FN3366-S Chr1 18146890 A-G 0 0 Single Base Substitution 0 Homo FN3366-S Chr1 25381841 25381842 0 0 Deletion 1 HET FN3366-S Chr1 32321050 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g56130 CSLC1 - cellulose synthase-like family C, expressed FN3366-S Chr1 34680010 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g59980 zinc finger family protein, putative, expressed FN3366-S Chr1 38459241 38459242 0 0 Deletion 1 HET FN3366-S Chr1 39261649 C-A 0 0 Single Base Substitution 0 HET FN3366-S Chr1 946078 C-T 0 0 Single Base Substitution 0 HET FN3366-S Chr10 11510571 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g22240 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3366-S Chr10 17432807 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g33230 RNA recognition motif containing protein, putative, expressed FN3366-S Chr10 5563767 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g10140 hypothetical protein FN3366-S Chr10 9342976 9342984 0 0 Deletion 8 Homo FN3366-S Chr10 9409135 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g18550 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3366-S Chr11 10378174 G-A 0 0 Single Base Substitution 0 Homo FN3366-S Chr11 10569842 Chr9 7975569 0 Translocation 0 FN3366-S Chr11 16822468 A-G 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR HET LOC_Os11g29050 NBS-LRR type disease resistance protein, putative, expressed FN3366-S Chr11 17296351 T-G 0 0 Single Base Substitution 0 HET FN3366-S Chr11 18203607 A-G 0 0 Single Base Substitution 0 Homo FN3366-S Chr11 20086687 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g34290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3366-S Chr11 23256852 C-T 0 0 Single Base Substitution 0 HET FN3366-S Chr11 295256 C-A 0 0 Single Base Substitution 0 HET FN3366-S Chr11 9197882 C-T 0 0 Single Base Substitution 0 HET FN3366-S Chr12 15491873 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g26500 retrotransposon protein, putative, unclassified, expressed FN3366-S Chr12 24885291 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g40200 expressed protein FN3366-S Chr12 3802884 A-G 0 0 Single Base Substitution 0 HET FN3366-S Chr12 3850041 Chr4 6856484 0 Translocation 0 LOC_Os12g07650 OsGrx_S16 - glutaredoxin subgroup II, expressed FN3366-S Chr12 3850057 Chr4 5778478 0 Translocation 0 LOC_Os04g10630 expressed protein FN3366-S Chr12 3850057 Chr4 5778478 0 Translocation 0 LOC_Os12g07650 OsGrx_S16 - glutaredoxin subgroup II, expressed FN3366-S Chr12 3908904 C-T 0 0 Single Base Substitution 0 HET FN3366-S Chr12 4351847 C-T 0 0 Single Base Substitution 0 HET FN3366-S Chr2 10664060 C-A 0 0 Single Base Substitution 0 HET FN3366-S Chr2 12982496 G-A 0 0 Single Base Substitution 0 HET FN3366-S Chr2 22916174 22916175 0 0 Deletion 1 Homo FN3366-S Chr2 24833303 24833306 0 0 Deletion 3 HET FN3366-S Chr2 31756351 C-G 0 0 Single Base Substitution 0 HET FN3366-S Chr2 33008329 33008330 0 0 Deletion 1 HET FN3366-S Chr2 6054897 G-C 0 0 Single Base Substitution 0 Homo FN3366-S Chr2 8617755 A-G 0 0 Single Base Substitution 0 HET FN3366-S Chr3 10697234 10697485 0 0 Inversion 0 FN3366-S Chr3 16611653 16679651 0 0 Inversion 0 FN3366-S Chr3 16611653 16679651 0 0 Inversion 0 LOC_Os03g29290 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3366-S Chr3 16611672 16679657 0 0 Inversion 0 FN3366-S Chr3 16611672 16679657 0 0 Inversion 0 LOC_Os03g29290 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3366-S Chr3 24075846 C-A 0 0 Single Base Substitution 0 HET FN3366-S Chr3 2515398 2515400 0 0 Deletion 2 HET FN3366-S Chr3 25218515 A-T 0 0 Single Base Substitution 0 HET FN3366-S Chr3 27649865 G-A 0 0 Single Base Substitution 0 HET FN3366-S Chr3 9737287 9737292 0 0 Deletion 5 frameshift_variant HET LOC_Os03g17520 CDP-alcohol phosphatidyltransferase, putative, expressed FN3366-S Chr4 14213347 C-T 0 0 Single Base Substitution 0 HET FN3366-S Chr4 15203748 A-G 0 0 Single Base Substitution 0 HET FN3366-S Chr4 18702178 G-A 0 0 Single Base Substitution 0 HET FN3366-S Chr4 23222663 C-A 0 0 Single Base Substitution 0 HET FN3366-S Chr4 25956896 C-T 0 0 Single Base Substitution 0 HET FN3366-S Chr4 27738424 Chr1 8218593 0 Translocation 0 LOC_Os04g46800 expressed protein FN3366-S Chr4 4879859 G-A 0 0 Single Base Substitution 0 HET FN3366-S Chr4 5401752 G-T 0 0 Single Base Substitution 0 HET FN3366-S Chr5 10012536 A-T 0 0 Single Base Substitution 0 HET FN3366-S Chr5 16472586 16472603 0 0 Deletion 17 HET FN3366-S Chr5 22344815 C-T 0 0 Single Base Substitution 0 HET FN3366-S Chr5 23001312 A-T 0 0 Single Base Substitution 0 HET FN3366-S Chr5 23001313 A-T 0 0 Single Base Substitution 0 HET FN3366-S Chr5 27338343 27338348 0 0 Deletion 5 HET FN3366-S Chr5 386815 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g01650 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3366-S Chr5 5154448 C-A 0 0 Single Base Substitution 0 Homo FN3366-S Chr5 8353217 8353218 0 0 Deletion 1 Homo FN3366-S Chr6 19334 19335 0 0 Insertion 1 HET FN3366-S Chr6 19749740 G-A 0 0 Single Base Substitution 0 HET FN3366-S Chr6 2277501 T-G 0 0 Single Base Substitution 0 HET FN3366-S Chr6 2277502 A-T 0 0 Single Base Substitution 0 HET FN3366-S Chr6 30176295 30176325 0 0 Deletion 30 HET FN3366-S Chr6 30860614 T-G 0 0 Single Base Substitution 0 HET FN3366-S Chr6 4189526 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g08490 X0001, putative, expressed FN3366-S Chr6 5748349 G-A 0 0 Single Base Substitution 0 HET FN3366-S Chr6 5799752 A-T 0 0 Single Base Substitution 0 HET FN3366-S Chr7 11307362 11307376 0 0 Deletion 14 HET FN3366-S Chr7 12328368 12328381 0 0 Deletion 13 HET FN3366-S Chr7 131642 G-A 0 0 Single Base Substitution 0 HET FN3366-S Chr7 14458593 G-A 0 0 Single Base Substitution 0 HET FN3366-S Chr7 1543170 Chr6 20665883 0 Translocation 0 LOC_Os07g03760 26S proteasome non-ATPase regulatory subunit 14, putative, expressed FN3366-S Chr7 18880596 T-A 0 0 Single Base Substitution 0 Homo FN3366-S Chr7 20754197 20754198 0 0 Deletion 1 Homo FN3366-S Chr7 29177508 29177512 0 0 Deletion 4 frameshift_variant HET LOC_Os07g48720 MAG2, putative, expressed FN3366-S Chr7 4680277 4680280 0 0 Deletion 3 HET FN3366-S Chr8 12037362 C-T 0 0 Single Base Substitution 0 HET FN3366-S Chr8 13608316 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g22620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3366-S Chr8 23801852 C-T 0 0 Single Base Substitution 0 Homo FN3366-S Chr8 286240 A-G 0 0 Single Base Substitution 0 HET FN3366-S Chr8 4008422 G-A 0 0 Single Base Substitution 0 HET FN3366-S Chr8 8568234 T-A 0 0 Single Base Substitution 0 Homo FN3366-S Chr9 12551292 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g20840 expressed protein FN3366-S Chr9 1564880 C-T 0 0 Single Base Substitution 0 Homo FN3366-S Chr9 3318352 G-A 0 0 Single Base Substitution 0 HET FN3366-S Chr9 7973381 T-C 0 0 Single Base Substitution 0 Homo FN3366-S Chr9 9134743 C-T 0 0 Single Base Substitution 0 HET