FN3345-S Chr1 1188647 1188648 0 0 Deletion 1 HET FN3345-S Chr1 27008206 C-T 0 0 Single Base Substitution 0 HET FN3345-S Chr1 6258466 6258474 0 0 Deletion 8 Homo FN3345-S Chr10 590952 T-C 0 0 Single Base Substitution 0 HET FN3345-S Chr11 12891605 C-A 0 0 Single Base Substitution 0 Homo FN3345-S Chr11 16973826 Chr1 8708829 0 Translocation 0 LOC_Os11g29274 conserved hypothetical protein FN3345-S Chr11 23637084 23637085 0 0 Insertion 1 HET FN3345-S Chr12 11418509 11418514 0 0 Deletion 5 Homo FN3345-S Chr12 13226138 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g23374 retrotransposon protein, putative, unclassified FN3345-S Chr12 16345339 16345340 0 0 Deletion 1 Homo FN3345-S Chr12 16593979 C-T 0 0 Single Base Substitution 0 Homo FN3345-S Chr12 25857006 T-A 0 0 Single Base Substitution 0 Homo FN3345-S Chr12 3269686 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g06720 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr12 7191314 A-T 0 0 Single Base Substitution 0 HET FN3345-S Chr2 14983935 Chr1 20917473 0 Translocation 0 FN3345-S Chr2 2586813 G-A 0 0 Single Base Substitution 0 HET FN3345-S Chr2 27116024 A-G 0 0 Single Base Substitution 0 HET FN3345-S Chr2 28728446 C-T 0 0 Single Base Substitution 0 HET FN3345-S Chr2 30075691 G-A 0 0 Single Base Substitution 0 HET FN3345-S Chr3 13952483 T-C 0 0 Single Base Substitution 0 HET FN3345-S Chr3 151486 G-C 0 0 Single Base Substitution 0 Homo FN3345-S Chr3 22141554 G-C 0 0 Single Base Substitution 0 HET FN3345-S Chr3 22147578 22147580 0 0 Insertion 2 HET FN3345-S Chr3 22196267 C-A 0 0 Single Base Substitution 0 HET FN3345-S Chr3 26229065 C-A 0 0 Single Base Substitution 0 HET FN3345-S Chr3 30215260 T-C 0 0 Single Base Substitution 0 Homo FN3345-S Chr3 30693700 A-T 0 0 Single Base Substitution 0 Homo FN3345-S Chr3 30707430 30707446 0 0 Deletion 16 Homo FN3345-S Chr3 35512115 G-A 0 0 Single Base Substitution 0 Homo FN3345-S Chr4 19541831 G-A 0 0 Single Base Substitution 0 Homo FN3345-S Chr4 19557042 19557053 0 0 Deletion 11 HET FN3345-S Chr4 23671412 G-A 0 0 Single Base Substitution 0 HET FN3345-S Chr4 3539292 G-T 0 0 Single Base Substitution 0 HET FN3345-S Chr4 724557 724558 0 0 Deletion 1 HET FN3345-S Chr4 7398906 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g13310 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr5 11159102 T-C 0 0 Single Base Substitution 0 HET FN3345-S Chr5 11528309 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g19750 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3345-S Chr5 11709835 G-T 0 0 Single Base Substitution 0 HET FN3345-S Chr5 11896290 11896298 0 0 Deletion 8 HET FN3345-S Chr5 12122345 C-T 0 0 Single Base Substitution 0 Homo FN3345-S Chr5 18297418 C-T 0 0 Single Base Substitution 0 HET FN3345-S Chr5 21546018 A-G 0 0 Single Base Substitution 0 HET FN3345-S Chr5 4797266 A-T 0 0 Single Base Substitution 0 Homo FN3345-S Chr6 11326738 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g19830 retrotransposon protein, putative, unclassified FN3345-S Chr6 17696349 17696357 0 0 Deletion 8 Homo FN3345-S Chr6 24164521 24164533 0 0 Deletion 12 HET FN3345-S Chr6 613764 C-T 0 0 Single Base Substitution 0 HET FN3345-S Chr6 6959951 C-T 0 0 Single Base Substitution 0 Homo FN3345-S Chr6 970104 C-T 0 0 Single Base Substitution 0 HET FN3345-S Chr7 10489927 G-A 0 0 Single Base Substitution 0 HET FN3345-S Chr7 11853183 G-T 0 0 Single Base Substitution 0 HET FN3345-S Chr7 12735980 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g22620 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr7 25989774 25989777 0 0 Deletion 3 disruptive_inframe_deletion Homo LOC_Os07g43410 expressed protein FN3345-S Chr7 26530107 G-A 0 0 Single Base Substitution 0 Homo FN3345-S Chr7 29641997 C-T 0 0 Single Base Substitution 0 HET FN3345-S Chr7 9369962 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g16070 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr8 2551764 C-T 0 0 Single Base Substitution 0 HET FN3345-S Chr8 3347906 3347908 0 0 Insertion 2 HET FN3345-S Chr8 4162859 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g07410 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr8 604495 Chr1 36878194 0 Translocation 0 FN3345-S Chr8 6510405 6708239 0 0 Inversion 0 FN3345-S Chr8 6510405 6708239 0 0 Inversion 0 LOC_Os08g11440 retrotransposon protein, putative, unclassified FN3345-S Chr8 6510524 7207548 0 0 Inversion 0 FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11550 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11560 retrotransposon protein, putative, Ty3-gypsy subclass FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11590 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11599 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11610 retrotransposon protein, putative, unclassified FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11630 retrotransposon protein, putative, Ty3-gypsy subclass FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11640 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11650 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11660 transposon protein, putative, CACTA, En/Spm sub-class FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11669 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11680 transposon protein, putative, CACTA, En/Spm sub-class FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11690 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11700 hypothetical protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11720 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11730 retrotransposon protein, putative, unclassified FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11740 retrotransposon protein, putative, unclassified FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11760 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11770 transposon protein, putative, unclassified FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11780 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11800 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11810 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11820 transposon protein, putative, unclassified, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11840 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11860 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11870 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11880 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11890 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11900 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11910 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11940 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11950 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11970 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g11990 retrotransposon protein, putative, Ty3-gypsy subclass FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12000 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12010 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12020 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12040 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12050 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12059 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12070 retrotransposon protein, putative, unclassified FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12090 transposon protein, putative, unclassified FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12100 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12110 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12120 retrotransposon protein, putative, unclassified, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12150 retrotransposon, putative, centromere-specific, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12160 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12170 retrotransposon, putative, centromere-specific FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12180 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12190 retrotransposon protein, putative, Ty3-gypsy subclass FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12210 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12220 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12230 expressed protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12240 hypothetical protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12250 hypothetical protein FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12260 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12270 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3345-S Chr8 6762001 7231000 0 0 Deletion 468999 LOC_Os08g12280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3345-S Chr8 7256071 A-G 0 0 Single Base Substitution 0 HET FN3345-S Chr9 4076991 G-A 0 0 Single Base Substitution 0 Homo FN3345-S Chr9 5709653 G-C 0 0 Single Base Substitution 0 Homo