FN3444-S Chr1 17612085 17612088 0 0 Deletion 3 Homo FN3444-S Chr1 23070308 23070310 0 0 Deletion 2 HET FN3444-S Chr11 10728139 C-T 0 0 Single Base Substitution 0 HET FN3444-S Chr11 15501745 G-A 0 0 Single Base Substitution 0 HET FN3444-S Chr11 17512066 Chr7 13570822 0 Translocation 0 FN3444-S Chr11 2124507 G-A 0 0 Single Base Substitution 0 HET FN3444-S Chr11 24747890 Chr3 27525989 0 Translocation 0 LOC_Os03g48330 retrotransposon protein, putative, unclassified, expressed FN3444-S Chr11 24747890 Chr3 27525989 0 Translocation 0 LOC_Os11g41280 retrotransposon protein, putative, unclassified, expressed FN3444-S Chr11 3551691 C-T 0 0 Single Base Substitution 0 HET FN3444-S Chr11 7592353 C-T 0 0 Single Base Substitution 0 HET FN3444-S Chr11 8029450 G-T 0 0 Single Base Substitution 0 HET FN3444-S Chr12 1637802 2302210 0 0 Inversion 0 LOC_Os12g03950 major facilitator superfamily antiporter, putative, expressed FN3444-S Chr12 5660597 Chr3 20221878 0 Translocation 0 FN3444-S Chr12 5660597 Chr3 20221878 0 Translocation 0 LOC_Os03g36520 retrotransposon, putative, centromere-specific, expressed FN3444-S Chr12 755872 755874 0 0 Deletion 2 HET FN3444-S Chr2 15300914 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g26060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3444-S Chr2 17653375 C-T 0 0 Single Base Substitution 0 Homo FN3444-S Chr2 21496892 A-C 0 0 Single Base Substitution 0 HET FN3444-S Chr2 2805722 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g05710 expressed protein FN3444-S Chr2 3394318 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g06740 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3444-S Chr3 17633791 G-A 0 0 Single Base Substitution 0 HET FN3444-S Chr3 17797486 C-A 0 0 Single Base Substitution 0 HET FN3444-S Chr3 20810676 20810677 0 0 Deletion 1 frameshift_variant HET LOC_Os03g37500 retrotransposon protein, putative, unclassified, expressed FN3444-S Chr3 3060289 3060290 0 0 Deletion 1 HET FN3444-S Chr3 34549439 T-G 0 0 Single Base Substitution 0 Homo FN3444-S Chr3 5219487 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g10250 expressed protein FN3444-S Chr4 10142493 C-T 0 0 Single Base Substitution 0 HET FN3444-S Chr4 15955804 G-A 0 0 Single Base Substitution 0 HET FN3444-S Chr4 24472790 A-C 0 0 Single Base Substitution 0 HET FN3444-S Chr4 25637027 25637028 0 0 Deletion 1 HET FN3444-S Chr4 26999911 T-C 0 0 Single Base Substitution 0 HET FN3444-S Chr4 3749196 3749199 0 0 Deletion 3 inframe_deletion HET LOC_Os04g07070 retrotransposon protein, putative, unclassified FN3444-S Chr5 10670397 G-T 0 0 Single Base Substitution 0 HET FN3444-S Chr5 24693868 G-A 0 0 Single Base Substitution 0 Homo FN3444-S Chr5 28885305 28885307 0 0 Deletion 2 HET FN3444-S Chr5 830478 830480 0 0 Deletion 2 HET FN3444-S Chr5 9803224 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g17130 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3444-S Chr6 12524160 A-T 0 0 Single Base Substitution 0 HET FN3444-S Chr6 21296281 T-C 0 0 Single Base Substitution 0 HET FN3444-S Chr6 21481233 21481234 0 0 Deletion 1 HET FN3444-S Chr6 21590272 21590274 0 0 Deletion 2 HET FN3444-S Chr7 12273726 12273729 0 0 Deletion 3 inframe_deletion HET LOC_Os07g21950 retrotransposon protein, putative, unclassified, expressed FN3444-S Chr7 1491632 1491636 0 0 Deletion 4 Homo FN3444-S Chr7 24059260 Chr3 4695485 0 Translocation 0 FN3444-S Chr7 24059260 Chr3 4695485 0 Translocation 0 LOC_Os03g09045 retrotransposon protein, putative, unclassified, expressed FN3444-S Chr7 25127541 Chr2 21836310 0 Translocation 0 FN3444-S Chr7 27652007 A-T 0 0 Single Base Substitution 0 HET FN3444-S Chr7 28604181 28604182 0 0 Insertion 1 HET FN3444-S Chr7 645671 A-G 0 0 Single Base Substitution 0 HET FN3444-S Chr8 1204457 A-G 0 0 Single Base Substitution 0 HET FN3444-S Chr8 15183100 16045324 0 0 Inversion 0 FN3444-S Chr8 24594507 C-T 0 0 Single Base Substitution 0 HET FN3444-S Chr8 25030998 T-G 0 0 Single Base Substitution 0 HET FN3444-S Chr8 27701256 C-T 0 0 Single Base Substitution 0 HET FN3444-S Chr8 3177185 G-A 0 0 Single Base Substitution 0 HET FN3444-S Chr8 6391343 G-A 0 0 Single Base Substitution 0 HET FN3444-S Chr8 8556421 T-A 0 0 Single Base Substitution 0 HET FN3444-S Chr8 9744489 9744490 0 0 Deletion 1 HET FN3444-S Chr8 9944781 9944782 0 0 Deletion 1 frameshift_variant HET LOC_Os08g16290 retrotransposon protein, putative, unclassified, expressed FN3444-S Chr9 12792703 G-A 0 0 Single Base Substitution 0 HET FN3444-S Chr9 13261714 A-C 0 0 Single Base Substitution 0 HET FN3444-S Chr9 16905094 A-T 0 0 Single Base Substitution 0 Homo FN3444-S Chr9 19804797 19804799 0 0 Insertion 2 HET FN3444-S Chr9 22836603 22836604 0 0 Deletion 1 frameshift_variant HET LOC_Os09g39830 retrotransposon protein, putative, unclassified, expressed FN3444-S Chr9 6193786 C-T 0 0 Single Base Substitution 0 Homo