FN3372-S Chr1 33779982 G-T 0 0 Single Base Substitution 0 HET FN3372-S Chr1 43246914 43246915 0 0 Deletion 1 HET FN3372-S Chr10 12427593 A-G 0 0 Single Base Substitution 0 Homo FN3372-S Chr10 14197207 14197210 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os10g26960 retrotransposon protein, putative, unclassified FN3372-S Chr10 19022184 G-A 0 0 Single Base Substitution 0 Homo FN3372-S Chr10 20544859 20563641 0 0 Inversion 0 LOC_Os10g38460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3372-S Chr10 20544861 20563641 0 0 Inversion 0 LOC_Os10g38460 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3372-S Chr10 4623844 Chr3 32491467 0 Translocation 0 FN3372-S Chr10 5539893 Chr4 17668408 0 Translocation 0 LOC_Os04g29680 OsWAK38 - OsWAK receptor-like protein kinase, expressed FN3372-S Chr10 5539893 Chr4 17668408 0 Translocation 0 LOC_Os10g10130 OsWAK112d - OsWAK receptor-like protein kinase, expressed FN3372-S Chr10 6479811 6479812 0 0 Deletion 1 HET FN3372-S Chr10 6618975 Chr6 13457533 0 Translocation 0 LOC_Os06g23080 retrotransposon protein, putative, unclassified, expressed FN3372-S Chr10 6618975 Chr6 13457533 0 Translocation 0 LOC_Os10g11930 retrotransposon protein, putative, unclassified, expressed FN3372-S Chr11 13418825 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g23740 retrotransposon protein, putative, Ty1-copia subclass FN3372-S Chr11 14448491 C-T 0 0 Single Base Substitution 0 HET FN3372-S Chr11 16071961 C-A 0 0 Single Base Substitution 0 HET FN3372-S Chr11 17815345 C-A 0 0 Single Base Substitution 0 HET FN3372-S Chr11 19619708 Chr4 2530360 0 Translocation 0 FN3372-S Chr11 19619708 Chr4 2530360 0 Translocation 0 LOC_Os04g05104 retrotransposon protein, putative, unclassified, expressed FN3372-S Chr11 21793133 Chr3 10130468 0 Translocation 0 FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42260 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42270 OsFBX432 - F-box domain containing protein, expressed FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42280 OsFBX433 - F-box domain containing protein, expressed FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42290 transferase family protein, putative, expressed FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42300 OsFBX434 - F-box domain containing protein, expressed FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42310 OsFBL58 - F-box domain and LRR containing protein, expressed FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42330 retrotransposon protein, putative, Ty3-gypsy subclass FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42340 expressed protein FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42350 glutathione synthetase, chloroplast precursor, putative, expressed FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42360 expressed protein FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42370 transferase family protein, putative, expressed FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42380 expressed protein FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42390 OsSCP64 - Putative Serine Carboxypeptidase homologue, expressed FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42400 expressed protein FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42410 expressed protein FN3372-S Chr11 25451001 25536000 0 0 Deletion 84999 LOC_Os11g42420 nuclear pore protein 84/107 containing protein, expressed FN3372-S Chr11 27724750 27724816 0 0 Insertion 66 HET FN3372-S Chr11 367989 C-A 0 0 Single Base Substitution 0 HET FN3372-S Chr11 9981486 9981487 0 0 Insertion 1 HET FN3372-S Chr12 17239702 C-G 0 0 Single Base Substitution 0 HET FN3372-S Chr12 18521704 Chr9 1654382 0 Translocation 0 LOC_Os12g30824 terpene synthase, putative, expressed FN3372-S Chr12 22916707 Chr2 23806513 0 Translocation 0 FN3372-S Chr12 23667494 Chr1 14627764 0 Translocation 0 FN3372-S Chr12 23667494 Chr1 14627764 0 Translocation 0 LOC_Os01g25820 respiratory burst oxidase, putative, expressed FN3372-S Chr12 24657397 G-A 0 0 Single Base Substitution 0 Homo FN3372-S Chr2 24183807 C-G 0 0 Single Base Substitution 0 Homo FN3372-S Chr2 27088884 G-A 0 0 Single Base Substitution 0 Homo FN3372-S Chr2 5069361 A-T 0 0 Single Base Substitution 0 HET FN3372-S Chr3 13816384 C-T 0 0 Single Base Substitution 0 Homo FN3372-S Chr3 14780116 15329520 0 0 Inversion 0 FN3372-S Chr3 14780116 15329520 0 0 Inversion 0 LOC_Os03g26870 WD-40 repeat family protein, putative, expressed FN3372-S Chr3 14780131 15329533 0 0 Inversion 0 FN3372-S Chr3 14780131 15329533 0 0 Inversion 0 LOC_Os03g26870 WD-40 repeat family protein, putative, expressed FN3372-S Chr3 15789344 15789346 0 0 Insertion 2 HET FN3372-S Chr3 2355099 2355100 0 0 Deletion 1 HET FN3372-S Chr3 3028611 C-T 0 0 Single Base Substitution 0 HET FN3372-S Chr3 31275058 31275059 0 0 Deletion 1 HET FN3372-S Chr3 32710784 32710792 0 0 Deletion 8 frameshift_variant&splice_acceptor_variant&splice_region_variant&intron_variant Homo LOC_Os03g57340 chaperone protein dnaJ, putative, expressed FN3372-S Chr3 34231147 34231148 0 0 Deletion 1 frameshift_variant Homo LOC_Os03g60180 GTPase of unknown function domain containing protein, putative, expressed FN3372-S Chr3 4952193 T-C 0 0 Single Base Substitution 0 HET FN3372-S Chr4 10161613 T-A 0 0 Single Base Substitution 0 HET FN3372-S Chr4 11150609 G-T 0 0 Single Base Substitution 0 HET FN3372-S Chr4 2034630 2034632 0 0 Deletion 2 HET FN3372-S Chr4 21179046 21179063 0 0 Deletion 17 frameshift_variant HET LOC_Os04g34880 retrotransposon protein, putative, unclassified, expressed FN3372-S Chr4 24962093 Chr1 35969182 0 Translocation 0 LOC_Os04g42160 hypothetical protein FN3372-S Chr4 26242004 A-G 0 0 Single Base Substitution 0 Homo FN3372-S Chr4 28172675 28172691 0 0 Deletion 16 Homo FN3372-S Chr4 29464985 C-T 0 0 Single Base Substitution 0 Homo FN3372-S Chr4 6819793 T-G 0 0 Single Base Substitution 0 HET FN3372-S Chr4 7452431 7452432 0 0 Insertion 1 HET FN3372-S Chr5 14027495 Chr4 503956 0 Translocation 0 LOC_Os04g01790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3372-S Chr5 14027495 Chr4 503956 0 Translocation 0 LOC_Os05g24250 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3372-S Chr5 17146693 T-C 0 0 Single Base Substitution 0 HET FN3372-S Chr5 17389648 17389668 0 0 Insertion 20 HET FN3372-S Chr5 17840811 C-A 0 0 Single Base Substitution 0 Homo FN3372-S Chr5 23382598 Chr3 11740622 0 Translocation 0 FN3372-S Chr5 6422573 6439345 0 0 Inversion 0 LOC_Os05g11370 expressed protein FN3372-S Chr5 6422575 6439345 0 0 Inversion 0 LOC_Os05g11370 expressed protein FN3372-S Chr6 15224457 15224458 0 0 Deletion 1 Homo FN3372-S Chr6 16000489 C-T 0 0 Single Base Substitution 0 Homo FN3372-S Chr6 22483291 22521118 0 0 Inversion 0 FN3372-S Chr6 26238325 A-G 0 0 Single Base Substitution 0 Homo FN3372-S Chr6 29706007 29706010 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os06g49010 OsSPL12 - SBP-box gene family member, expressed FN3372-S Chr6 7290184 Chr4 4507591 0 Translocation 0 FN3372-S Chr7 6399891 Chr5 10232218 0 Translocation 0 FN3372-S Chr7 7853027 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g13680 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3372-S Chr8 11099869 11099870 0 0 Deletion 1 HET FN3372-S Chr8 17914979 Chr6 19132700 0 Translocation 0 FN3372-S Chr8 18790086 18790087 0 0 Insertion 1 HET FN3372-S Chr8 18837523 G-A 0 0 Single Base Substitution 0 HET FN3372-S Chr8 2560912 2560913 0 0 Deletion 1 frameshift_variant HET LOC_Os08g04990 retrotransposon protein, putative, unclassified, expressed FN3372-S Chr8 27473648 Chr1 3092966 0 Translocation 0 LOC_Os08g43430 CXE carboxylesterase, putative, expressed FN3372-S Chr8 5022341 5022344 0 0 Insertion 3 HET FN3372-S Chr8 7295624 G-A 0 0 Single Base Substitution 0 HET FN3372-S Chr8 8460526 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os08g14170 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3372-S Chr9 21195065 C-G 0 0 Single Base Substitution 0 Homo FN3372-S Chr9 319609 319611 0 0 Insertion 2 HET FN3372-S Chr9 9725072 Chr6 8613918 0 Translocation 0 FN3372-S Chr9 9725072 Chr6 8613918 0 Translocation 0 LOC_Os06g15200 transposon protein, putative, CACTA, En/Spm sub-class, expressed