FN3496-S Chr1 12141946 A-T 0 0 Single Base Substitution 0 Homo FN3496-S Chr1 13247001 13261000 0 0 Deletion 13999 LOC_Os01g23590 suppressor of Mek, putative, expressed FN3496-S Chr1 14548343 C-T 0 0 Single Base Substitution 0 Homo FN3496-S Chr1 16674060 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g29760 retrotransposon protein, putative, unclassified, expressed FN3496-S Chr1 17844293 17844841 0 0 Inversion 0 FN3496-S Chr1 21442377 G-A 0 0 Single Base Substitution 0 Homo FN3496-S Chr1 2238144 2238152 0 0 Deletion 8 HET FN3496-S Chr1 24665422 A-C 0 0 Single Base Substitution 0 HET FN3496-S Chr1 29653001 29670000 0 0 Deletion 16999 LOC_Os01g51630 XIE, putative, expressed FN3496-S Chr1 29653001 29670000 0 0 Deletion 16999 LOC_Os01g51632 myosin XI, putative, expressed FN3496-S Chr1 29653001 29670000 0 0 Deletion 16999 LOC_Os01g51634 myosin-2 heavy chain, non muscle, putative, expressed FN3496-S Chr1 29914835 T-C 0 0 Single Base Substitution 0 HET FN3496-S Chr1 30939383 A-G 0 0 Single Base Substitution 0 HET FN3496-S Chr1 31383700 A-C 0 0 Single Base Substitution 0 HET FN3496-S Chr1 9498001 9511000 0 0 Deletion 12999 LOC_Os01g16730 ulp1 protease family, C-terminal catalytic domain containing protein, expressed FN3496-S Chr1 9498001 9511000 0 0 Deletion 12999 LOC_Os01g16740 transposon protein, putative, unclassified, expressed FN3496-S Chr10 11456350 A-T 0 0 Single Base Substitution 0 Homo FN3496-S Chr10 21580107 21580108 0 0 Deletion 1 frameshift_variant HET LOC_Os10g40260 expressed protein FN3496-S Chr10 22337001 22366000 0 0 Deletion 28999 LOC_Os10g41560 expressed protein FN3496-S Chr10 2890376 Chr5 27063268 0 Translocation 0 FN3496-S Chr10 2890383 Chr5 27059590 0 Translocation 0 FN3496-S Chr10 2890383 Chr5 27059590 0 Translocation 0 LOC_Os05g46740 regulator of chromosome condensation, putative, expressed FN3496-S Chr11 5278830 T-A 0 0 Single Base Substitution 0 Homo FN3496-S Chr12 19754966 19808554 0 0 Inversion 0 LOC_Os12g32710 NB-ARC domain containing protein, expressed FN3496-S Chr12 19754966 19808554 0 0 Inversion 0 LOC_Os12g32790 disease resistance RPP13-like protein 1, putative, expressed FN3496-S Chr12 25424253 A-G 0 0 Single Base Substitution 0 Homo FN3496-S Chr2 13138443 C-A 0 0 Single Base Substitution 0 Homo FN3496-S Chr2 13375907 C-G 0 0 Single Base Substitution 0 SPLICE_SITE_ACCEPTOR Homo LOC_Os02g22390 retrotransposon protein, putative, unclassified, expressed FN3496-S Chr2 13576936 G-A 0 0 Single Base Substitution 0 Homo FN3496-S Chr2 15062019 15062023 0 0 Deletion 4 frameshift_variant Homo LOC_Os02g25720 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3496-S Chr2 20209049 G-A 0 0 Single Base Substitution 0 HET FN3496-S Chr2 20697209 20697211 0 0 Deletion 2 HET FN3496-S Chr2 24920987 C-T 0 0 Single Base Substitution 0 HET FN3496-S Chr2 28907047 G-A 0 0 Single Base Substitution 0 Homo FN3496-S Chr2 3253481 Chr1 11737191 0 Translocation 0 FN3496-S Chr2 999902 G-A 0 0 Single Base Substitution 0 HET FN3496-S Chr3 19995096 A-G 0 0 Single Base Substitution 0 HET FN3496-S Chr3 22313001 22321000 0 0 Deletion 7999 LOC_Os03g40160 transposon protein, putative, unclassified, expressed FN3496-S Chr3 28352372 C-T 0 0 Single Base Substitution 0 Homo FN3496-S Chr3 3312467 G-A 0 0 Single Base Substitution 0 HET FN3496-S Chr3 3337300 3337301 0 0 Deletion 1 HET FN3496-S Chr3 7339562 7339565 0 0 Deletion 3 Homo FN3496-S Chr4 16081630 16081633 0 0 Insertion 3 disruptive_inframe_insertion HET LOC_Os04g27210 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3496-S Chr4 23248001 23262000 0 0 Deletion 13999 FN3496-S Chr4 26408001 26417000 0 0 Deletion 8999 LOC_Os04g44630 transposon protein, putative, unclassified, expressed FN3496-S Chr4 26408001 26417000 0 0 Deletion 8999 LOC_Os04g44640 ulp1 protease family, C-terminal catalytic domain containing protein, expressed FN3496-S Chr4 5548338 5548339 0 0 Deletion 1 frameshift_variant HET LOC_Os04g10270 retrotransposon protein, putative, unclassified, expressed FN3496-S Chr4 7785068 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g13930 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3496-S Chr5 1204001 1223000 0 0 Deletion 18999 LOC_Os05g03080 expressed protein FN3496-S Chr5 1204001 1223000 0 0 Deletion 18999 LOC_Os05g03090 transposon protein, putative, unclassified, expressed FN3496-S Chr5 3846969 3846971 0 0 Insertion 2 HET FN3496-S Chr5 5949873 C-T 0 0 Single Base Substitution 0 HET FN3496-S Chr5 9909008 C-G 0 0 Single Base Substitution 0 HET FN3496-S Chr6 13904097 13904099 0 0 Insertion 2 HET FN3496-S Chr6 22827900 Chr5 15579833 0 Translocation 0 FN3496-S Chr6 28213001 28226000 0 0 Deletion 12999 FN3496-S Chr6 28361759 28362125 0 0 Inversion 0 FN3496-S Chr6 7813942 7813948 0 0 Deletion 6 HET FN3496-S Chr7 26347161 T-A 0 0 Single Base Substitution 0 Homo FN3496-S Chr7 27853630 T-A 0 0 Single Base Substitution 0 Homo FN3496-S Chr8 2204421 C-A 0 0 Single Base Substitution 0 HET FN3496-S Chr8 28232275 28232276 0 0 Deletion 1 HET FN3496-S Chr8 5706088 C-T 0 0 Single Base Substitution 0 Homo FN3496-S Chr8 9140001 9149000 0 0 Deletion 8999 FN3496-S Chr9 18494317 18494319 0 0 Deletion 2 frameshift_variant Homo LOC_Os09g30380 AP005392-AK108636 - NBS/LRR genes that are S-rich,divergent TIR, divergent NBS, expressed FN3496-S Chr9 2992485 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g06360 retrotransposon, putative, centromere-specific