FN3398-S Chr1 10903364 10903365 0 0 Deletion 1 HET FN3398-S Chr1 7388019 7388020 0 0 Deletion 1 Homo FN3398-S Chr1 7821852 7821856 0 0 Insertion 4 HET FN3398-S Chr10 10473076 Chr1 18784334 0 Translocation 0 FN3398-S Chr10 11334327 G-A 0 0 Single Base Substitution 0 HET FN3398-S Chr10 13764672 Chr2 29617587 0 Translocation 0 FN3398-S Chr10 17294987 G-A 0 0 Single Base Substitution 0 HET FN3398-S Chr10 21689157 21689159 0 0 Insertion 2 HET FN3398-S Chr10 4934277 C-A 0 0 Single Base Substitution 0 HET FN3398-S Chr10 6864474 Chr7 15626068 0 Translocation 0 LOC_Os10g12330 retrotransposon protein, putative, unclassified, expressed FN3398-S Chr10 701702 701703 0 0 Deletion 1 HET FN3398-S Chr11 11640786 T-C 0 0 Single Base Substitution 0 HET FN3398-S Chr11 12189303 12189447 0 0 Deletion 144 HET FN3398-S Chr11 13563925 G-A 0 0 Single Base Substitution 0 HET FN3398-S Chr11 1791470 1791471 0 0 Deletion 1 frameshift_variant Homo LOC_Os11g04300 retrotransposon protein, putative, unclassified, expressed FN3398-S Chr11 24867110 C-A 0 0 Single Base Substitution 0 HET FN3398-S Chr11 24995436 A-G 0 0 Single Base Substitution 0 HET FN3398-S Chr11 28681302 Chr4 575035 0 Translocation 0 FN3398-S Chr11 28718357 Chr8 25742856 0 Translocation 0 FN3398-S Chr11 28718357 Chr8 25742856 0 Translocation 0 LOC_Os08g40650 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN3398-S Chr11 28752368 Chr1 19234999 0 Translocation 0 FN3398-S Chr12 13082873 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g23130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3398-S Chr12 25851987 25851988 0 0 Insertion 1 frameshift_variant&stop_gained HET LOC_Os12g41730 retrotransposon protein, putative, unclassified, expressed FN3398-S Chr12 4811001 4819000 0 0 Deletion 7999 LOC_Os12g09220 expressed protein FN3398-S Chr2 10394391 Chr1 11768771 0 Translocation 0 FN3398-S Chr2 15586692 C-T 0 0 Single Base Substitution 0 HET FN3398-S Chr2 20392983 C-T 0 0 Single Base Substitution 0 HET FN3398-S Chr2 34540350 34540351 0 0 Deletion 1 HET FN3398-S Chr2 4301914 4301916 0 0 Deletion 2 Homo FN3398-S Chr2 8352838 8352840 0 0 Insertion 2 HET FN3398-S Chr3 19648163 19648164 0 0 Deletion 1 frameshift_variant HET LOC_Os03g35440 retrotransposon protein, putative, Ty3-gypsy subclass FN3398-S Chr3 20462947 20462948 0 0 Insertion 1 frameshift_variant HET LOC_Os03g36880 retrotransposon protein, putative, unclassified, expressed FN3398-S Chr3 23311118 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g41960 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3398-S Chr3 9430613 9430631 0 0 Deletion 18 Homo FN3398-S Chr4 153264 G-A 0 0 Single Base Substitution 0 HET FN3398-S Chr4 22689646 22689647 0 0 Insertion 1 HET FN3398-S Chr4 31852910 A-G 0 0 Single Base Substitution 0 HET FN3398-S Chr5 12624100 A-C 0 0 Single Base Substitution 0 HET FN3398-S Chr5 12624107 G-A 0 0 Single Base Substitution 0 HET FN3398-S Chr5 21214537 G-A 0 0 Single Base Substitution 0 HET FN3398-S Chr5 21503848 21573930 0 0 Inversion 0 LOC_Os05g36290 actin, putative, expressed FN3398-S Chr5 21503849 21574005 0 0 Inversion 0 LOC_Os05g36290 actin, putative, expressed FN3398-S Chr5 22373556 T-C 0 0 Single Base Substitution 0 HET FN3398-S Chr5 27983619 C-A 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR Homo LOC_Os05g48820 DDT, putative, expressed FN3398-S Chr5 9337660 C-A 0 0 Single Base Substitution 0 HET FN3398-S Chr6 11079933 G-A 0 0 Single Base Substitution 0 HET FN3398-S Chr6 13493145 A-G 0 0 Single Base Substitution 0 HET FN3398-S Chr6 14238020 14238021 0 0 Deletion 1 HET FN3398-S Chr6 16397727 T-G 0 0 Single Base Substitution 0 HET FN3398-S Chr6 16397728 G-A 0 0 Single Base Substitution 0 HET FN3398-S Chr6 24654489 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g41200 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3398-S Chr6 27896213 G-A 0 0 Single Base Substitution 0 Homo FN3398-S Chr6 28338913 A-G 0 0 Single Base Substitution 0 Homo FN3398-S Chr7 11798568 11798569 0 0 Deletion 1 frameshift_variant HET LOC_Os07g20430 transposon protein, putative, unclassified, expressed FN3398-S Chr7 18123696 18123846 0 0 Deletion 150 HET FN3398-S Chr7 2053681 A-G 0 0 Single Base Substitution 0 HET FN3398-S Chr7 28114885 C-A 0 0 Single Base Substitution 0 Homo FN3398-S Chr7 4958459 Chr6 17234847 0 Translocation 0 LOC_Os07g09400 RNA ligase isoform 1, putative, expressed FN3398-S Chr7 9026353 Chr2 7996989 0 Translocation 0 FN3398-S Chr7 9599696 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g16400 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3398-S Chr8 12047485 G-A 0 0 Single Base Substitution 0 HET FN3398-S Chr8 21158695 G-A 0 0 Single Base Substitution 0 HET FN3398-S Chr8 22768890 C-T 0 0 Single Base Substitution 0 HET FN3398-S Chr8 9934134 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g16270 retrotransposon protein, putative, unclassified, expressed FN3398-S Chr9 12257248 12257250 0 0 Deletion 2 HET FN3398-S Chr9 14010406 C-T 0 0 Single Base Substitution 0 HET FN3398-S Chr9 1409116 Chr1 23461414 0 Translocation 0 FN3398-S Chr9 1409116 Chr1 23461414 0 Translocation 0 LOC_Os01g41440 retrotransposon protein, putative, unclassified FN3398-S Chr9 20652834 C-T 0 0 Single Base Substitution 0 HET