FN3449-S Chr1 17833819 G-T 0 0 Single Base Substitution 0 Homo FN3449-S Chr1 31423682 31423684 0 0 Insertion 2 HET FN3449-S Chr1 34069117 C-T 0 0 Single Base Substitution 0 HET FN3449-S Chr1 35500870 A-G 0 0 Single Base Substitution 0 HET FN3449-S Chr1 5943189 5943204 0 0 Insertion 15 HET FN3449-S Chr10 10944274 Chr6 10286140 0 Translocation 0 LOC_Os06g17720 expressed protein FN3449-S Chr10 10944274 Chr6 10286140 0 Translocation 0 LOC_Os10g21380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3449-S Chr10 1353092 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g03200 retrotransposon protein, putative, unclassified FN3449-S Chr10 21868379 T-A 0 0 Single Base Substitution 0 Homo FN3449-S Chr10 22556093 T-C 0 0 Single Base Substitution 0 Homo FN3449-S Chr11 11477660 G-A 0 0 Single Base Substitution 0 HET FN3449-S Chr11 11696800 A-C 0 0 Single Base Substitution 0 HET FN3449-S Chr11 17995827 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g30930 expressed protein FN3449-S Chr11 18053607 18053630 0 0 Deletion 23 HET FN3449-S Chr11 23768054 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g39870 retrotransposon protein, putative, unclassified, expressed FN3449-S Chr11 26664890 26664900 0 0 Deletion 10 Homo FN3449-S Chr11 5908603 C-T 0 0 Single Base Substitution 0 HET FN3449-S Chr12 10271759 G-T 0 0 Single Base Substitution 0 Homo FN3449-S Chr12 10527597 G-A 0 0 Single Base Substitution 0 Homo FN3449-S Chr12 11832535 Chr3 15245514 0 Translocation 0 LOC_Os03g26704 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3449-S Chr12 11832535 Chr3 15245514 0 Translocation 0 LOC_Os12g20270 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3449-S Chr12 23393238 23393245 0 0 Deletion 7 Homo FN3449-S Chr12 4222971 G-A 0 0 Single Base Substitution 0 HET FN3449-S Chr12 6664649 Chr6 21870112 0 Translocation 0 FN3449-S Chr12 6664649 Chr6 21870112 0 Translocation 0 LOC_Os06g37050 transposon protein, putative, unclassified, expressed FN3449-S Chr12 6664911 Chr2 3009121 0 Translocation 0 FN3449-S Chr2 28580028 T-C 0 0 Single Base Substitution 0 HET FN3449-S Chr2 29647128 29647131 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os02g48410 retrotransposon protein, putative, unclassified, expressed FN3449-S Chr2 32764606 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g53550 retrotransposon protein, putative, unclassified, expressed FN3449-S Chr2 34284231 34284235 0 0 Deletion 4 HET FN3449-S Chr2 5104932 5104952 0 0 Deletion 20 HET FN3449-S Chr2 7262879 7262884 0 0 Deletion 5 Homo FN3449-S Chr3 34841609 34841610 0 0 Deletion 1 frameshift_variant HET LOC_Os03g61390 retrotransposon protein, putative, unclassified, expressed FN3449-S Chr3 8934073 G-A 0 0 Single Base Substitution 0 HET FN3449-S Chr4 10726466 Chr3 21207034 0 Translocation 0 FN3449-S Chr4 10726466 Chr3 21207034 0 Translocation 0 LOC_Os03g38190 retrotransposon, putative, centromere-specific FN3449-S Chr4 17139437 17139446 0 0 Deletion 9 inframe_deletion Homo LOC_Os04g28910 retrotransposon protein, putative, unclassified, expressed FN3449-S Chr4 29028581 29028601 0 0 Deletion 20 Homo FN3449-S Chr4 35074674 35074677 0 0 Deletion 3 Homo FN3449-S Chr5 11965739 11965743 0 0 Insertion 4 HET FN3449-S Chr5 19884892 G-A 0 0 Single Base Substitution 0 Homo FN3449-S Chr5 474719 474723 0 0 Deletion 4 frameshift_variant HET LOC_Os05g01780 STE_PAK_Ste20++TranslationKinase_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed FN3449-S Chr5 6565867 C-T 0 0 Single Base Substitution 0 HET FN3449-S Chr6 15310439 T-A 0 0 Single Base Substitution 0 HET FN3449-S Chr6 16196322 A-T 0 0 Single Base Substitution 0 HET FN3449-S Chr6 24522675 24522682 0 0 Deletion 7 Homo FN3449-S Chr6 25000292 25000294 0 0 Insertion 2 HET FN3449-S Chr6 29851165 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g49260 OsWAK65 - OsWAK receptor-like protein kinase, expressed FN3449-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g16950 expressed protein FN3449-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g16960 O-methyltransferase, putative, expressed FN3449-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g16970 hypothetical protein FN3449-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g16980 DNA topoisomerase I family protein, expressed FN3449-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g16990 expressed protein FN3449-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g17000 BURP domain containing protein, expressed FN3449-S Chr6 9820001 9876000 0 0 Deletion 55999 LOC_Os06g17020 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17040 retrotransposon protein, putative, unclassified, expressed FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17050 expressed protein FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17060 retrotransposon protein, putative, Ty1-copia subclass FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17070 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17080 retrotransposon protein, putative, unclassified, expressed FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17090 UDP-glycosyltransferase, putative, expressed FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17100 retrotransposon protein, putative, unclassified, expressed FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17110 glycosyltransferase, putative, expressed FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17120 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17130 expressed protein FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17140 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17150 retrotransposon protein, putative, unclassified, expressed FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17160 transposon protein, putative, unclassified, expressed FN3449-S Chr6 9883001 9956000 0 0 Deletion 72999 LOC_Os06g17170 retrotransposon protein, putative, unclassified FN3449-S Chr7 12714425 12714432 0 0 Deletion 7 Homo FN3449-S Chr7 22272403 22272408 0 0 Deletion 5 frameshift_variant Homo LOC_Os07g37180 ABC1 family domain containing protein, putative, expressed FN3449-S Chr7 23128165 A-T 0 0 Single Base Substitution 0 HET FN3449-S Chr7 9900989 9900996 0 0 Deletion 7 HET FN3449-S Chr8 13449067 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g22310 retrotransposon protein, putative, unclassified, expressed FN3449-S Chr8 52117 52149 0 0 Deletion 32 HET FN3449-S Chr9 14756658 G-A 0 0 Single Base Substitution 0 Homo FN3449-S Chr9 22431253 22431255 0 0 Insertion 2 HET FN3449-S Chr9 273161 A-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g01340 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3449-S Chr9 5495450 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3449-S Chr9 6078995 6079003 0 0 Deletion 8 Homo