1 upstream_gene_variant HET FN3251-S Chr2 1705357 1705368 0 0 Deletion 11 downstream_gene_variant HET FN3251-S Chr2 20504990 20504990 0 0 Insertion 1 upstream_gene_variant HET FN3251-S Chr2 28503957 28503957 0 0 Insertion 1 intergenic_region HET FN3251-S Chr2 32005877 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr2 4865403 5051634 0 0 Inversion 186231 LOC_Os02g09790 disease resistance protein RPM1, putative, expressed FN3251-S Chr2 7702621 8081622 0 0 Inversion 379001 FN3251-S Chr2 7702631 8081632 0 0 Inversion 379001 FN3251-S Chr3 16232252 16232316 0 0 Deletion 64 upstream_gene_variant HET FN3251-S Chr3 18789240 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr3 19427196 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g34090 retrotransposon protein, putative, unclassified, expressed FN3251-S Chr3 21020102 G-C 0 0 Single Base Substitution 0 UTR_3_PRIME HET FN3251-S Chr3 21032747 21032747 0 0 Insertion 47 downstream_gene_variant HET FN3251-S Chr3 27766264 G-A 0 0 Single Base Substitution 0 INTRON HET FN3251-S Chr3 31003895 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr3 34720459 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3251-S Chr3 6964037 6964037 0 0 Insertion 1 upstream_gene_variant HET FN3251-S Chr4 11625701 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3251-S Chr4 16920537 16920537 0 0 Insertion 1 downstream_gene_variant HET FN3251-S Chr4 19540367 T-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3251-S Chr4 23247001 23267000 0 0 Deletion 19999 LOC_Os01g01689 phosphatidylinositol 3- and 4-kinase family protein, expressed FN3251-S Chr4 306066 306067 0 0 Deletion 1 intron_variant HET FN3251-S Chr4 7295544 7295550 0 0 Deletion 6 upstream_gene_variant HET FN3251-S Chr4 8605174 8605218 0 0 Deletion 44 upstream_gene_variant HET FN3251-S Chr5 2662877 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr5 2662878 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr5 27381212 T-A 0 0 Single Base Substitution 0 INTRON HET FN3251-S Chr5 3210590 A-C 0 0 Single Base Substitution 0 INTRON HET FN3251-S Chr6 13577251 T-G 0 0 Single Base Substitution 0 INTRON HET FN3251-S Chr6 13982283 13982283 0 0 Insertion 1 upstream_gene_variant HET FN3251-S Chr6 17693030 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3251-S Chr6 20803549 T-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3251-S Chr6 9810369 9810376 0 0 Deletion 7 INTERGENIC HET FN3251-S Chr7 18889188 18889188 0 0 Insertion 1 upstream_gene_variant HET FN3251-S Chr7 19809059 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr7 20458006 20458006 0 0 Insertion 4 upstream_gene_variant HET FN3251-S Chr7 223685 223685 0 0 Insertion 1 upstream_gene_variant HET FN3251-S Chr7 25245647 25245995 0 0 Inversion 348 FN3251-S Chr7 8562236 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g14940 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3251-S Chr8 12737280 12737283 0 0 Deletion 3 upstream_gene_variant HET FN3251-S Chr8 14458464 14458464 0 0 Insertion 1 downstream_gene_variant HET FN3251-S Chr8 20307392 20307438 0 0 Deletion 46 intergenic_region HET FN3251-S Chr8 25303806 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr8 5912934 5912942 0 0 Deletion 8 upstream_gene_variant HET FN3251-S Chr8 7293363 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr8 872750 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr9 11086218 11086265 0 0 Deletion 47 upstream_gene_variant HET FN3251-S Chr9 1462236 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3251-S Chr9 15181692 15181720 0 0 Deletion 28 upstream_gene_variant HET FN3251-S Chr9 16188886 16188886 0 0 Insertion 1 intron_variant HET FN3251-S Chr9 16583962 16583971 0 0 Deletion 9 INTERGENIC HOMO FN3251-S Chr9 7057134 Chr1 31953047 0 Translocation 0 FN3251-S Chr9 7291693 7291790 0 0 Deletion 97 downstream_gene_variant HET FN3251-S Chr9 9684023 9684024 0 0 Deletion 1 INTRON HET