FN3270-S Chr1 14326248 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3270-S Chr1 23325070 23325071 0 0 Deletion 1 FRAME_SHIFT HOMO LOC_Os01g41200 heavy metal-associated domain containing protein, expressed FN3270-S Chr1 29600874 29600879 0 0 Deletion 5 INTRON HOMO FN3270-S Chr1 32138655 A-T 0 0 Single Base Substitution 0 UTR_5_PRIME HOMO FN3270-S Chr1 37563611 G-A 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3270-S Chr10 10559228 10559228 0 0 Insertion 76 upstream_gene_variant HET FN3270-S Chr10 12426723 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3270-S Chr10 15972716 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3270-S Chr10 2002231 2002232 0 0 Deletion 1 upstream_gene_variant HET FN3270-S Chr10 21326740 21326741 0 0 Deletion 1 SPLICE_SITE_REGION HOMO FN3270-S Chr10 8239411 8239413 0 0 Deletion 2 INTERGENIC HET FN3270-S Chr11 10478090 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3270-S Chr11 134588 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3270-S Chr11 15422684 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g26850 erythronate-4-phosphate dehydrogenase, putative, expressed FN3270-S Chr12 10629458 Chr9 16923103 0 Translocation 0 FN3270-S Chr12 20192011 20192015 0 0 Deletion 4 upstream_gene_variant HET FN3270-S Chr12 20221764 20221764 0 0 Insertion 22 upstream_gene_variant HET FN3270-S Chr12 25729736 A-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN3270-S Chr12 4278807 A-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3270-S Chr12 4543496 4543496 0 0 Insertion 2 INTERGENIC HET FN3270-S Chr2 1683631 A-G 0 0 Single Base Substitution 0 INTRON HET FN3270-S Chr2 17124345 17124354 0 0 Deletion 9 INTERGENIC HET FN3270-S Chr2 25835136 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3270-S Chr2 27018961 27734139 0 0 Inversion 715178 LOC_Os02g44590 OsSub20 - Putative Subtilisin homologue, expressed FN3270-S Chr2 27018980 27734144 0 0 Inversion 715164 LOC_Os02g44590 OsSub20 - Putative Subtilisin homologue, expressed FN3270-S Chr2 3079750 Chr1 23581007 0 Translocation 0 FN3270-S Chr2 4724405 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g09200 cytochrome P450 71D10, putative, expressed FN3270-S Chr2 9243408 9243411 0 0 Deletion 3 INTRON HET FN3270-S Chr3 14757940 14757972 0 0 Deletion 32 upstream_gene_variant HET FN3270-S Chr3 16987269 16987269 0 0 Insertion 2 intron_variant HET FN3270-S Chr3 20770885 T-G 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3270-S Chr3 32982321 33238273 0 0 Inversion 255952 LOC_Os03g57900 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed FN3270-S Chr4 10158058 10158064 0 0 Deletion 6 INTERGENIC HOMO FN3270-S Chr4 11585015 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3270-S Chr4 13680700 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3270-S Chr4 25230616 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3270-S Chr4 28133817 T-A 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HOMO FN3270-S Chr4 28948694 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3270-S Chr4 8368709 8368709 0 0 Insertion 1 downstream_gene_variant HET FN3270-S Chr5 10019113 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os05g17450 retrotransposon protein, putative, Ty3-gypsy subclass FN3270-S Chr5 12145728 T-G 0 0 Single Base Substitution 0 INTRON HOMO FN3270-S Chr5 13135595 13135608 0 0 Deletion 13 upstream_gene_variant HET FN3270-S Chr5 13312258 Chr3 33238268 0 Translocation 0 LOC_Os05g23320 expressed protein FN3270-S Chr5 13316308 Chr3 32982314 0 Translocation 0 LOC_Os03g57900 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed FN3270-S Chr5 15195140 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3270-S Chr5 1634633 1634633 0 0 Insertion 1 downstream_gene_variant HET FN3270-S Chr5 4528043 C-T 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN3270-S Chr5 6671922 C-G 0 0 Single Base Substitution 0 UTR_5_PRIME HOMO FN3270-S Chr5 9370687 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3270-S Chr6 12371507 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3270-S Chr6 15503080 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3270-S Chr6 1673586 1673591 0 0 Deletion 5 INTERGENIC HOMO FN3270-S Chr6 19998217 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3270-S Chr6 6769991 A-T 0 0 Single Base Substitution 0 INTRON HOMO FN3270-S Chr6 7413960 7413963 0 0 Deletion 3 INTERGENIC HET FN3270-S Chr6 9525479 9525480 0 0 Deletion 1 intron_variant HET FN3270-S Chr7 10252757 A-C 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3270-S Chr7 16246001 16274000 0 0 Deletion 27999 LOC_Os07g27850 GTPase activating protein, putative, expressed FN3270-S Chr7 16246001 16274000 0 0 Deletion 27999 LOC_Os07g27860 hypothetical protein FN3270-S Chr7 16246001 16274000 0 0 Deletion 27999 LOC_Os07g27870 thioesterase family protein, putative, expressed FN3270-S Chr7 16246001 16274000 0 0 Deletion 27999 LOC_Os07g27880 O-methyltransferase, putative, expressed FN3270-S Chr7 16246001 16274000 0 0 Deletion 27999 LOC_Os07g31870 expressed protein FN3270-S Chr7 1873535 1873535 0 0 Insertion 8 upstream_gene_variant HET FN3270-S Chr7 20204717 20204730 0 0 Deletion 13 INTERGENIC HOMO FN3270-S Chr7 8946729 8946732 0 0 Deletion 3 INTERGENIC HOMO FN3270-S Chr8 1002994 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g02480 retrotransposon protein, putative, unclassified, expressed FN3270-S Chr8 12702099 T-G 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HET FN3270-S Chr8 16273203 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g26760 retrotransposon protein, putative, unclassified, expressed FN3270-S Chr8 7270731 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HOMO LOC_Os08g12340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3270-S Chr9 13045786 13045804 0 0 Deletion 18 upstream_gene_variant HET FN3270-S Chr9 16102428 A-T 0 0 Single Base Substitution 0 UTR_3_PRIME HOMO FN3270-S Chr9 2373034 2373035 0 0 Deletion 1 downstream_gene_variant HET FN3270-S Chr9 8662882 8662886 0 0 Deletion 4 INTERGENIC HET