FN3322-S Chr1 15055001 15087000 0 0 Deletion 31999 LOC_Os01g27010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3322-S Chr1 15055001 15087000 0 0 Deletion 31999 LOC_Os01g27020 transposon protein, putative, unclassified, expressed FN3322-S Chr1 15055001 15087000 0 0 Deletion 31999 LOC_Os01g27030 hypothetical protein FN3322-S Chr1 15055001 15087000 0 0 Deletion 31999 LOC_Os01g27040 chromatin-remodeling complex ATPase chain, putative, expressed FN3322-S Chr1 15055001 15087000 0 0 Deletion 31999 LOC_Os01g27050 flavin-containing monooxygenase family protein, putative, expressed FN3322-S Chr1 1753999 C-T 0 0 Single Base Substitution 0 HET FN3322-S Chr1 20635535 G-T 0 0 Single Base Substitution 0 HET FN3322-S Chr1 33577823 33577825 0 0 Insertion 2 HET FN3322-S Chr1 35991791 G-A 0 0 Single Base Substitution 0 HET FN3322-S Chr1 40308970 40308971 0 0 Insertion 1 frameshift_variant HET LOC_Os01g69810 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3322-S Chr10 18006607 A-T 0 0 Single Base Substitution 0 HET FN3322-S Chr10 5265863 Chr7 9798557 0 Translocation 0 FN3322-S Chr11 13410031 13614989 0 0 Inversion 0 FN3322-S Chr11 14327242 T-A 0 0 Single Base Substitution 0 HET FN3322-S Chr11 15952959 Chr7 11854568 0 Translocation 0 FN3322-S Chr11 16714835 16714837 0 0 Insertion 2 HET FN3322-S Chr11 17890250 Chr9 4630672 0 Translocation 0 FN3322-S Chr11 18442319 C-T 0 0 Single Base Substitution 0 HET FN3322-S Chr11 19442766 G-A 0 0 Single Base Substitution 0 HET FN3322-S Chr11 22549420 Chr9 22451072 0 Translocation 0 FN3322-S Chr11 22549420 Chr9 22451072 0 Translocation 0 LOC_Os09g39110 vignain precursor, putative, expressed FN3322-S Chr11 26633001 26660000 0 0 Deletion 26999 LOC_Os11g44084 transposon protein, putative, CACTA, En/Spm sub-class FN3322-S Chr11 26633001 26660000 0 0 Deletion 26999 LOC_Os11g44100 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3322-S Chr11 26633001 26660000 0 0 Deletion 26999 LOC_Os11g44110 expressed protein FN3322-S Chr11 26633001 26660000 0 0 Deletion 26999 LOC_Os11g44120 hypothetical protein FN3322-S Chr11 26633001 26660000 0 0 Deletion 26999 LOC_Os11g44130 retrotransposon protein, putative, unclassified FN3322-S Chr11 26633001 26660000 0 0 Deletion 26999 LOC_Os11g44140 retrotransposon protein, putative, Ty3-gypsy subclass FN3322-S Chr11 26633001 26660000 0 0 Deletion 26999 LOC_Os11g44150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3322-S Chr11 27072001 27101000 0 0 Deletion 28999 LOC_Os11g44740 retrotransposon protein, putative, Ty3-gypsy subclass FN3322-S Chr11 27072001 27101000 0 0 Deletion 28999 LOC_Os11g44750 retrotransposon protein, putative, unclassified, expressed FN3322-S Chr11 27072001 27101000 0 0 Deletion 28999 LOC_Os11g44760 retrotransposon protein, putative, Ty3-gypsy subclass FN3322-S Chr11 27072001 27101000 0 0 Deletion 28999 LOC_Os11g44770 retrotransposon protein, putative, unclassified, expressed FN3322-S Chr11 27106001 27121000 0 0 Deletion 14999 LOC_Os11g44790 EAP30/Vps36 family domain containing protein, expressed FN3322-S Chr11 27106001 27121000 0 0 Deletion 14999 LOC_Os11g44800 expressed protein FN3322-S Chr11 27106001 27121000 0 0 Deletion 14999 LOC_Os11g44810 auxin-repressed protein, putative, expressed FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44830 retrotransposon protein, putative, unclassified, expressed FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44840 expressed protein FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44850 expressed protein FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44860 cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44870 expressed protein FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44880 kinesin-4, putative, expressed FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44890 expressed protein FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44900 retrotransposon protein, putative, unclassified, expressed FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44910 DEAD-box ATP-dependent RNA helicase, putative, expressed FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44920 expressed protein FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44930 pentatricopeptide repeat domain containing protein, putative, expressed FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44940 seed maturation protein PM27, putative, expressed FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44950 glycosyl hydrolase family 3 protein, putative, expressed FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44960 NBS-LRR disease resistance protein, putative, expressed FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44970 NBS-LRR disease resistance protein, putative, expressed FN3322-S Chr11 27126001 27239000 0 0 Deletion 112999 LOC_Os11g44980 expressed protein FN3322-S Chr11 27246001 27263000 0 0 Deletion 16999 LOC_Os11g45000 retrotransposon protein, putative, unclassified, expressed FN3322-S Chr11 27246001 27263000 0 0 Deletion 16999 LOC_Os11g45010 retrotransposon protein, putative, unclassified, expressed FN3322-S Chr11 27246001 27263000 0 0 Deletion 16999 LOC_Os11g45030 expressed protein FN3322-S Chr11 27246001 27263000 0 0 Deletion 16999 LOC_Os11g45040 expressed protein FN3322-S Chr11 27246001 27263000 0 0 Deletion 16999 LOC_Os11g45050 NBS-LRR disease resistance protein, putative, expressed FN3322-S Chr11 27272001 27281000 0 0 Deletion 8999 LOC_Os11g45060 NB-ARC domain containing protein, expressed FN3322-S Chr11 27272001 27281000 0 0 Deletion 8999 LOC_Os11g45070 hypothetical protein FN3322-S Chr11 27272001 27281000 0 0 Deletion 8999 LOC_Os11g45080 expressed protein FN3322-S Chr11 27290001 27299000 0 0 Deletion 8999 LOC_Os11g45100 expressed protein FN3322-S Chr11 27290001 27299000 0 0 Deletion 8999 LOC_Os11g45110 hypothetical protein FN3322-S Chr11 27417964 Chr9 2724446 0 Translocation 0 LOC_Os11g45320 expressed protein FN3322-S Chr11 27843618 Chr6 22525981 0 Translocation 0 LOC_Os06g38080 von Willebrand factor type A domain containing protein, putative, expressed FN3322-S Chr11 27843618 Chr6 22525981 0 Translocation 0 LOC_Os11g46000 von Willebrand factor type A domain containing protein, putative, expressed FN3322-S Chr11 28168665 Chr5 29598156 0 Translocation 0 FN3322-S Chr11 28168665 Chr5 29598156 0 Translocation 0 LOC_Os05g51620 expressed protein FN3322-S Chr11 28626994 Chr10 752812 0 Translocation 0 FN3322-S Chr11 28683193 Chr7 1481182 0 Translocation 0 FN3322-S Chr11 3880096 3880097 0 0 Deletion 1 HET FN3322-S Chr11 5743804 Chr10 12207985 0 Translocation 0 FN3322-S Chr11 8062122 Chr5 5528680 0 Translocation 0 FN3322-S Chr12 10847965 Chr8 3231393 0 Translocation 0 FN3322-S Chr12 13251280 A-G 0 0 Single Base Substitution 0 Homo FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23440 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23450 expressed protein FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23460 expressed protein FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23470 retrotransposon protein, putative, unclassified FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23480 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23490 retrotransposon protein, putative, unclassified, expressed FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23500 retrotransposon protein, putative, unclassified FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23510 expressed protein FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23514 expressed protein FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23520 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23540 retrotransposon protein, putative, unclassified, expressed FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23550 expressed protein FN3322-S Chr12 13256001 13342000 0 0 Deletion 85999 LOC_Os12g23560 retrotransposon protein, putative, unclassified, expressed FN3322-S Chr12 13357001 13372000 0 0 Deletion 14999 LOC_Os12g23580 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3322-S Chr12 13357001 13372000 0 0 Deletion 14999 LOC_Os12g23590 retrotransposon protein, putative, unclassified FN3322-S Chr12 13547459 Chr11 22973797 0 Translocation 0 FN3322-S Chr12 13547459 Chr11 22973797 0 Translocation 0 LOC_Os11g38710 expressed protein FN3322-S Chr12 17839980 G-T 0 0 Single Base Substitution 0 HET FN3322-S Chr12 17881341 Chr2 13548441 0 Translocation 0 FN3322-S Chr12 17881341 Chr2 13548441 0 Translocation 0 LOC_Os02g22760 retrotransposon protein, putative, LINE subclass, expressed FN3322-S Chr12 18251802 C-T 0 0 Single Base Substitution 0 HET FN3322-S Chr12 19840888 Chr11 7073112 0 Translocation 0 FN3322-S Chr12 19840888 Chr11 7073112 0 Translocation 0 LOC_Os11g12590 expressed protein FN3322-S Chr12 20285021 Chr1 23525082 0 Translocation 0 FN3322-S Chr12 21538526 Chr2 5909922 0 Translocation 0 LOC_Os12g35410 retrotransposon protein, putative, unclassified, expressed FN3322-S Chr12 22242044 Chr8 14705929 0 Translocation 0 FN3322-S Chr12 26751575 G-A 0 0 Single Base Substitution 0 HET FN3322-S Chr12 4883679 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g09300 amino acid transporter, putative, expressed FN3322-S Chr12 5384427 Chr2 16818173 0 Translocation 0 FN3322-S Chr12 8566889 Chr10 2106336 0 Translocation 0 FN3322-S Chr2 11668027 11668031 0 0 Deletion 4 HET FN3322-S Chr2 31287388 31287389 0 0 Deletion 1 Homo FN3322-S Chr2 6461734 C-T 0 0 Single Base Substitution 0 HET FN3322-S Chr2 691779 C-T 0 0 Single Base Substitution 0 HET FN3322-S Chr3 13817096 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g24270 transposon protein, putative, unclassified, expressed FN3322-S Chr3 15920589 15920600 0 0 Deletion 11 Homo FN3322-S Chr3 19814578 G-C 0 0 Single Base Substitution 0 Homo FN3322-S Chr3 30923708 Chr1 22550939 0 Translocation 0 FN3322-S Chr3 30968986 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g54020 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3322-S Chr4 16584622 Chr2 20382715 0 Translocation 0 LOC_Os04g28090 MYB family transcription factor, putative, expressed FN3322-S Chr4 20186487 20186489 0 0 Insertion 2 HET FN3322-S Chr4 25877439 C-T 0 0 Single Base Substitution 0 Homo FN3322-S Chr5 12284701 Chr4 8543085 0 Translocation 0 FN3322-S Chr6 14879720 Chr1 8713315 0 Translocation 0 LOC_Os06g25420 expressed protein FN3322-S Chr6 21200642 Chr5 12284701 0 Translocation 0 FN3322-S Chr6 21857133 21857134 0 0 Insertion 1 HET FN3322-S Chr6 26367639 A-G 0 0 Single Base Substitution 0 HET FN3322-S Chr6 9190558 Chr3 2887281 0 Translocation 0 FN3322-S Chr6 9190558 Chr3 2887281 0 Translocation 0 LOC_Os03g05780 4-coumarate--CoA ligase-like 7, putative, expressed FN3322-S Chr6 9979238 Chr4 1179008 0 Translocation 0 LOC_Os06g17230 transposon protein, putative, CACTA, En/Spm sub-class FN3322-S Chr7 14222634 C-A 0 0 Single Base Substitution 0 Homo FN3322-S Chr7 14746208 G-A 0 0 Single Base Substitution 0 HET FN3322-S Chr7 16709404 16709409 0 0 Deletion 5 HET FN3322-S Chr7 16990876 16990891 0 0 Insertion 15 HET FN3322-S Chr7 22917860 Chr3 17572593 0 Translocation 0 LOC_Os07g38210 expressed protein FN3322-S Chr7 3115589 Chr5 24535046 0 Translocation 0 LOC_Os05g41890 expressed protein FN3322-S Chr7 3115589 Chr5 24535046 0 Translocation 0 LOC_Os07g06420 expressed protein FN3322-S Chr8 21417445 21417449 0 0 Deletion 4 Homo FN3322-S Chr8 22811119 C-T 0 0 Single Base Substitution 0 Homo FN3322-S Chr8 22955718 Chr5 23558302 0 Translocation 0 FN3322-S Chr8 22955718 Chr5 23558302 0 Translocation 0 LOC_Os05g40100 retrotransposon protein, putative, unclassified FN3322-S Chr8 22955731 Chr5 23557782 0 Translocation 0 FN3322-S Chr8 22955731 Chr5 23557782 0 Translocation 0 LOC_Os05g40100 retrotransposon protein, putative, unclassified FN3322-S Chr8 23737584 Chr7 23854829 0 Translocation 0 FN3322-S Chr8 25038289 Chr1 2752921 0 Translocation 0 LOC_Os01g05760 PAS2, putative, expressed FN3322-S Chr8 25038289 Chr1 2752921 0 Translocation 0 LOC_Os08g39570 Leucine Rich Repeat family protein, expressed FN3322-S Chr8 26672356 26672357 0 0 Deletion 1 HET FN3322-S Chr9 11504891 G-A 0 0 Single Base Substitution 0 Homo FN3322-S Chr9 16156899 G-A 0 0 Single Base Substitution 0 HET FN3322-S Chr9 18370188 Chr8 2960408 0 Translocation 0 FN3322-S Chr9 22454081 T-C 0 0 Single Base Substitution 0 HET FN3322-S Chr9 4154764 G-A 0 0 Single Base Substitution 0 Homo FN3322-S Chr9 8146703 Chr8 19798043 0 Translocation 0 FN3322-S Chr9 8146703 Chr8 19798043 0 Translocation 0 LOC_Os08g31930 BRCA1 C Terminus domain containing protein, expressed