FN3438-S Chr1 11956977 A-T 0 0 Single Base Substitution 0 HET FN3438-S Chr1 11956978 A-T 0 0 Single Base Substitution 0 HET FN3438-S Chr1 13713543 13713545 0 0 Deletion 2 frameshift_variant HET LOC_Os01g24340 expressed protein FN3438-S Chr1 13822543 13822545 0 0 Insertion 2 HET FN3438-S Chr1 17063111 G-A 0 0 Single Base Substitution 0 HET FN3438-S Chr1 18329138 C-T 0 0 Single Base Substitution 0 HET FN3438-S Chr1 18598239 18598543 0 0 Inversion 0 FN3438-S Chr1 22763030 22763032 0 0 Insertion 2 HET FN3438-S Chr1 23421928 23421929 0 0 Deletion 1 HET FN3438-S Chr1 2344171 A-T 0 0 Single Base Substitution 0 Homo FN3438-S Chr1 30650954 G-T 0 0 Single Base Substitution 0 HET FN3438-S Chr1 32288447 T-G 0 0 Single Base Substitution 0 HET FN3438-S Chr1 35492399 G-A 0 0 Single Base Substitution 0 HET FN3438-S Chr10 2751942 C-A 0 0 Single Base Substitution 0 Homo FN3438-S Chr11 1365392 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g03540 AP2 domain containing protein, expressed FN3438-S Chr11 1424935 C-T 0 0 Single Base Substitution 0 HET FN3438-S Chr11 14501254 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g25440 expressed protein FN3438-S Chr11 18255057 C-T 0 0 Single Base Substitution 0 Homo FN3438-S Chr11 23561633 A-T 0 0 Single Base Substitution 0 HET FN3438-S Chr11 24118545 A-T 0 0 Single Base Substitution 0 Homo FN3438-S Chr11 25831477 25831483 0 0 Insertion 6 HET FN3438-S Chr11 2693459 2693469 0 0 Deletion 10 HET FN3438-S Chr11 672064 C-T 0 0 Single Base Substitution 0 HET FN3438-S Chr12 11085206 C-T 0 0 Single Base Substitution 0 HET FN3438-S Chr12 11679951 G-T 0 0 Single Base Substitution 0 HET FN3438-S Chr12 11870916 T-C 0 0 Single Base Substitution 0 HET FN3438-S Chr12 1821210 T-A 0 0 Single Base Substitution 0 Homo FN3438-S Chr12 22895893 22895901 0 0 Deletion 8 frameshift_variant HET LOC_Os12g37300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3438-S Chr12 23058547 Chr7 23012613 0 Translocation 0 FN3438-S Chr12 27132109 27132120 0 0 Deletion 11 HET FN3438-S Chr12 4527845 A-T 0 0 Single Base Substitution 0 HET FN3438-S Chr12 9999117 C-T 0 0 Single Base Substitution 0 HET FN3438-S Chr2 13534978 C-T 0 0 Single Base Substitution 0 Homo FN3438-S Chr2 1826526 A-C 0 0 Single Base Substitution 0 HET FN3438-S Chr2 21673332 A-G 0 0 Single Base Substitution 0 Homo FN3438-S Chr2 26035030 T-G 0 0 Single Base Substitution 0 Homo FN3438-S Chr2 27940492 G-T 0 0 Single Base Substitution 0 Homo FN3438-S Chr2 30538115 30538117 0 0 Insertion 2 HET FN3438-S Chr2 3616218 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g07050 pentatricopeptide, putative, expressed FN3438-S Chr2 3724430 3724431 0 0 Deletion 1 frameshift_variant Homo LOC_Os02g07250 peptidase, cysteine peptidase active site, putative, expressed FN3438-S Chr2 5097571 5097573 0 0 Deletion 2 HET FN3438-S Chr2 5180391 5180610 0 0 Inversion 0 LOC_Os02g09960 LYK8, putative, expressed FN3438-S Chr3 12239916 T-C 0 0 Single Base Substitution 0 HET FN3438-S Chr3 13342004 C-T 0 0 Single Base Substitution 0 HET FN3438-S Chr3 14949078 14949079 0 0 Deletion 1 Homo FN3438-S Chr3 15899018 15899020 0 0 Insertion 2 HET FN3438-S Chr3 17199909 G-A 0 0 Single Base Substitution 0 HET FN3438-S Chr3 19079733 C-T 0 0 Single Base Substitution 0 Homo FN3438-S Chr3 29064796 T-A 0 0 Single Base Substitution 0 HET FN3438-S Chr3 29601389 29601391 0 0 Deletion 2 HET FN3438-S Chr3 31989547 C-T 0 0 Single Base Substitution 0 HET FN3438-S Chr3 36063105 T-C 0 0 Single Base Substitution 0 HET FN3438-S Chr4 1305893 G-A 0 0 Single Base Substitution 0 HET FN3438-S Chr4 3826086 3826092 0 0 Deletion 6 inframe_deletion HET LOC_Os04g07200 S-domain receptor-like protein kinase, putative, expressed FN3438-S Chr4 6489920 C-A 0 0 Single Base Substitution 0 HET FN3438-S Chr5 10776599 10776601 0 0 Insertion 2 HET FN3438-S Chr5 10905980 Chr2 18947428 0 Translocation 0 FN3438-S Chr5 10908553 T-C 0 0 Single Base Substitution 0 HET FN3438-S Chr5 11104093 Chr2 18996321 0 Translocation 0 LOC_Os02g32160 copine, putative, expressed FN3438-S Chr5 11104093 Chr2 18996321 0 Translocation 0 LOC_Os05g19140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3438-S Chr5 11128475 11128476 0 0 Insertion 1 HET FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19210 retrotransposon protein, putative, unclassified, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19230 retrotransposon protein, putative, Ty3-gypsy subclass FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19240 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19250 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19260 retrotransposon protein, putative, Ty1-copia subclass FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19270 MSH-like DNA mismatch repair protein, putative, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19280 expressed protein FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19290 expressed protein FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19300 expressed protein FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19310 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19330 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19350 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19360 expressed protein FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19370 60S ribosomal protein L15, putative, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19380 pentatricopeptide, putative, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19390 PPR repeat containing protein, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19400 retrotransposon protein, putative, unclassified, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19410 retrotransposon protein, putative, Ty3-gypsy subclass FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19420 retrotransposon protein, putative, Ty3-gypsy subclass FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19430 retrotransposon protein, putative, Ty3-gypsy subclass FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19440 transposon protein, putative, unclassified FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19450 retrotransposon protein, putative, unclassified, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19460 retrotransposon protein, putative, unclassified, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19470 expressed protein FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19480 peroxisome assembly protein, putative, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19490 expressed protein FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19500 ATCHX, putative, expressed FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19510 retrotransposon protein, putative, Ty3-gypsy subclass FN3438-S Chr5 11129001 11347000 0 0 Deletion 217999 LOC_Os05g19520 retrotransposon protein, putative, unclassified, expressed FN3438-S Chr5 11353001 11364000 0 0 Deletion 10999 LOC_Os05g19540 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3438-S Chr5 11370001 11383000 0 0 Deletion 12999 LOC_Os05g19540 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3438-S Chr5 11370001 11383000 0 0 Deletion 12999 LOC_Os05g19550 retrotransposon protein, putative, unclassified, expressed FN3438-S Chr5 11370001 11383000 0 0 Deletion 12999 LOC_Os05g19560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3438-S Chr5 11392001 11445000 0 0 Deletion 52999 LOC_Os05g19570 expansin precursor, putative, expressed FN3438-S Chr5 11392001 11445000 0 0 Deletion 52999 LOC_Os05g19580 expressed protein FN3438-S Chr5 11392001 11445000 0 0 Deletion 52999 LOC_Os05g19590 retrotransposon protein, putative, unclassified, expressed FN3438-S Chr5 11392001 11445000 0 0 Deletion 52999 LOC_Os05g19600 expansin precursor, putative, expressed FN3438-S Chr5 11392001 11445000 0 0 Deletion 52999 LOC_Os05g19610 retrotransposon, putative, centromere-specific, expressed FN3438-S Chr5 11392001 11445000 0 0 Deletion 52999 LOC_Os05g19620 expressed protein FN3438-S Chr5 11392001 11445000 0 0 Deletion 52999 LOC_Os05g19630 peptide chain release factor protein, putative, expressed FN3438-S Chr5 12274087 12275237 0 0 Inversion 0 LOC_Os05g20900 retrotransposon protein, putative, unclassified FN3438-S Chr5 12274098 12275245 0 0 Inversion 0 LOC_Os05g20900 retrotransposon protein, putative, unclassified FN3438-S Chr5 12565468 12565470 0 0 Deletion 2 HET FN3438-S Chr5 16662172 G-C 0 0 Single Base Substitution 0 Homo FN3438-S Chr5 16904193 16904196 0 0 Deletion 3 HET FN3438-S Chr5 3682505 T-C 0 0 Single Base Substitution 0 HET FN3438-S Chr5 5087123 5087124 0 0 Deletion 1 HET FN3438-S Chr6 11657242 11657244 0 0 Insertion 2 HET FN3438-S Chr6 17258164 C-A 0 0 Single Base Substitution 0 HET FN3438-S Chr6 28380653 28380658 0 0 Deletion 5 frameshift_variant Homo LOC_Os06g46720 retrotransposon protein, putative, unclassified, expressed FN3438-S Chr6 29147498 29147499 0 0 Deletion 1 frameshift_variant Homo LOC_Os06g48190 expressed protein FN3438-S Chr6 9929682 G-T 0 0 Single Base Substitution 0 HET FN3438-S Chr7 16016999 G-A 0 0 Single Base Substitution 0 HET FN3438-S Chr7 19605444 G-A 0 0 Single Base Substitution 0 HET FN3438-S Chr7 27541109 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g46140 transposon protein, putative, unclassified, expressed FN3438-S Chr7 3122191 T-A 0 0 Single Base Substitution 0 HET FN3438-S Chr7 4179638 4179648 0 0 Deletion 10 HET FN3438-S Chr7 5236328 5236355 0 0 Deletion 27 HET FN3438-S Chr7 7089085 C-T 0 0 Single Base Substitution 0 HET FN3438-S Chr8 10130360 Chr7 18122871 0 Translocation 0 FN3438-S Chr8 1131362 1131377 0 0 Deletion 15 Homo FN3438-S Chr8 11631622 11631623 0 0 Deletion 1 HET FN3438-S Chr8 27084104 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g42830 transposon protein, putative, unclassified, expressed FN3438-S Chr8 5337766 5337767 0 0 Deletion 1 HET FN3438-S Chr8 9703302 Chr6 18191427 0 Translocation 0 FN3438-S Chr9 11665788 G-A 0 0 Single Base Substitution 0 HET FN3438-S Chr9 18149451 18149453 0 0 Deletion 2 HET FN3438-S Chr9 18313692 18313701 0 0 Insertion 9 HET FN3438-S Chr9 1970130 G-A 0 0 Single Base Substitution 0 HET FN3438-S Chr9 253628 253629 0 0 Deletion 1 HET FN3438-S Chr9 4073377 4073381 0 0 Insertion 4 HET FN3438-S Chr9 5931126 T-A 0 0 Single Base Substitution 0 HET FN3438-S Chr9 5933389 5933390 0 0 Insertion 1 HET FN3438-S Chr9 974243 974244 0 0 Deletion 1 HET