FN3262-S Chr1 16897668 16897835 0 0 Deletion 167 intergenic_region HET FN3262-S Chr1 16943415 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr1 18337542 18337548 0 0 Deletion 6 INTERGENIC HOMO FN3262-S Chr1 30043714 30043728 0 0 Deletion 14 UTR_3_PRIME HOMO FN3262-S Chr1 32239957 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr1 33608083 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr1 40999246 40999247 0 0 Deletion 1 INTERGENIC HOMO FN3262-S Chr1 5943189 5943189 0 0 Insertion 6 upstream_gene_variant HET FN3262-S Chr10 10599027 10599033 0 0 Deletion 6 CODON_DELETION HET LOC_Os10g20930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3262-S Chr10 17952818 17952819 0 0 Deletion 1 INTRON HOMO FN3262-S Chr10 20967020 20967022 0 0 Deletion 2 INTERGENIC HOMO FN3262-S Chr10 6039675 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr11 14100823 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr11 15036076 15036076 0 0 Insertion 1 upstream_gene_variant HET FN3262-S Chr11 20783228 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr11 21919988 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr11 26225483 26225483 0 0 Insertion 2 downstream_gene_variant HET FN3262-S Chr12 11399818 11399821 0 0 Deletion 3 INTERGENIC HOMO FN3262-S Chr12 14486112 14486112 0 0 Insertion 16 downstream_gene_variant HET FN3262-S Chr12 23066491 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g37570 protein kinase family protein, putative, expressed FN3262-S Chr2 13023737 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3262-S Chr2 23815936 23815942 0 0 Deletion 6 INTRON HET FN3262-S Chr2 24106540 24106541 0 0 Deletion 1 INTERGENIC HET FN3262-S Chr2 27226237 27226243 0 0 Deletion 6 INTRON HET FN3262-S Chr2 30718322 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr3 16784580 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3262-S Chr3 19500523 19500523 0 0 Insertion 1 INTRON HOMO FN3262-S Chr3 22523240 22523249 0 0 Deletion 9 INTERGENIC HOMO FN3262-S Chr3 34896823 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g61540 lipase class 3 family protein, putative, expressed FN3262-S Chr4 12081986 12081989 0 0 Deletion 3 INTERGENIC HOMO FN3262-S Chr4 12125001 12137000 0 0 Deletion 11999 LOC_Os04g23240 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3262-S Chr4 13291100 13322928 0 0 Inversion 31828 LOC_Os04g23280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3262-S Chr4 16846072 C-A 0 0 Single Base Substitution 0 INTRON HET FN3262-S Chr4 24002499 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3262-S Chr4 27441010 G-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3262-S Chr4 29466001 29485000 0 0 Deletion 18999 LOC_Os04g49380 transposon protein, putative, unclassified, expressed FN3262-S Chr4 29466001 29485000 0 0 Deletion 18999 LOC_Os04g49394 ulp1 protease family, C-terminal catalytic domain containing protein, expressed FN3262-S Chr4 29466001 29485000 0 0 Deletion 18999 LOC_Os04g54020 receptor-like kinase, putative, expressed FN3262-S Chr4 30116607 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3262-S Chr4 33072517 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN3262-S Chr4 388254 388254 0 0 Insertion 1 INTERGENIC HET FN3262-S Chr4 5019976 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr4 6391764 6391764 0 0 Insertion 8 upstream_gene_variant HET FN3262-S Chr5 10161596 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr5 11343535 Chr3 18507930 0 Translocation 0 FN3262-S Chr5 12166146 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr5 14408174 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os05g24880 dehydrogenase, putative, expressed FN3262-S Chr5 16457952 16457952 0 0 Insertion 2 INTERGENIC HET FN3262-S Chr5 18276973 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os05g31420 GRAS family transcription factor containing protein, expressed FN3262-S Chr5 1880393 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3262-S Chr5 7022384 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr5 9802523 C-G 0 0 Single Base Substitution 0 INTRON HET FN3262-S Chr6 15389247 C-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3262-S Chr6 17047953 17047955 0 0 Deletion 2 INTERGENIC HET FN3262-S Chr6 18377492 18377504 0 0 Deletion 12 upstream_gene_variant HET FN3262-S Chr6 21000304 21000305 0 0 Deletion 1 INTERGENIC HET FN3262-S Chr7 10903865 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr8 12656279 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr8 17261576 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr8 19009286 19009300 0 0 Deletion 14 upstream_gene_variant HET FN3262-S Chr8 24923957 24923962 0 0 Deletion 5 upstream_gene_variant HET FN3262-S Chr8 25048108 25048108 0 0 Insertion 8 upstream_gene_variant HET FN3262-S Chr8 8359394 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g13950 transposon protein, putative, CACTA, En/Spm sub-class FN3262-S Chr9 16121272 T-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr9 16800632 16800635 0 0 Deletion 3 INTRON HET FN3262-S Chr9 17595796 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr9 18362673 18653288 0 0 Inversion 290615 FN3262-S Chr9 18362676 18653321 0 0 Inversion 290645 FN3262-S Chr9 4255084 Chr4 3581408 0 Translocation 0 FN3262-S Chr9 8546494 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3262-S Chr9 8891699 A-G 0 0 Single Base Substitution 0 INTERGENIC HET