FN3487-S Chr1 19671802 G-A 0 0 Single Base Substitution 0 HET FN3487-S Chr1 35222378 35222386 0 0 Deletion 8 Homo FN3487-S Chr1 36382996 36383000 0 0 Insertion 4 HET FN3487-S Chr1 37573876 T-C 0 0 Single Base Substitution 0 Homo FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26760 transposon protein, putative, CACTA, En/Spm sub-class FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26770 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26780 expressed protein FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26800 hypothetical protein FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26810 retrotransposon protein, putative, LINE subclass, expressed FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26820 expressed protein FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26830 retrotransposon protein, putative, unclassified, expressed FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26840 transposon protein, putative, unclassified FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26850 expressed protein FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26859 expressed protein FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26870 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3487-S Chr10 13996001 14137000 0 0 Deletion 140999 LOC_Os10g26880 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3487-S Chr10 17065245 17065260 0 0 Deletion 15 disruptive_inframe_deletion Homo LOC_Os10g32570 tRNA synthetase class I family protein, putative, expressed FN3487-S Chr10 2254065 A-T 0 0 Single Base Substitution 0 Homo FN3487-S Chr10 4233995 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g07622 retrotransposon protein, putative, unclassified, expressed FN3487-S Chr10 5282663 T-A 0 0 Single Base Substitution 0 HET FN3487-S Chr11 21550560 21550564 0 0 Insertion 4 HET FN3487-S Chr11 25663152 C-T 0 0 Single Base Substitution 0 HET FN3487-S Chr11 4404959 4477733 0 0 Inversion 0 FN3487-S Chr11 4404959 4477733 0 0 Inversion 0 LOC_Os11g08470 DnaK family protein, putative, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08470 DnaK family protein, putative, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08480 expressed protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08490 expressed protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08500 expressed protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08510 retrotransposon protein, putative, Ty1-copia subclass FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08520 expressed protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08536 expressed protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08542 retrotransposon protein, putative, unclassified, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08550 retrotransposon protein, putative, unclassified, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08569 cycloartenol synthase, putative, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08590 expressed protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08610 retrotransposon protein, putative, unclassified, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08620 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08630 retrotransposon protein, putative, Ty3-gypsy subclass FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08640 retrotransposon protein, putative, unclassified, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08650 transposon protein, putative, CACTA, En/Spm sub-class FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08660 TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08670 NAD kinase, putative, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08680 expressed protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08707 expressed protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08720 retrotransposon, putative, centromere-specific, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08729 retrotransposon, putative, centromere-specific FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08740 expressed protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08750 pectinesterase, putative, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08760 pectinesterase family protein, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08770 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08780 hypothetical protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08790 transposon protein, putative, CACTA, En/Spm sub-class FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08800 expressed protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08810 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08820 expressed protein FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08830 kelch domain containing protein, putative, expressed FN3487-S Chr11 4474001 4687000 0 0 Deletion 212999 LOC_Os11g08840 expressed protein FN3487-S Chr11 577383 592895 0 0 Inversion 0 FN3487-S Chr11 577383 592895 0 0 Inversion 0 LOC_Os11g02150 saposin-like type B, region 1 family protein, putative, expressed FN3487-S Chr11 577447 593267 0 0 Inversion 0 FN3487-S Chr11 577447 593267 0 0 Inversion 0 LOC_Os11g02150 saposin-like type B, region 1 family protein, putative, expressed FN3487-S Chr12 12459536 12459537 0 0 Deletion 1 Homo FN3487-S Chr12 16302243 C-T 0 0 Single Base Substitution 0 Homo FN3487-S Chr12 16502169 16502176 0 0 Deletion 7 HET FN3487-S Chr12 22662435 22662436 0 0 Deletion 1 frameshift_variant HET LOC_Os12g36950 CTP synthase, putative, expressed FN3487-S Chr12 24197317 G-A 0 0 Single Base Substitution 0 HET FN3487-S Chr12 25370427 Chr8 15270537 0 Translocation 0 FN3487-S Chr2 18041544 18041558 0 0 Deletion 14 Homo FN3487-S Chr2 33238494 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g54210 retrotransposon protein, putative, unclassified, expressed FN3487-S Chr2 7130071 7130073 0 0 Deletion 2 HET FN3487-S Chr3 18553565 C-A 0 0 Single Base Substitution 0 HET FN3487-S Chr3 26484048 T-G 0 0 Single Base Substitution 0 HET FN3487-S Chr3 30573871 A-T 0 0 Single Base Substitution 0 HET FN3487-S Chr3 34757200 G-A 0 0 Single Base Substitution 0 HET FN3487-S Chr4 2067626 2067627 0 0 Insertion 1 HET FN3487-S Chr4 22233320 22233328 0 0 Deletion 8 Homo FN3487-S Chr4 29122517 29122522 0 0 Deletion 5 frameshift_variant HET LOC_Os04g48830 DUF623 domain containing protein, expressed FN3487-S Chr4 8122680 G-A 0 0 Single Base Substitution 0 Homo FN3487-S Chr5 10567196 G-C 0 0 Single Base Substitution 0 HET FN3487-S Chr5 23416921 23416922 0 0 Deletion 1 HET FN3487-S Chr5 27836551 C-T 0 0 Single Base Substitution 0 Homo FN3487-S Chr5 27836553 C-T 0 0 Single Base Substitution 0 Homo FN3487-S Chr5 7263194 7263195 0 0 Deletion 1 HET FN3487-S Chr6 17925805 A-T 0 0 Single Base Substitution 0 HET FN3487-S Chr6 6217921 6217928 0 0 Deletion 7 HET FN3487-S Chr7 10341129 10341139 0 0 Deletion 10 HET FN3487-S Chr7 16405781 G-A 0 0 Single Base Substitution 0 HET FN3487-S Chr7 26057646 Chr1 10500976 0 Translocation 0 FN3487-S Chr7 27779871 27779899 0 0 Deletion 28 HET FN3487-S Chr7 27894308 27894309 0 0 Deletion 1 Homo FN3487-S Chr7 27946528 C-T 0 0 Single Base Substitution 0 Homo FN3487-S Chr7 27946529 A-T 0 0 Single Base Substitution 0 Homo FN3487-S Chr8 10307829 10307831 0 0 Deletion 2 HET FN3487-S Chr8 12797772 G-A 0 0 Single Base Substitution 0 HET FN3487-S Chr8 1870609 1870610 0 0 Insertion 1 frameshift_variant Homo LOC_Os08g03930 retrotransposon protein, putative, unclassified, expressed FN3487-S Chr8 25226976 G-C 0 0 Single Base Substitution 0 Homo FN3487-S Chr8 5804276 G-A 0 0 Single Base Substitution 0 HET FN3487-S Chr8 5867293 G-C 0 0 Single Base Substitution 0 HET FN3487-S Chr9 10154532 10154549 0 0 Deletion 17 frameshift_variant HET LOC_Os09g16540 protein kinase, putative, expressed FN3487-S Chr9 12827624 12827627 0 0 Insertion 3 Homo FN3487-S Chr9 21398825 A-G 0 0 Single Base Substitution 0 HET FN3487-S Chr9 9740365 G-A 0 0 Single Base Substitution 0 HET