FN3376-S Chr1 1138838 G-A 0 0 Single Base Substitution 0 HET FN3376-S Chr1 13672776 C-T 0 0 Single Base Substitution 0 Homo FN3376-S Chr1 26582459 26582461 0 0 Insertion 2 HET FN3376-S Chr1 34011209 C-T 0 0 Single Base Substitution 0 HET FN3376-S Chr1 38731392 A-T 0 0 Single Base Substitution 0 HET FN3376-S Chr1 4169727 T-G 0 0 Single Base Substitution 0 HET FN3376-S Chr10 2551930 2551931 0 0 Insertion 1 HET FN3376-S Chr10 3221359 C-T 0 0 Single Base Substitution 0 HET FN3376-S Chr10 7294619 7294622 0 0 Deletion 3 HET FN3376-S Chr10 9768741 A-G 0 0 Single Base Substitution 0 HET FN3376-S Chr11 16956539 Chr6 4179223 0 Translocation 0 FN3376-S Chr11 16956539 Chr6 4179223 0 Translocation 0 LOC_Os06g08480 CHD3-type chromatin-remodeling factor PICKLE, putative, expressed FN3376-S Chr11 16956860 Chr6 4178319 0 Translocation 0 FN3376-S Chr11 16956860 Chr6 4178319 0 Translocation 0 LOC_Os06g08480 CHD3-type chromatin-remodeling factor PICKLE, putative, expressed FN3376-S Chr11 21886438 21886447 0 0 Deletion 9 Homo FN3376-S Chr11 25546240 C-T 0 0 Single Base Substitution 0 Homo FN3376-S Chr12 13077372 C-T 0 0 Single Base Substitution 0 HET FN3376-S Chr12 15828238 15828581 0 0 Inversion 0 FN3376-S Chr12 15828238 15828581 0 0 Inversion 0 LOC_Os12g27025 expressed protein FN3376-S Chr12 17083659 T-A 0 0 Single Base Substitution 0 HET FN3376-S Chr12 3826918 C-A 0 0 Single Base Substitution 0 HET FN3376-S Chr12 395411 395429 0 0 Deletion 18 HET FN3376-S Chr2 10199560 T-A 0 0 Single Base Substitution 0 Homo FN3376-S Chr2 16112957 T-A 0 0 Single Base Substitution 0 Homo FN3376-S Chr2 19802229 Chr1 33760538 0 Translocation 0 FN3376-S Chr2 21835062 21835072 0 0 Deletion 10 Homo FN3376-S Chr2 22772934 22772936 0 0 Deletion 2 Homo FN3376-S Chr2 26607085 T-G 0 0 Single Base Substitution 0 Homo FN3376-S Chr2 33923704 33923705 0 0 Deletion 1 HET FN3376-S Chr2 34832010 34832017 0 0 Deletion 7 HET FN3376-S Chr2 4581691 A-G 0 0 Single Base Substitution 0 HET FN3376-S Chr3 13479986 G-T 0 0 Single Base Substitution 0 HET FN3376-S Chr3 13479987 C-T 0 0 Single Base Substitution 0 HET FN3376-S Chr3 15565928 15565933 0 0 Deletion 5 Homo FN3376-S Chr3 1576442 T-A 0 0 Single Base Substitution 0 HET FN3376-S Chr3 15810976 15810988 0 0 Deletion 12 Homo FN3376-S Chr3 16099922 16099924 0 0 Deletion 2 frameshift_variant HET LOC_Os03g28010 retrotransposon protein, putative, unclassified, expressed FN3376-S Chr3 16841980 G-T 0 0 Single Base Substitution 0 Homo FN3376-S Chr3 1838424 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g04030 HVA22, putative, expressed FN3376-S Chr3 2004304 2004305 0 0 Insertion 1 frameshift_variant HET LOC_Os03g04340 C-methyltransferase, putative, expressed FN3376-S Chr3 23665874 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g42530 retrotransposon, putative, centromere-specific, expressed FN3376-S Chr3 2987476 A-G 0 0 Single Base Substitution 0 HET FN3376-S Chr3 31313821 31314070 0 0 Inversion 0 FN3376-S Chr3 35381390 35381391 0 0 Deletion 1 frameshift_variant HET LOC_Os03g62480 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed FN3376-S Chr3 9695426 9695427 0 0 Deletion 1 frameshift_variant Homo LOC_Os03g17426 expressed protein FN3376-S Chr4 15325223 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g26290 retrotransposon protein, putative, unclassified, expressed FN3376-S Chr4 24416194 G-A 0 0 Single Base Substitution 0 Homo FN3376-S Chr4 26209510 26209511 0 0 Deletion 1 Homo FN3376-S Chr4 30190229 C-T 0 0 Single Base Substitution 0 HET FN3376-S Chr4 3108243 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g06000 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3376-S Chr4 34673497 34673499 0 0 Deletion 2 frameshift_variant Homo LOC_Os04g58230 transporter family protein, putative, expressed FN3376-S Chr4 6883935 6883936 0 0 Deletion 1 HET FN3376-S Chr5 11352434 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g19530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3376-S Chr5 18217872 T-C 0 0 Single Base Substitution 0 HET FN3376-S Chr5 20369899 T-A 0 0 Single Base Substitution 0 HET FN3376-S Chr5 23131082 C-T 0 0 Single Base Substitution 0 HET FN3376-S Chr5 26129485 26129486 0 0 Deletion 1 HET FN3376-S Chr5 28065678 T-C 0 0 Single Base Substitution 0 HET FN3376-S Chr6 11319208 C-T 0 0 Single Base Substitution 0 HET FN3376-S Chr6 14606073 14606090 0 0 Deletion 17 Homo FN3376-S Chr6 24387851 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g40900 retrotransposon protein, putative, unclassified, expressed FN3376-S Chr6 3664775 T-A 0 0 Single Base Substitution 0 HET FN3376-S Chr6 5742812 5742813 0 0 Deletion 1 HET FN3376-S Chr7 11306196 11306197 0 0 Deletion 1 HET FN3376-S Chr7 11354208 11750971 0 0 Inversion 0 FN3376-S Chr7 11354208 11750971 0 0 Inversion 0 LOC_Os07g20360 retrotransposon protein, putative, unclassified, expressed FN3376-S Chr7 19611413 T-A 0 0 Single Base Substitution 0 HET FN3376-S Chr7 21582576 A-C 0 0 Single Base Substitution 0 Homo FN3376-S Chr8 13885817 C-T 0 0 Single Base Substitution 0 HET FN3376-S Chr8 14335980 14335982 0 0 Deletion 2 HET FN3376-S Chr8 14514557 C-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os08g23990 retrotransposon protein, putative, unclassified, expressed FN3376-S Chr8 21972972 21972973 0 0 Deletion 1 HET FN3376-S Chr8 2207349 2207354 0 0 Deletion 5 frameshift_variant HET LOC_Os08g04490 expressed protein FN3376-S Chr8 2808649 G-A 0 0 Single Base Substitution 0 Homo FN3376-S Chr8 5226459 G-A 0 0 Single Base Substitution 0 HET FN3376-S Chr8 6226337 6226343 0 0 Deletion 6 HET FN3376-S Chr8 6625934 6625935 0 0 Insertion 1 HET FN3376-S Chr9 1548645 1548646 0 0 Insertion 1 Homo FN3376-S Chr9 271479 G-C 0 0 Single Base Substitution 0 Homo FN3376-S Chr9 5747435 G-A 0 0 Single Base Substitution 0 HET FN3376-S Chr9 8226361 8226362 0 0 Deletion 1 Homo FN3376-S Chr9 9338407 A-G 0 0 Single Base Substitution 0 HET