FN3343-S Chr1 10208562 C-A 0 0 Single Base Substitution 0 HET FN3343-S Chr1 10635430 T-C 0 0 Single Base Substitution 0 HET FN3343-S Chr1 13569818 G-A 0 0 Single Base Substitution 0 HET FN3343-S Chr1 17794068 G-A 0 0 Single Base Substitution 0 HET FN3343-S Chr1 17794069 G-A 0 0 Single Base Substitution 0 HET FN3343-S Chr1 18683983 G-A 0 0 Single Base Substitution 0 HET FN3343-S Chr1 21688157 21688158 0 0 Insertion 1 frameshift_variant HET LOC_Os01g38610 helix-loop-helix DNA-binding domain containing protein, expressed FN3343-S Chr1 27961395 A-G 0 0 Single Base Substitution 0 HET FN3343-S Chr1 29957448 G-T 0 0 Single Base Substitution 0 HET FN3343-S Chr1 36804635 G-A 0 0 Single Base Substitution 0 Homo FN3343-S Chr10 12036046 Chr9 20924571 0 Translocation 0 FN3343-S Chr10 13662824 Chr6 28600249 0 Translocation 0 FN3343-S Chr10 13815555 13815558 0 0 Deletion 3 HET FN3343-S Chr10 16766040 T-A 0 0 Single Base Substitution 0 Homo FN3343-S Chr10 1747233 G-A 0 0 Single Base Substitution 0 HET FN3343-S Chr10 21241176 Chr9 3932578 0 Translocation 0 FN3343-S Chr10 9483167 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g18670 retrotransposon protein, putative, unclassified, expressed FN3343-S Chr10 9875606 T-A 0 0 Single Base Substitution 0 HET FN3343-S Chr11 11973858 11973869 0 0 Deletion 11 HET FN3343-S Chr11 16196624 T-A 0 0 Single Base Substitution 0 HET FN3343-S Chr11 20402151 C-T 0 0 Single Base Substitution 0 HET FN3343-S Chr11 20951059 20951069 0 0 Deletion 10 Homo FN3343-S Chr11 21046141 A-G 0 0 Single Base Substitution 0 Homo FN3343-S Chr11 25768101 G-A 0 0 Single Base Substitution 0 HET FN3343-S Chr11 25885237 G-A 0 0 Single Base Substitution 0 HET FN3343-S Chr11 26983298 G-A 0 0 Single Base Substitution 0 HET FN3343-S Chr11 28492035 T-A 0 0 Single Base Substitution 0 HET FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07870 DEAD/DEAH box helicase domain containing protein, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07880 expressed protein FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07890 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07900 hypothetical protein FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07910 transmembrane 9 superfamily member, putative, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07911 expressed protein FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07912 MLO domain containing protein, putative, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07916 nifU, putative, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07922 short chain dehydrogenase/reductase protein, putative, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07930 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07940 expressed protein FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07950 expressed protein FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07960 transferase family protein, putative, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07970 OsFBW2 - F-box domain and WD40 repeat containing protein, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g07980 ion channel nompc, putative, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g08000 hypothetical protein FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g08020 ankyrin repeat family protein, putative, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g08040 retrotransposon protein, putative, unclassified, expressed FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g08050 expressed protein FN3343-S Chr11 4032001 4193000 0 0 Deletion 160999 LOC_Os11g46160 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3343-S Chr11 4202001 4245000 0 0 Deletion 42999 LOC_Os11g08060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3343-S Chr11 4202001 4245000 0 0 Deletion 42999 LOC_Os11g08070 ankyrin repeat family protein, putative, expressed FN3343-S Chr11 4202001 4245000 0 0 Deletion 42999 LOC_Os11g08080 SWIRM domain containing protein, expressed FN3343-S Chr11 4202001 4245000 0 0 Deletion 42999 LOC_Os11g08090 expressed protein FN3343-S Chr11 7227464 7506529 0 0 Inversion 0 FN3343-S Chr11 785161 G-T 0 0 Single Base Substitution 0 HET FN3343-S Chr12 15701653 C-T 0 0 Single Base Substitution 0 HET FN3343-S Chr12 23004471 T-C 0 0 Single Base Substitution 0 Homo FN3343-S Chr12 576400 1039338 0 0 Inversion 0 FN3343-S Chr12 576418 1039355 0 0 Inversion 0 FN3343-S Chr12 8492880 T-C 0 0 Single Base Substitution 0 HET FN3343-S Chr12 9005678 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g15780 retrotransposon protein, putative, unclassified, expressed FN3343-S Chr12 908036 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g02620 zinc finger, C3HC4 type domain containing protein, expressed FN3343-S Chr12 9957165 G-A 0 0 Single Base Substitution 0 HET FN3343-S Chr2 13322237 T-A 0 0 Single Base Substitution 0 HET FN3343-S Chr2 13905145 G-C 0 0 Single Base Substitution 0 Homo FN3343-S Chr2 17597828 A-G 0 0 Single Base Substitution 0 Homo FN3343-S Chr2 22712967 T-C 0 0 Single Base Substitution 0 HET FN3343-S Chr2 33351317 T-C 0 0 Single Base Substitution 0 Homo FN3343-S Chr2 34566539 A-T 0 0 Single Base Substitution 0 Homo FN3343-S Chr2 9257329 9257334 0 0 Deletion 5 HET FN3343-S Chr3 13616678 C-T 0 0 Single Base Substitution 0 Homo FN3343-S Chr3 24601704 G-T 0 0 Single Base Substitution 0 HET FN3343-S Chr3 31576968 T-A 0 0 Single Base Substitution 0 HET FN3343-S Chr3 35763256 A-G 0 0 Single Base Substitution 0 HET FN3343-S Chr3 7297933 C-T 0 0 Single Base Substitution 0 HET FN3343-S Chr3 9187117 9187129 0 0 Deletion 12 HET FN3343-S Chr3 9905507 9905508 0 0 Deletion 1 frameshift_variant HET LOC_Os03g17800 phosphatidylinositol transfer protein alpha isoform, putative, expressed FN3343-S Chr4 13371938 C-A 0 0 Single Base Substitution 0 HET FN3343-S Chr4 24222353 T-C 0 0 Single Base Substitution 0 HET FN3343-S Chr4 2856864 A-G 0 0 Single Base Substitution 0 HET FN3343-S Chr4 29775409 C-T 0 0 Single Base Substitution 0 HET FN3343-S Chr4 35020427 35020432 0 0 Deletion 5 HET FN3343-S Chr5 12387018 T-A 0 0 Single Base Substitution 0 Homo FN3343-S Chr5 1936665 1936673 0 0 Insertion 8 frameshift_variant&stop_gained&splice_region_variant Homo LOC_Os05g04250 expressed protein FN3343-S Chr5 27492644 27492646 0 0 Deletion 2 HET FN3343-S Chr5 28355080 C-T 0 0 Single Base Substitution 0 Homo FN3343-S Chr6 10990860 A-G 0 0 Single Base Substitution 0 HET FN3343-S Chr6 11553591 C-T 0 0 Single Base Substitution 0 HET FN3343-S Chr6 13885049 13885057 0 0 Insertion 8 HET FN3343-S Chr6 14264389 G-T 0 0 Single Base Substitution 0 HET FN3343-S Chr6 18097227 G-A 0 0 Single Base Substitution 0 HET FN3343-S Chr6 24963528 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g41680 expressed protein FN3343-S Chr7 16262504 T-C 0 0 Single Base Substitution 0 HET FN3343-S Chr7 16764904 16765276 0 0 Deletion 372 exon_loss_variant&splice_acceptor_variant&splice_region_variant&intron_variant HET LOC_Os07g28640 expressed protein FN3343-S Chr7 17254094 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g29380 expressed protein FN3343-S Chr7 18154375 C-T 0 0 Single Base Substitution 0 HET FN3343-S Chr7 22855142 22855145 0 0 Deletion 3 Homo FN3343-S Chr7 2697399 C-T 0 0 Single Base Substitution 0 HET FN3343-S Chr7 28662851 C-T 0 0 Single Base Substitution 0 HET FN3343-S Chr8 10775171 C-T 0 0 Single Base Substitution 0 HET FN3343-S Chr8 1535763 C-G 0 0 Single Base Substitution 0 HET FN3343-S Chr8 15743401 15743402 0 0 Deletion 1 HET FN3343-S Chr8 1816990 G-A 0 0 Single Base Substitution 0 Homo FN3343-S Chr8 19774183 Chr5 12662343 0 Translocation 0 FN3343-S Chr8 21254756 21254788 0 0 Insertion 32 HET FN3343-S Chr8 2691239 A-G 0 0 Single Base Substitution 0 HET FN3343-S Chr8 28357519 C-T 0 0 Single Base Substitution 0 HET FN3343-S Chr8 3900493 C-T 0 0 Single Base Substitution 0 Homo FN3343-S Chr9 1678163 C-T 0 0 Single Base Substitution 0 Homo FN3343-S Chr9 17231608 17231609 0 0 Insertion 1 frameshift_variant HET LOC_Os09g28370 retrotransposon protein, putative, unclassified, expressed FN3343-S Chr9 20925613 Chr6 28600247 0 Translocation 0 FN3343-S Chr9 21345001 21390000 0 0 Deletion 44999 LOC_Os09g37006 protein of unknown function domain containing protein, expressed FN3343-S Chr9 21345001 21390000 0 0 Deletion 44999 LOC_Os09g37012 eukaryotic aspartyl protease domain containing protein, expressed FN3343-S Chr9 21345001 21390000 0 0 Deletion 44999 LOC_Os09g37020 expressed protein FN3343-S Chr9 21345001 21390000 0 0 Deletion 44999 LOC_Os09g37040 DUF630/DUF632 domains containing protein, putative, expressed FN3343-S Chr9 21345001 21390000 0 0 Deletion 44999 LOC_Os09g37050 RING-H2 finger protein ATL2B, putative, expressed FN3343-S Chr9 21345001 21390000 0 0 Deletion 44999 LOC_Os09g37060 transposon protein, putative, unclassified, expressed FN3343-S Chr9 21345001 21390000 0 0 Deletion 44999 LOC_Os09g37070 pentatricopeptide, putative, expressed FN3343-S Chr9 21345001 21390000 0 0 Deletion 44999 LOC_Os09g37080 expressed protein FN3343-S Chr9 3432915 C-T 0 0 Single Base Substitution 0 HET FN3343-S Chr9 4349260 T-A 0 0 Single Base Substitution 0 HET FN3343-S Chr9 5728720 C-G 0 0 Single Base Substitution 0 HET FN3343-S Chr9 6892925 A-G 0 0 Single Base Substitution 0 Homo FN3343-S Chr9 7854513 T-A 0 0 Single Base Substitution 0 Homo FN3343-S Chr9 8460115 A-G 0 0 Single Base Substitution 0 HET