FN3273-S Chr1 11678971 11678979 0 0 Deletion 8 FRAME_SHIFT HET LOC_Os01g20900 OsWAK4 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed FN3273-S Chr1 15221268 G-A 0 0 Single Base Substitution 0 INTRON HET FN3273-S Chr1 2712418 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr1 28431838 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr1 41252001 41268000 0 0 Deletion 15999 LOC_Os02g03670 expressed protein FN3273-S Chr1 43019680 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr1 6339755 C-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr1 8184425 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr10 1603822 1603822 0 0 Insertion 22 intergenic_region HET FN3273-S Chr10 17145726 Chr1 2709755 0 Translocation 0 LOC_Os10g32740 zinc finger family protein, putative, expressed FN3273-S Chr10 17146920 Chr1 2709752 0 Translocation 0 FN3273-S Chr10 21419211 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g39980 expressed protein FN3273-S Chr10 22881670 22881671 0 0 Deletion 1 upstream_gene_variant HET FN3273-S Chr10 5037274 5037279 0 0 Deletion 5 INTERGENIC HET FN3273-S Chr11 10327422 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr11 10774364 10774366 0 0 Deletion 2 INTERGENIC HET FN3273-S Chr11 14258975 14258975 0 0 Insertion 8 intergenic_region HET FN3273-S Chr11 15127872 15127880 0 0 Deletion 8 INTERGENIC HET FN3273-S Chr11 23105304 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr11 25496717 26270317 0 0 Inversion 773600 LOC_Os11g42350 glutathione synthetase, chloroplast precursor, putative, expressed FN3273-S Chr11 25496717 26270317 0 0 Inversion 773600 LOC_Os11g43520 OsGrx_C17 - glutaredoxin subgroup III, expressed FN3273-S Chr11 26270324 Chr1 7608786 0 Translocation 0 LOC_Os11g43520 OsGrx_C17 - glutaredoxin subgroup III, expressed FN3273-S Chr11 3880774 3880774 0 0 Insertion 9 intergenic_region HET FN3273-S Chr12 26260372 T-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr12 570445 G-T 0 0 Single Base Substitution 0 INTRON HOMO FN3273-S Chr12 7306912 C-G 0 0 Single Base Substitution 0 INTRON HOMO FN3273-S Chr2 13034551 G-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr2 13822486 G-A 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr2 14551389 14551393 0 0 Deletion 4 upstream_gene_variant HET FN3273-S Chr2 6710927 6710927 0 0 Insertion 8 upstream_gene_variant HET FN3273-S Chr3 14053017 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr3 14072698 A-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr3 16313401 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr3 25969958 25969963 0 0 Deletion 5 INTERGENIC HET FN3273-S Chr3 28740507 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3273-S Chr3 3151182 3151186 0 0 Deletion 4 INTERGENIC HET FN3273-S Chr3 3720001 3748000 0 0 Deletion 27999 LOC_Os03g07320 transposon protein, putative, Pong sub-class, expressed FN3273-S Chr3 3720001 3748000 0 0 Deletion 27999 LOC_Os03g07330 pentatricopeptide, putative, expressed FN3273-S Chr3 3720001 3748000 0 0 Deletion 27999 LOC_Os03g07340 ribosomal L18p/L5e family protein, putative, expressed FN3273-S Chr3 3720001 3748000 0 0 Deletion 27999 LOC_Os03g07350 CSLA4 - cellulose synthase-like family A; mannan synthase, expressed FN3273-S Chr3 3720001 3748000 0 0 Deletion 27999 LOC_Os03g07360 expressed protein FN3273-S Chr3 3720001 3748000 0 0 Deletion 27999 LOC_Os03g07370 HNH endonuclease domain-containing protein, putative, expressed FN3273-S Chr3 3720001 3748000 0 0 Deletion 27999 LOC_Os03g07380 expressed protein FN3273-S Chr3 3720001 3748000 0 0 Deletion 27999 LOC_Os03g08400 retrotransposon protein, putative, unclassified, expressed FN3273-S Chr3 3781573 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr3 3781575 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr3 8836244 A-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3273-S Chr4 11435063 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr4 13055776 13055787 0 0 Deletion 11 INTRON HET FN3273-S Chr4 16627292 A-C 0 0 Single Base Substitution 0 SYNONYMOUS_CODING HOMO FN3273-S Chr4 20538288 20538310 0 0 Deletion 22 upstream_gene_variant HET FN3273-S Chr4 2102917 2102917 0 0 Insertion 2 upstream_gene_variant HET FN3273-S Chr4 2851389 T-A 0 0 Single Base Substitution 0 INTRON HOMO FN3273-S Chr4 28803416 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr4 29218264 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr4 3884189 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr4 3925586 A-G 0 0 Single Base Substitution 0 INTRON HOMO FN3273-S Chr4 6686351 6686351 0 0 Insertion 49 upstream_gene_variant HET FN3273-S Chr5 14519953 14519970 0 0 Deletion 17 UTR_5_PRIME HET FN3273-S Chr5 17097376 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g29110 retrotransposon protein, putative, unclassified, expressed FN3273-S Chr5 1991885 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr5 23297257 C-A 0 0 Single Base Substitution 0 INTRON HET FN3273-S Chr5 23297258 T-C 0 0 Single Base Substitution 0 INTRON HET FN3273-S Chr5 6115705 G-A 0 0 Single Base Substitution 0 START_LOST HET LOC_Os05g10960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3273-S Chr5 6561162 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr6 1168549 A-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr6 12648444 C-T 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3273-S Chr6 13477689 13477689 0 0 Insertion 2 INTRON HET FN3273-S Chr6 15196808 G-C 0 0 Single Base Substitution 0 INTRON HOMO FN3273-S Chr6 18292185 18292185 0 0 Insertion 1 downstream_gene_variant HET FN3273-S Chr6 25960939 T-C 0 0 Single Base Substitution 0 SPLICE_SITE_REGION HET FN3273-S Chr6 26147962 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g43490 cytochrome P450, putative, expressed FN3273-S Chr6 29438204 G-T 0 0 Single Base Substitution 0 INTRON HET FN3273-S Chr6 29438205 C-T 0 0 Single Base Substitution 0 INTRON HET FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g49980 expressed protein FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g49990 UPF0183 protein, putative, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50000 LYR motif containing protein, putative, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50020 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50030 CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50040 OsSAUR29 - Auxin-responsive SAUR gene family member, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50050 AAA-type ATPase family protein, putative, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50060 ras-related protein, putative, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50070 expressed protein FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50080 DUF581 domain containing protein, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50090 expressed protein FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50100 tyrosine protein kinase domain containing protein, putative, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50110 expressed protein FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50120 novel plant SNARE 11, putative, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50130 expressed protein FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50140 endoglucanase, putative, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50146 calcium-dependent protein kinase CPK1 adapter protein 2, putative, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50154 translocon-associated protein subunit alpha precursor, putative, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50170 BRE, putative, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os06g50180 DUF803 domain containing, putative, expressed FN3273-S Chr6 30264001 30384000 0 0 Deletion 119999 LOC_Os07g01420 peroxidase precursor, putative, expressed FN3273-S Chr6 30264351 G-T 0 0 Single Base Substitution 0 INTRON HET FN3273-S Chr6 30922146 A-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr6 3130568 A-G 0 0 Single Base Substitution 0 INTRON HET FN3273-S Chr6 4834062 T-G 0 0 Single Base Substitution 0 INTRON HET FN3273-S Chr6 7957776 T-C 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr7 12349220 12349220 0 0 Insertion 65 upstream_gene_variant HET FN3273-S Chr7 25273035 25304847 0 0 Inversion 31812 LOC_Os07g42280 von Willebrand factor type A domain containing protein, expressed FN3273-S Chr7 25273199 25304854 0 0 Inversion 31655 LOC_Os07g42280 von Willebrand factor type A domain containing protein, expressed FN3273-S Chr7 2769953 2769965 0 0 Deletion 12 UTR_3_PRIME HET FN3273-S Chr8 11657700 11657702 0 0 Deletion 2 downstream_gene_variant HET FN3273-S Chr8 19463134 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3273-S Chr8 23145748 C-G 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr8 24435934 24436274 0 0 Inversion 340 FN3273-S Chr8 4035245 G-A 0 0 Single Base Substitution 0 INTERGENIC HOMO FN3273-S Chr8 863538 863545 0 0 Deletion 7 INTERGENIC HOMO FN3273-S Chr9 11590952 11590966 0 0 Deletion 14 upstream_gene_variant HET FN3273-S Chr9 12407335 C-T 0 0 Single Base Substitution 0 INTERGENIC HET FN3273-S Chr9 18370340 18370340 0 0 Insertion 29 downstream_gene_variant HET FN3273-S Chr9 20939578 Chr2 10370631 0 Translocation 0 LOC_Os09g36280 glycosyl hydrolases family 17, putative, expressed FN3273-S Chr9 20939584 Chr2 10366212 0 Translocation 0 LOC_Os09g36280 glycosyl hydrolases family 17, putative, expressed FN3273-S Chr9 6748342 6748343 0 0 Deletion 1 INTERGENIC HET FN3273-S Chr9 9932392 9932393 0 0 Deletion 1 upstream_gene_variant HET