FN3353-S Chr1 10687404 10687412 0 0 Deletion 8 frameshift_variant HET LOC_Os01g18900 stigma specific peroxidase precursor, putative, expressed FN3353-S Chr1 24780817 C-T 0 0 Single Base Substitution 0 Homo FN3353-S Chr1 24780818 G-T 0 0 Single Base Substitution 0 Homo FN3353-S Chr1 25039721 A-T 0 0 Single Base Substitution 0 Homo FN3353-S Chr1 37672103 37672106 0 0 Deletion 3 HET FN3353-S Chr10 16765084 C-A 0 0 Single Base Substitution 0 HET FN3353-S Chr10 18983050 C-T 0 0 Single Base Substitution 0 HET FN3353-S Chr10 19892001 19926000 0 0 Deletion 33999 LOC_Os10g37180 glycine cleavage system H protein, putative, expressed FN3353-S Chr10 19892001 19926000 0 0 Deletion 33999 LOC_Os10g37190 protein kinase domain containing protein, expressed FN3353-S Chr10 19892001 19926000 0 0 Deletion 33999 LOC_Os10g37210 FAD dependent oxidoreductase domain containing protein, expressed FN3353-S Chr10 19892001 19926000 0 0 Deletion 33999 LOC_Os10g37220 hypothetical protein FN3353-S Chr10 19892001 19926000 0 0 Deletion 33999 LOC_Os10g37230 expressed protein FN3353-S Chr10 3077994 C-A 0 0 Single Base Substitution 0 HET FN3353-S Chr10 3077997 C-A 0 0 Single Base Substitution 0 HET FN3353-S Chr10 5622378 C-A 0 0 Single Base Substitution 0 Homo FN3353-S Chr10 9741432 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g19130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3353-S Chr11 12791473 G-A 0 0 Single Base Substitution 0 HET FN3353-S Chr11 15829795 G-A 0 0 Single Base Substitution 0 HET FN3353-S Chr11 19952878 C-A 0 0 Single Base Substitution 0 HET FN3353-S Chr11 7106183 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g12620 receptor protein kinase CLAVATA1 precursor, putative, expressed FN3353-S Chr12 12328883 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g21890 PTEN, putative, expressed FN3353-S Chr12 15869030 15869031 0 0 Deletion 1 Homo FN3353-S Chr12 3225860 3225861 0 0 Deletion 1 HET FN3353-S Chr2 12960704 T-A 0 0 Single Base Substitution 0 HET FN3353-S Chr2 13148658 T-A 0 0 Single Base Substitution 0 HET FN3353-S Chr2 27300222 27300615 0 0 Inversion 0 FN3353-S Chr2 8692280 8692284 0 0 Deletion 4 HET FN3353-S Chr2 9244220 9244228 0 0 Insertion 8 HET FN3353-S Chr3 14623960 A-G 0 0 Single Base Substitution 0 HET FN3353-S Chr3 14623961 A-G 0 0 Single Base Substitution 0 HET FN3353-S Chr3 15149139 15149140 0 0 Deletion 1 HET FN3353-S Chr3 16643399 16643403 0 0 Insertion 4 HET FN3353-S Chr3 3274971 3274973 0 0 Deletion 2 HET FN3353-S Chr3 32855410 G-A 0 0 Single Base Substitution 0 Homo FN3353-S Chr3 33339248 33339263 0 0 Deletion 15 Homo FN3353-S Chr3 8333292 C-T 0 0 Single Base Substitution 0 HET FN3353-S Chr4 21228483 C-T 0 0 Single Base Substitution 0 HET FN3353-S Chr4 21940620 21940624 0 0 Deletion 4 HET FN3353-S Chr4 24857879 24857885 0 0 Deletion 6 Homo FN3353-S Chr4 32477989 C-T 0 0 Single Base Substitution 0 HET FN3353-S Chr4 9894099 A-G 0 0 Single Base Substitution 0 HET FN3353-S Chr5 11789843 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g20150 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed FN3353-S Chr5 15718935 T-G 0 0 Single Base Substitution 0 Homo FN3353-S Chr5 16207401 16207409 0 0 Deletion 8 HET FN3353-S Chr5 18309064 C-G 0 0 Single Base Substitution 0 HET FN3353-S Chr5 18644081 G-A 0 0 Single Base Substitution 0 HET FN3353-S Chr5 18644085 G-C 0 0 Single Base Substitution 0 HET FN3353-S Chr5 22724605 22724607 0 0 Deletion 2 HET FN3353-S Chr5 26515962 A-T 0 0 Single Base Substitution 0 HET FN3353-S Chr5 28392290 28392316 0 0 Deletion 26 frameshift_variant&splice_donor_variant&splice_region_variant&intron_variant Homo LOC_Os05g49520 CTP synthase, putative, expressed FN3353-S Chr5 28417930 28417931 0 0 Deletion 1 Homo FN3353-S Chr5 4500597 A-G 0 0 Single Base Substitution 0 Homo FN3353-S Chr6 13136836 C-T 0 0 Single Base Substitution 0 Homo FN3353-S Chr6 13175661 13175664 0 0 Deletion 3 Homo FN3353-S Chr6 13645515 13645697 0 0 Deletion 182 HET FN3353-S Chr6 1401414 C-T 0 0 Single Base Substitution 0 Homo FN3353-S Chr6 24905810 A-T 0 0 Single Base Substitution 0 HET FN3353-S Chr6 30557225 A-G 0 0 Single Base Substitution 0 HET FN3353-S Chr6 30707722 30707725 0 0 Deletion 3 HET FN3353-S Chr6 3129535 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g06660 expressed protein FN3353-S Chr6 5537862 Chr4 8208164 0 Translocation 0 FN3353-S Chr6 9639783 9639827 0 0 Insertion 44 HET FN3353-S Chr7 11802579 C-A 0 0 Single Base Substitution 0 HET FN3353-S Chr7 15364921 15364936 0 0 Deletion 15 Homo FN3353-S Chr7 264958 264960 0 0 Insertion 2 HET FN3353-S Chr7 4578365 A-T 0 0 Single Base Substitution 0 HET FN3353-S Chr8 11519057 C-A 0 0 Single Base Substitution 0 HET FN3353-S Chr8 14036590 14036597 0 0 Deletion 7 HET FN3353-S Chr8 18378642 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g29910 prenyltransferase, putative FN3353-S Chr8 18378644 C-T 0 0 Single Base Substitution 0 HET FN3353-S Chr8 9695800 C-G 0 0 Single Base Substitution 0 HET FN3353-S Chr9 10006883 Chr5 18944866 0 Translocation 0 FN3353-S Chr9 10006883 Chr5 18944866 0 Translocation 0 LOC_Os05g32450 expressed protein FN3353-S Chr9 10046746 Chr5 18944876 0 Translocation 0 LOC_Os05g32450 expressed protein FN3353-S Chr9 10046746 Chr5 18944876 0 Translocation 0 LOC_Os09g16430 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3353-S Chr9 17057336 17057353 0 0 Deletion 17 HET FN3353-S Chr9 7502025 7506855 0 0 Inversion 0 FN3353-S Chr9 9984420 10006910 0 0 Inversion 0