FN3287-S Chr1 10058378 T-A 0 0 Single Base Substitution 0 HET FN3287-S Chr1 11763896 C-T 0 0 Single Base Substitution 0 HET FN3287-S Chr1 13212912 G-A 0 0 Single Base Substitution 0 HET FN3287-S Chr1 22905292 22905530 0 0 Inversion 0 FN3287-S Chr1 24344877 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g42780 cysteine proteinase EP-B 2 precursor, putative, expressed FN3287-S Chr1 24583616 G-A 0 0 Single Base Substitution 0 Homo FN3287-S Chr10 11487628 11487629 0 0 Deletion 1 HET FN3287-S Chr10 15348936 15349389 0 0 Inversion 0 LOC_Os10g29540 protein kinase domain containing protein, expressed FN3287-S Chr10 20198640 A-T 0 0 Single Base Substitution 0 HET FN3287-S Chr10 20728018 20728019 0 0 Deletion 1 frameshift_variant HET LOC_Os10g38900 erythronate-4-phosphate dehydrogenase, putative, expressed FN3287-S Chr10 2147823 A-G 0 0 Single Base Substitution 0 Homo FN3287-S Chr10 22649903 22649905 0 0 Deletion 2 HET FN3287-S Chr10 5218310 T-A 0 0 Single Base Substitution 0 HET FN3287-S Chr10 9940966 A-T 0 0 Single Base Substitution 0 HET FN3287-S Chr11 10847456 10847457 0 0 Deletion 1 HET FN3287-S Chr11 11677785 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g20220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3287-S Chr11 18402057 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g31490 retrotransposon protein, putative, unclassified, expressed FN3287-S Chr11 20768048 C-T 0 0 Single Base Substitution 0 HET FN3287-S Chr11 8264015 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g14660 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3287-S Chr11 835721 A-G 0 0 Single Base Substitution 0 HET FN3287-S Chr12 10156938 Chr1 3091823 0 Translocation 0 FN3287-S Chr12 10156938 Chr1 3091823 0 Translocation 0 LOC_Os01g06560 transcription factor HBP-1b, putative, expressed FN3287-S Chr12 17972533 18616773 0 0 Inversion 0 FN3287-S Chr12 17972542 18616778 0 0 Inversion 0 FN3287-S Chr12 19116566 19116567 0 0 Deletion 1 HET FN3287-S Chr12 20343152 G-C 0 0 Single Base Substitution 0 HET FN3287-S Chr12 21057414 C-T 0 0 Single Base Substitution 0 HET FN3287-S Chr12 24236938 Chr9 19697761 0 Translocation 0 FN3287-S Chr12 24236938 Chr9 19697761 0 Translocation 0 LOC_Os09g32992 expressed protein FN3287-S Chr12 8797140 8797142 0 0 Deletion 2 HET FN3287-S Chr12 9113351 G-T 0 0 Single Base Substitution 0 HET FN3287-S Chr12 9113366 9113368 0 0 Deletion 2 HET FN3287-S Chr2 14386191 T-C 0 0 Single Base Substitution 0 HET FN3287-S Chr2 20098131 C-T 0 0 Single Base Substitution 0 HET FN3287-S Chr2 21978201 G-A 0 0 Single Base Substitution 0 Homo FN3287-S Chr2 22226097 C-T 0 0 Single Base Substitution 0 HET FN3287-S Chr2 2482288 T-C 0 0 Single Base Substitution 0 HET FN3287-S Chr2 26991356 G-T 0 0 Single Base Substitution 0 Homo FN3287-S Chr2 28103743 28104000 0 0 Inversion 0 FN3287-S Chr2 32661720 32661731 0 0 Deletion 11 HET FN3287-S Chr2 4821227 A-C 0 0 Single Base Substitution 0 Homo FN3287-S Chr3 10068151 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g18060 transposon protein, putative, unclassified, expressed FN3287-S Chr3 11018353 11018359 0 0 Deletion 6 HET FN3287-S Chr3 13360650 13360661 0 0 Deletion 11 Homo FN3287-S Chr3 18925828 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g33074 hypothetical protein FN3287-S Chr3 20672833 20672841 0 0 Deletion 8 Homo FN3287-S Chr3 26459391 G-A 0 0 Single Base Substitution 0 HET FN3287-S Chr3 28507842 28507843 0 0 Deletion 1 HET FN3287-S Chr3 28683435 28683438 0 0 Insertion 3 HET FN3287-S Chr3 31434908 31434911 0 0 Deletion 3 Homo FN3287-S Chr3 8449671 G-A 0 0 Single Base Substitution 0 Homo FN3287-S Chr4 10449644 10449646 0 0 Deletion 2 HET FN3287-S Chr4 10813104 G-C 0 0 Single Base Substitution 0 Homo FN3287-S Chr4 17662219 C-G 0 0 Single Base Substitution 0 HET FN3287-S Chr4 27444221 27444224 0 0 Insertion 3 HET FN3287-S Chr4 28456327 A-C 0 0 Single Base Substitution 0 HET FN3287-S Chr4 33169382 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g55720 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed FN3287-S Chr4 6825424 A-T 0 0 Single Base Substitution 0 HET FN3287-S Chr5 10835330 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR Homo LOC_Os05g18710 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3287-S Chr5 12140692 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g20710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3287-S Chr5 12196140 12196158 0 0 Deletion 18 HET FN3287-S Chr5 12577402 A-G 0 0 Single Base Substitution 0 HET FN3287-S Chr5 16895478 C-T 0 0 Single Base Substitution 0 HET FN3287-S Chr5 18945041 C-A 0 0 Single Base Substitution 0 HET FN3287-S Chr5 20220797 20220798 0 0 Insertion 1 HET FN3287-S Chr5 20323963 20323969 0 0 Insertion 6 HET FN3287-S Chr5 2049550 2049556 0 0 Deletion 6 Homo FN3287-S Chr5 26333603 T-C 0 0 Single Base Substitution 0 HET FN3287-S Chr5 2822351 2822352 0 0 Deletion 1 Homo FN3287-S Chr5 28398560 T-A 0 0 Single Base Substitution 0 HET FN3287-S Chr6 13261018 G-A 0 0 Single Base Substitution 0 HET FN3287-S Chr6 13287525 C-G 0 0 Single Base Substitution 0 HET FN3287-S Chr6 19660768 19660770 0 0 Deletion 2 HET FN3287-S Chr6 19750704 C-T 0 0 Single Base Substitution 0 HET FN3287-S Chr6 25586820 25586873 0 0 Deletion 53 HET FN3287-S Chr6 26213878 26213885 0 0 Deletion 7 Homo FN3287-S Chr6 3498811 G-T 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR HET LOC_Os06g07290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3287-S Chr6 4986931 A-C 0 0 Single Base Substitution 0 HET FN3287-S Chr6 5544759 A-T 0 0 Single Base Substitution 0 HET FN3287-S Chr6 8615563 T-G 0 0 Single Base Substitution 0 Homo FN3287-S Chr7 10708826 10708835 0 0 Deletion 9 Homo FN3287-S Chr7 26648928 G-A 0 0 Single Base Substitution 0 HET FN3287-S Chr7 27155914 G-C 0 0 Single Base Substitution 0 HET FN3287-S Chr7 29682658 G-T 0 0 Single Base Substitution 0 HET FN3287-S Chr8 11368886 G-A 0 0 Single Base Substitution 0 HET FN3287-S Chr8 16041212 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g26300 retrotransposon protein, putative, unclassified, expressed FN3287-S Chr8 16793210 G-A 0 0 Single Base Substitution 0 HET FN3287-S Chr8 17095192 G-A 0 0 Single Base Substitution 0 HET FN3287-S Chr8 17155496 17155497 0 0 Deletion 1 HET FN3287-S Chr8 19946813 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g32150 retrotransposon, putative, centromere-specific, expressed FN3287-S Chr8 25735484 25735485 0 0 Deletion 1 Homo FN3287-S Chr9 12766382 C-T 0 0 Single Base Substitution 0 HET FN3287-S Chr9 16361710 C-A 0 0 Single Base Substitution 0 HET FN3287-S Chr9 17271819 Chr4 4107386 0 Translocation 0 FN3287-S Chr9 17271819 Chr4 4107386 0 Translocation 0 LOC_Os04g07720 retrotransposon protein, putative, unclassified, expressed FN3287-S Chr9 17975203 C-T 0 0 Single Base Substitution 0 HET FN3287-S Chr9 18246920 Chr3 31502590 0 Translocation 0 FN3287-S Chr9 18246928 Chr3 31502032 0 Translocation 0 FN3287-S Chr9 18246928 Chr3 31502032 0 Translocation 0 LOC_Os03g55370 expressed protein FN3287-S Chr9 1943295 1943296 0 0 Deletion 1 frameshift_variant HET LOC_Os09g03830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3287-S Chr9 2178080 T-G 0 0 Single Base Substitution 0 HET FN3287-S Chr9 2521941 C-T 0 0 Single Base Substitution 0 HET FN3287-S Chr9 8634933 T-C 0 0 Single Base Substitution 0 HET FN3287-S Chr9 8966855 9086946 0 0 Inversion 0 FN3287-S Chr9 8966866 9086954 0 0 Inversion 0