FN3417-S Chr1 20603479 C-T 0 0 Single Base Substitution 0 HET FN3417-S Chr1 33691579 A-G 0 0 Single Base Substitution 0 Homo FN3417-S Chr1 41219356 A-T 0 0 Single Base Substitution 0 Homo FN3417-S Chr1 5467001 5507000 0 0 Deletion 39999 LOC_Os01g10380 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3417-S Chr1 5467001 5507000 0 0 Deletion 39999 LOC_Os01g10390 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3417-S Chr1 5467001 5507000 0 0 Deletion 39999 LOC_Os01g10400 expressed protein FN3417-S Chr1 5467001 5507000 0 0 Deletion 39999 LOC_Os01g10410 transposon protein, putative, unclassified FN3417-S Chr1 5467001 5507000 0 0 Deletion 39999 LOC_Os01g10420 expressed protein FN3417-S Chr1 5467001 5507000 0 0 Deletion 39999 LOC_Os01g10430 protein kinase family protein, putative, expressed FN3417-S Chr1 8486024 8486025 0 0 Deletion 1 HET FN3417-S Chr10 12382341 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g24170 retrotransposon protein, putative, unclassified FN3417-S Chr10 12382343 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g24170 retrotransposon protein, putative, unclassified FN3417-S Chr10 9752536 9752537 0 0 Deletion 1 HET FN3417-S Chr11 13483178 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g23820 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3417-S Chr11 14100823 T-C 0 0 Single Base Substitution 0 Homo FN3417-S Chr11 5263697 Chr7 10477200 0 Translocation 0 FN3417-S Chr11 8196297 Chr4 13912048 0 Translocation 0 FN3417-S Chr12 12173098 A-G 0 0 Single Base Substitution 0 Homo FN3417-S Chr12 22800132 Chr8 17299284 0 Translocation 0 LOC_Os08g28350 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3417-S Chr12 22800132 Chr8 17299284 0 Translocation 0 LOC_Os12g37180 transposon protein, putative, CACTA, En/Spm sub-class FN3417-S Chr12 23020175 T-C 0 0 Single Base Substitution 0 HET FN3417-S Chr12 26474494 G-A 0 0 Single Base Substitution 0 HET FN3417-S Chr12 27049564 Chr6 6604742 0 Translocation 0 LOC_Os12g43580 expressed protein FN3417-S Chr2 20697209 20697211 0 0 Deletion 2 HET FN3417-S Chr2 21745621 A-T 0 0 Single Base Substitution 0 Homo FN3417-S Chr2 27517627 G-C 0 0 Single Base Substitution 0 HET FN3417-S Chr2 29081136 G-C 0 0 Single Base Substitution 0 HET FN3417-S Chr2 3529092 3529093 0 0 Deletion 1 HET FN3417-S Chr3 14005514 T-C 0 0 Single Base Substitution 0 Homo FN3417-S Chr3 18902132 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g33044 retrotransposon protein, putative, unclassified, expressed FN3417-S Chr3 19476913 Chr2 35887263 0 Translocation 0 LOC_Os03g34200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3417-S Chr3 19477835 Chr2 35887279 0 Translocation 0 FN3417-S Chr3 26046724 26047008 0 0 Inversion 0 FN3417-S Chr3 6390829 6390833 0 0 Deletion 4 HET FN3417-S Chr3 7389994 G-T 0 0 Single Base Substitution 0 HET FN3417-S Chr3 757062 G-T 0 0 Single Base Substitution 0 HET FN3417-S Chr4 14007052 14007054 0 0 Deletion 2 Homo FN3417-S Chr4 15781417 C-T 0 0 Single Base Substitution 0 Homo FN3417-S Chr4 20977918 C-T 0 0 Single Base Substitution 0 HET FN3417-S Chr4 22354666 22354678 0 0 Deletion 12 inframe_deletion HET LOC_Os04g37570 aspartic proteinase nepenthesin precursor, putative, expressed FN3417-S Chr4 25972468 26015940 0 0 Inversion 0 FN3417-S Chr4 25972468 26015940 0 0 Inversion 0 LOC_Os04g43910 auxin response factor, putative, expressed FN3417-S Chr4 25972497 26015943 0 0 Inversion 0 FN3417-S Chr4 25972497 26015943 0 0 Inversion 0 LOC_Os04g43910 auxin response factor, putative, expressed FN3417-S Chr4 8657833 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g15944 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3417-S Chr5 16868216 T-A 0 0 Single Base Substitution 0 HET FN3417-S Chr5 17251478 17252344 0 0 Inversion 0 FN3417-S Chr5 17251482 17252350 0 0 Inversion 0 FN3417-S Chr5 2699492 2699497 0 0 Deletion 5 HET FN3417-S Chr6 11670019 11670023 0 0 Deletion 4 HET FN3417-S Chr6 12909769 C-T 0 0 Single Base Substitution 0 HET FN3417-S Chr6 13507643 Chr1 24726876 0 Translocation 0 FN3417-S Chr6 23590120 23590121 0 0 Insertion 1 frameshift_variant HET LOC_Os06g39740 ATP synthase subunit beta, putative, expressed FN3417-S Chr6 23618203 C-T 0 0 Single Base Substitution 0 HET FN3417-S Chr6 26489014 27055570 0 0 Inversion 0 FN3417-S Chr6 26489688 Chr2 3752325 0 Translocation 0 LOC_Os02g07310 argonaute, putative, expressed FN3417-S Chr6 26489688 Chr2 3752325 0 Translocation 0 LOC_Os06g43970 expressed protein FN3417-S Chr6 26489698 27055575 0 0 Inversion 0 LOC_Os06g43970 expressed protein FN3417-S Chr6 26820408 T-A 0 0 Single Base Substitution 0 HET FN3417-S Chr6 27760217 Chr5 17609511 0 Translocation 0 FN3417-S Chr6 27760217 Chr5 17609511 0 Translocation 0 LOC_Os05g30380 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3417-S Chr6 29512619 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g48760 UTP--glucose-1-phosphate uridylyltransferase, putative, expressed FN3417-S Chr7 11524319 G-A 0 0 Single Base Substitution 0 HET FN3417-S Chr7 15484761 T-G 0 0 Single Base Substitution 0 HET FN3417-S Chr8 17595770 17595771 0 0 Deletion 1 frameshift_variant HET LOC_Os08g28760 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3417-S Chr8 18279271 T-A 0 0 Single Base Substitution 0 HET FN3417-S Chr8 21261835 21261848 0 0 Deletion 13 HET FN3417-S Chr8 6481005 G-T 0 0 Single Base Substitution 0 Homo FN3417-S Chr9 11164488 11164492 0 0 Insertion 4 HET FN3417-S Chr9 14660804 14660805 0 0 Deletion 1 HET FN3417-S Chr9 16157564 T-C 0 0 Single Base Substitution 0 HET FN3417-S Chr9 9765905 Chr2 6850978 0 Translocation 0