FN3452-S Chr1 11083224 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g19529 pentatricopeptide, putative, expressed FN3452-S Chr1 18681749 G-T 0 0 Single Base Substitution 0 HET FN3452-S Chr1 20070174 20070178 0 0 Deletion 4 frameshift_variant HET LOC_Os01g36250 transposon protein, putative, unclassified, expressed FN3452-S Chr1 20474722 A-C 0 0 Single Base Substitution 0 HET FN3452-S Chr1 28858614 C-A 0 0 Single Base Substitution 0 HET FN3452-S Chr1 30944337 A-G 0 0 Single Base Substitution 0 HET FN3452-S Chr1 4187174 4187175 0 0 Deletion 1 HET FN3452-S Chr1 7901937 7901942 0 0 Deletion 5 HET FN3452-S Chr10 16806685 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os10g31990 retrotransposon protein, putative, unclassified, expressed FN3452-S Chr10 20128457 G-A 0 0 Single Base Substitution 0 Homo FN3452-S Chr10 2239005 Chr1 2819544 0 Translocation 0 FN3452-S Chr10 23061198 Chr3 23376674 0 Translocation 0 FN3452-S Chr10 23061198 Chr3 23376674 0 Translocation 0 LOC_Os03g42050 exportin-7-A, putative, expressed FN3452-S Chr10 6971882 C-T 0 0 Single Base Substitution 0 HET FN3452-S Chr10 8964981 T-C 0 0 Single Base Substitution 0 HET FN3452-S Chr11 10390209 G-T 0 0 Single Base Substitution 0 Homo FN3452-S Chr11 13096842 13275714 0 0 Inversion 0 FN3452-S Chr11 13096842 13275714 0 0 Inversion 0 LOC_Os11g23070 retrotransposon protein, putative, unclassified, expressed FN3452-S Chr11 13096855 13275716 0 0 Inversion 0 FN3452-S Chr11 13096855 13275716 0 0 Inversion 0 LOC_Os11g23070 retrotransposon protein, putative, unclassified, expressed FN3452-S Chr11 13393820 A-G 0 0 Single Base Substitution 0 Homo FN3452-S Chr11 14136896 14136913 0 0 Deletion 17 HET FN3452-S Chr11 15058508 G-A 0 0 Single Base Substitution 0 Homo FN3452-S Chr11 15769852 G-T 0 0 Single Base Substitution 0 Homo FN3452-S Chr11 15769853 G-T 0 0 Single Base Substitution 0 Homo FN3452-S Chr11 16345123 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g28400 retrotransposon protein, putative, unclassified, expressed FN3452-S Chr11 20879985 20879986 0 0 Insertion 1 HET FN3452-S Chr11 20951419 20951421 0 0 Deletion 2 HET FN3452-S Chr11 2633051 Chr2 9238120 0 Translocation 0 LOC_Os11g05740 B3 DNA binding domain containing protein, expressed FN3452-S Chr11 28164770 C-T 0 0 Single Base Substitution 0 HET FN3452-S Chr11 3304813 A-G 0 0 Single Base Substitution 0 HET FN3452-S Chr11 6425947 C-G 0 0 Single Base Substitution 0 HET FN3452-S Chr12 12237346 C-T 0 0 Single Base Substitution 0 HET FN3452-S Chr12 143568 C-T 0 0 Single Base Substitution 0 HET FN3452-S Chr12 16737496 16737520 0 0 Deletion 24 Homo FN3452-S Chr12 19030375 Chr11 28433553 0 Translocation 0 FN3452-S Chr12 19030375 Chr11 28433553 0 Translocation 0 LOC_Os11g47290 receptor kinase, putative, expressed FN3452-S Chr12 21435388 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g35280 retrotransposon protein, putative, unclassified, expressed FN3452-S Chr12 27053080 Chr4 11544365 0 Translocation 0 LOC_Os12g43590 FAD dependent oxidoreductase domain containing protein, expressed FN3452-S Chr12 27080746 Chr6 8332724 0 Translocation 0 FN3452-S Chr12 7817698 G-A 0 0 Single Base Substitution 0 HET FN3452-S Chr12 8840168 Chr4 15519175 0 Translocation 0 FN3452-S Chr2 10148522 G-A 0 0 Single Base Substitution 0 HET FN3452-S Chr2 10577018 C-T 0 0 Single Base Substitution 0 HET FN3452-S Chr2 11331998 C-T 0 0 Single Base Substitution 0 HET FN3452-S Chr2 11548163 Chr1 22081733 0 Translocation 0 LOC_Os02g19730 retrotransposon protein, putative, unclassified, expressed FN3452-S Chr2 17041153 G-A 0 0 Single Base Substitution 0 HET FN3452-S Chr2 23086806 A-G 0 0 Single Base Substitution 0 HET FN3452-S Chr2 23290491 23290492 0 0 Insertion 1 HET FN3452-S Chr2 31894012 G-A 0 0 Single Base Substitution 0 HET FN3452-S Chr2 9176001 9224000 0 0 Deletion 47999 LOC_Os02g16130 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3452-S Chr2 9176001 9224000 0 0 Deletion 47999 LOC_Os02g16140 transposon protein, putative, unclassified, expressed FN3452-S Chr2 9176001 9224000 0 0 Deletion 47999 LOC_Os02g16150 retrotransposon protein, putative, Ty3-gypsy subclass FN3452-S Chr2 9176001 9224000 0 0 Deletion 47999 LOC_Os02g16160 expressed protein FN3452-S Chr2 9176001 9224000 0 0 Deletion 47999 LOC_Os02g16180 retrotransposon protein, putative, Ty3-gypsy subclass FN3452-S Chr2 9176001 9224000 0 0 Deletion 47999 LOC_Os02g16190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3452-S Chr2 9176001 9224000 0 0 Deletion 47999 LOC_Os02g16200 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3452-S Chr2 9176001 9224000 0 0 Deletion 47999 LOC_Os02g16210 transposon protein, putative, unclassified, expressed FN3452-S Chr2 9176001 9224000 0 0 Deletion 47999 LOC_Os02g16220 expressed protein FN3452-S Chr2 9176001 9224000 0 0 Deletion 47999 LOC_Os02g16230 expressed protein FN3452-S Chr2 9227001 9238000 0 0 Deletion 10999 LOC_Os02g16240 transposon protein, putative, unclassified, expressed FN3452-S Chr3 16078768 16078770 0 0 Insertion 2 HET FN3452-S Chr3 17471752 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g30640 expressed protein FN3452-S Chr3 19270274 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g33690 retrotransposon protein, putative, unclassified, expressed FN3452-S Chr3 19468483 T-C 0 0 Single Base Substitution 0 HET FN3452-S Chr3 20612646 20612647 0 0 Deletion 1 HET FN3452-S Chr3 27191632 G-A 0 0 Single Base Substitution 0 HET FN3452-S Chr3 32430134 G-A 0 0 Single Base Substitution 0 HET FN3452-S Chr3 5150048 C-G 0 0 Single Base Substitution 0 HET FN3452-S Chr4 10867929 T-C 0 0 Single Base Substitution 0 HET FN3452-S Chr4 11105549 T-C 0 0 Single Base Substitution 0 HET FN3452-S Chr4 13182172 A-T 0 0 Single Base Substitution 0 HET FN3452-S Chr4 16213539 16450485 0 0 Inversion 0 FN3452-S Chr4 16213539 16450485 0 0 Inversion 0 LOC_Os04g27850 oxidoreductase, putative, expressed FN3452-S Chr4 16213544 16215054 0 0 Inversion 0 FN3452-S Chr4 16213544 16215054 0 0 Inversion 0 LOC_Os04g27430 terpene synthase, putative, expressed FN3452-S Chr4 18331966 T-C 0 0 Single Base Substitution 0 HET FN3452-S Chr4 2821675 2821680 0 0 Deletion 5 frameshift_variant HET LOC_Os04g05570 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3452-S Chr4 2896709 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g05670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3452-S Chr4 29663511 C-G 0 0 Single Base Substitution 0 HET FN3452-S Chr5 10576711 G-A 0 0 Single Base Substitution 0 HET FN3452-S Chr5 11172186 11172188 0 0 Insertion 2 frameshift_variant HET LOC_Os05g19240 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3452-S Chr5 12214445 12214446 0 0 Insertion 1 HET FN3452-S Chr5 12429617 C-T 0 0 Single Base Substitution 0 Homo FN3452-S Chr5 17273640 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g29850 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3452-S Chr5 19111806 19111812 0 0 Deletion 6 HET FN3452-S Chr5 22175969 A-G 0 0 Single Base Substitution 0 Homo FN3452-S Chr5 29187406 A-G 0 0 Single Base Substitution 0 HET FN3452-S Chr5 4743631 4743638 0 0 Deletion 7 HET FN3452-S Chr5 6930885 A-G 0 0 Single Base Substitution 0 Homo FN3452-S Chr6 10144060 Chr3 22322171 0 Translocation 0 FN3452-S Chr6 12701063 G-A 0 0 Single Base Substitution 0 HET FN3452-S Chr6 16047129 16047198 0 0 Insertion 69 HET FN3452-S Chr6 26049988 G-A 0 0 Single Base Substitution 0 Homo FN3452-S Chr6 8786279 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g15480 transcription factor, putative, expressed FN3452-S Chr7 10466756 T-C 0 0 Single Base Substitution 0 HET FN3452-S Chr7 1160925 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g03060 expressed protein FN3452-S Chr7 1170776 1170777 0 0 Deletion 1 Homo FN3452-S Chr7 12601303 C-T 0 0 Single Base Substitution 0 Homo FN3452-S Chr7 23880730 23880733 0 0 Insertion 3 HET FN3452-S Chr8 12594197 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g21060 retrotransposon protein, putative, unclassified, expressed FN3452-S Chr8 14086576 14086662 0 0 Deletion 86 HET FN3452-S Chr8 17182927 G-A 0 0 Single Base Substitution 0 HET FN3452-S Chr8 2404154 G-A 0 0 Single Base Substitution 0 HET FN3452-S Chr8 26555896 T-C 0 0 Single Base Substitution 0 HET FN3452-S Chr8 4159028 4159029 0 0 Insertion 1 HET FN3452-S Chr8 5900768 G-T 0 0 Single Base Substitution 0 HET FN3452-S Chr8 6586437 6892200 0 0 Inversion 0 FN3452-S Chr8 6586437 6892200 0 0 Inversion 0 LOC_Os08g11760 expressed protein FN3452-S Chr8 6985840 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g11920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3452-S Chr8 7873025 C-T 0 0 Single Base Substitution 0 HET FN3452-S Chr9 13387366 A-G 0 0 Single Base Substitution 0 HET FN3452-S Chr9 1499391 A-T 0 0 Single Base Substitution 0 HET FN3452-S Chr9 282426 G-C 0 0 Single Base Substitution 0 HET FN3452-S Chr9 5180702 Chr4 5414993 0 Translocation 0 FN3452-S Chr9 5274700 A-G 0 0 Single Base Substitution 0 Homo FN3452-S Chr9 5933109 5933110 0 0 Deletion 1 HET FN3452-S Chr9 929161 A-T 0 0 Single Base Substitution 0 Homo