FN3492-S Chr1 14160013 G-T 0 0 Single Base Substitution 0 Homo FN3492-S Chr1 34936577 C-G 0 0 Single Base Substitution 0 HET FN3492-S Chr1 37213363 37213368 0 0 Deletion 5 frameshift_variant HET LOC_Os01g64070 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3492-S Chr1 42555946 A-T 0 0 Single Base Substitution 0 HET FN3492-S Chr10 15296189 G-A 0 0 Single Base Substitution 0 HET FN3492-S Chr10 22622503 22622505 0 0 Insertion 2 HET FN3492-S Chr10 9689829 A-T 0 0 Single Base Substitution 0 HET FN3492-S Chr11 236114 C-T 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os11g01380 clathrin heavy chain, putative, expressed FN3492-S Chr11 6176085 6176092 0 0 Deletion 7 HET FN3492-S Chr12 1454898 1454902 0 0 Deletion 4 frameshift_variant HET LOC_Os12g03630 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed FN3492-S Chr12 16737762 G-A 0 0 Single Base Substitution 0 HET FN3492-S Chr12 19634283 19634289 0 0 Deletion 6 disruptive_inframe_deletion HET LOC_Os12g32530 expressed protein FN3492-S Chr12 20711488 20711490 0 0 Insertion 2 HET FN3492-S Chr12 26237106 26237110 0 0 Deletion 4 Homo FN3492-S Chr12 323474 323481 0 0 Deletion 7 frameshift_variant HET LOC_Os12g01530 ferritin-1, chloroplast precursor, putative, expressed FN3492-S Chr12 5268794 5268799 0 0 Deletion 5 frameshift_variant HET LOC_Os12g09970 retrotransposon protein, putative, unclassified FN3492-S Chr2 10774414 C-A 0 0 Single Base Substitution 0 HET FN3492-S Chr2 13226640 C-T 0 0 Single Base Substitution 0 HET FN3492-S Chr2 16659498 Chr1 23143179 0 Translocation 0 FN3492-S Chr2 26324983 A-G 0 0 Single Base Substitution 0 HET FN3492-S Chr2 31798638 C-A 0 0 Single Base Substitution 0 HET FN3492-S Chr2 31798640 A-G 0 0 Single Base Substitution 0 HET FN3492-S Chr2 34028314 34028316 0 0 Deletion 2 HET FN3492-S Chr2 4831052 T-A 0 0 Single Base Substitution 0 Homo FN3492-S Chr2 5480548 5480560 0 0 Deletion 12 splice_donor_variant&inframe_deletion&splice_region_variant&intron_variant Homo LOC_Os02g10430 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed FN3492-S Chr2 8701545 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g15520 transposon protein, putative, unclassified, expressed FN3492-S Chr3 13504449 G-T 0 0 Single Base Substitution 0 Homo FN3492-S Chr3 17466896 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g30620 expressed protein FN3492-S Chr3 22965372 Chr2 474247 0 Translocation 0 LOC_Os03g41300 expressed protein FN3492-S Chr3 23863612 23863613 0 0 Deletion 1 HET FN3492-S Chr3 5521162 5521174 0 0 Deletion 12 HET FN3492-S Chr3 6623522 G-A 0 0 Single Base Substitution 0 HET FN3492-S Chr3 9927551 C-G 0 0 Single Base Substitution 0 HET FN3492-S Chr4 14632528 15191034 0 0 Inversion 0 FN3492-S Chr4 17436984 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g29350 retrotransposon protein, putative, unclassified, expressed FN3492-S Chr4 23246001 23262000 0 0 Deletion 15999 FN3492-S Chr4 23293863 23293868 0 0 Deletion 5 Homo FN3492-S Chr4 3396834 T-C 0 0 Single Base Substitution 0 HET FN3492-S Chr4 7127616 7127617 0 0 Deletion 1 HET FN3492-S Chr4 8557904 8557917 0 0 Deletion 13 HET FN3492-S Chr4 8614586 8614593 0 0 Deletion 7 frameshift_variant Homo LOC_Os04g15880 expressed protein FN3492-S Chr5 13172182 13172198 0 0 Deletion 16 Homo FN3492-S Chr5 26823923 G-A 0 0 Single Base Substitution 0 HET FN3492-S Chr5 29066886 G-A 0 0 Single Base Substitution 0 HET FN3492-S Chr5 7968093 7968103 0 0 Deletion 10 frameshift_variant Homo LOC_Os05g14210 expressed protein FN3492-S Chr6 14215155 14215156 0 0 Deletion 1 HET FN3492-S Chr6 20775311 20775312 0 0 Deletion 1 HET FN3492-S Chr6 2623447 C-T 0 0 Single Base Substitution 0 HET FN3492-S Chr7 1229160 1229216 0 0 Insertion 56 HET FN3492-S Chr7 12558990 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g22380 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3492-S Chr7 1599854 A-T 0 0 Single Base Substitution 0 HET FN3492-S Chr7 28706966 T-A 0 0 Single Base Substitution 0 Homo FN3492-S Chr7 3277872 3277875 0 0 Deletion 3 HET FN3492-S Chr8 10197079 C-T 0 0 Single Base Substitution 0 Homo FN3492-S Chr8 15512249 A-G 0 0 Single Base Substitution 0 Homo FN3492-S Chr8 22132865 C-A 0 0 Single Base Substitution 0 Homo FN3492-S Chr8 23987667 A-G 0 0 Single Base Substitution 0 HET FN3492-S Chr8 24522943 G-A 0 0 Single Base Substitution 0 HET FN3492-S Chr9 13244488 G-T 0 0 Single Base Substitution 0 Homo FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g31980 DC1 domain-containing protein, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g31990 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32000 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32010 ternary complex factor MIP1, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32020 ubiquitin fusion degradation protein, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32025 uroporphyrinogen-III synthase, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32030 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32040 no apical meristem protein, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32050 chaperone protein dnaJ 10, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32060 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32070 retrotransposon, putative, centromere-specific FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32080 CHIT13 - Chitinase family protein precursor, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32090 methyl-binding domain protein MBD, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32095 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32100 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32120 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32130 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32140 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32150 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32160 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32169 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32180 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32190 tRNA-splicing endonuclease positive effector-related, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32200 mitochondrial carrier protein, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32210 pumilio-family RNA binding repeat containing protein, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32220 pob, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32230 vignain precursor, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32240 OsFBX332 - F-box domain containing protein, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32250 DNA repair ATPase-related, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32260 no apical meristem protein, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32270 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32274 30S ribosomal protein S16, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32280 thaumatin, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32290 FAD dependent oxidoreductase domain containing protein, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32300 KH domain-containing protein, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32310 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32320 growth regulator related protein, putative, expressed FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32330 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32340 expressed protein FN3492-S Chr9 19079001 19326000 0 0 Deletion 246999 LOC_Os09g32350 expressed protein FN3492-S Chr9 8330241 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g14070 retrotransposon protein, putative, Ty1-copia subclass