FN3503-S Chr1 38278001 38324000 0 0 Deletion 45999 LOC_Os01g65920 F-box/LRR-repeat protein 2, putative, expressed FN3503-S Chr1 38278001 38324000 0 0 Deletion 45999 LOC_Os01g65940 expressed protein FN3503-S Chr1 38278001 38324000 0 0 Deletion 45999 LOC_Os01g65950 thioesterase family protein, putative, expressed FN3503-S Chr1 38278001 38324000 0 0 Deletion 45999 LOC_Os01g65970 transcription factor HBP-1b, putative, expressed FN3503-S Chr1 38278001 38324000 0 0 Deletion 45999 LOC_Os01g65980 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3503-S Chr1 38278001 38324000 0 0 Deletion 45999 LOC_Os01g65986 DUF803 domain containing, putative, expressed FN3503-S Chr1 38278001 38324000 0 0 Deletion 45999 LOC_Os01g65992 expressed protein FN3503-S Chr1 38278001 38324000 0 0 Deletion 45999 LOC_Os01g66000 NADH dehydrogenase I subunit N, putative, expressed FN3503-S Chr1 38278001 38324000 0 0 Deletion 45999 LOC_Os01g66010 amino acid transporter, putative, expressed FN3503-S Chr1 38278001 38324000 0 0 Deletion 45999 LOC_Os01g66020 protein kinase family protein, putative, expressed FN3503-S Chr1 38278001 38324000 0 0 Deletion 45999 LOC_Os01g66030 OsMADS2 - MADS-box family gene with MIKCc type-box, expressed FN3503-S Chr1 5465432 C-T 0 0 Single Base Substitution 0 HET FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11000 transposon protein, putative, unclassified, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11010 peptide-N4-asparagine amidase A, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11020 expressed protein FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11040 SCAR-like protein 2, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11054 phosphoenolpyruvate carboxylase, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11070 Alg9-like mannosyltransferase protein, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11080 transposable element protein, putative, containing Pfam profile: PF03732, Retrotrans_gag, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11110 14-3-3 protein, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11120 CID11, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11130 RNA recognition motif containing protein, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11140 retrotransposon protein, putative, unclassified, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11150 gibberellin 2-beta-dioxygenase, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11160 amino acid permease family protein, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11170 expressed protein FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11190 expressed protein FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11200 transforming protein myb, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11210 expressed protein FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11220 hydrolase, acting on carbon-nitrogen, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11230 SOUL heme-binding protein, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11240 DUF538 domain containing protein, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11250 potassium channel KAT1, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11260 phospho-N-acetylmuramoyl-pentapeptide-transferase, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11270 cytochrome P450, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11280 cytochrome P450, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11300 cytochrome P450, putative, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11310 transposon protein, putative, Pong sub-class, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11320 transposon protein, putative, Pong sub-class FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11330 retrotransposon protein, putative, unclassified, expressed FN3503-S Chr1 5866001 6080000 0 0 Deletion 213999 LOC_Os01g11340 cytochrome P450, putative, expressed FN3503-S Chr10 18952757 Chr8 9051134 0 Translocation 0 LOC_Os08g15000 pentatricopeptide repeat domain containing protein, putative, expressed FN3503-S Chr10 18952757 Chr8 9051134 0 Translocation 0 LOC_Os10g35440 pentatricopeptide repeat domain containing protein, putative, expressed FN3503-S Chr10 20554131 20800223 0 0 Inversion 0 LOC_Os10g38489 glutathione S-transferase GSTU6, putative, expressed FN3503-S Chr10 20554152 20811716 0 0 Inversion 0 LOC_Os10g38489 glutathione S-transferase GSTU6, putative, expressed FN3503-S Chr10 4623833 Chr3 32491468 0 Translocation 0 FN3503-S Chr11 13393192 Chr4 9634836 0 Translocation 0 LOC_Os11g23234 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3503-S Chr11 14800675 G-A 0 0 Single Base Substitution 0 HET FN3503-S Chr11 2245230 C-T 0 0 Single Base Substitution 0 Homo FN3503-S Chr11 24440574 Chr5 21302184 0 Translocation 0 FN3503-S Chr11 25316046 C-G 0 0 Single Base Substitution 0 HET FN3503-S Chr11 7158251 Chr8 20379610 0 Translocation 0 FN3503-S Chr11 959677 963747 0 0 Inversion 0 FN3503-S Chr12 19741952 G-A 0 0 Single Base Substitution 0 HET FN3503-S Chr12 2350001 2365000 0 0 Deletion 14999 LOC_Os12g05280 zinc finger, C3HC4 type domain containing protein, expressed FN3503-S Chr12 2350001 2365000 0 0 Deletion 14999 LOC_Os12g05290 retrotransposon protein, putative, unclassified, expressed FN3503-S Chr12 3265532 C-T 0 0 Single Base Substitution 0 HET FN3503-S Chr2 14618703 C-A 0 0 Single Base Substitution 0 Homo FN3503-S Chr2 18693039 C-T 0 0 Single Base Substitution 0 HET FN3503-S Chr2 20665679 G-A 0 0 Single Base Substitution 0 HET FN3503-S Chr3 10623965 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g18970 protein phosphotase protein, putative, expressed FN3503-S Chr3 11810001 11821000 0 0 Deletion 10999 LOC_Os03g20860 expressed protein FN3503-S Chr3 11810001 11821000 0 0 Deletion 10999 LOC_Os03g20870 zinc finger, C3HC4 type domain containing protein, expressed FN3503-S Chr3 11810001 11821000 0 0 Deletion 10999 LOC_Os03g20880 pyruvate kinase, putative, expressed FN3503-S Chr3 7922435 T-A 0 0 Single Base Substitution 0 HET FN3503-S Chr4 13744020 G-A 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os04g24060 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3503-S Chr4 15273890 15273891 0 0 Insertion 1 HET FN3503-S Chr4 16043864 C-T 0 0 Single Base Substitution 0 HET FN3503-S Chr4 19724764 19724765 0 0 Deletion 1 frameshift_variant HET LOC_Os04g32720 retrotransposon protein, putative, unclassified, expressed FN3503-S Chr4 5762559 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g10610 transposon protein, putative, unclassified, expressed FN3503-S Chr4 9046265 G-T 0 0 Single Base Substitution 0 HET FN3503-S Chr5 10199251 C-A 0 0 Single Base Substitution 0 HET FN3503-S Chr5 10428264 A-G 0 0 Single Base Substitution 0 HET FN3503-S Chr6 10779888 Chr3 25611052 0 Translocation 0 FN3503-S Chr6 11298089 G-A 0 0 Single Base Substitution 0 HET FN3503-S Chr6 21361859 Chr1 18784278 0 Translocation 0 FN3503-S Chr6 23047610 23047612 0 0 Deletion 2 frameshift_variant HET LOC_Os06g38820 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3503-S Chr6 9190551 Chr3 2887281 0 Translocation 0 FN3503-S Chr6 9190551 Chr3 2887281 0 Translocation 0 LOC_Os03g05780 4-coumarate--CoA ligase-like 7, putative, expressed FN3503-S Chr7 1606203 C-T 0 0 Single Base Substitution 0 HET FN3503-S Chr7 19020674 T-C 0 0 Single Base Substitution 0 Homo FN3503-S Chr7 24370517 C-T 0 0 Single Base Substitution 0 Homo FN3503-S Chr7 2747816 Chr5 976788 0 Translocation 0 FN3503-S Chr7 2747816 Chr5 976788 0 Translocation 0 LOC_Os05g02720 expressed protein FN3503-S Chr7 29477057 A-G 0 0 Single Base Substitution 0 Homo FN3503-S Chr8 15010654 Chr2 2451550 0 Translocation 0 FN3503-S Chr8 15010654 Chr2 2451550 0 Translocation 0 LOC_Os02g05130 expressed protein FN3503-S Chr8 27426258 G-T 0 0 Single Base Substitution 0 Homo FN3503-S Chr8 5911420 A-G 0 0 Single Base Substitution 0 HET FN3503-S Chr9 20596358 G-A 0 0 Single Base Substitution 0 HET FN3503-S Chr9 21165108 T-A 0 0 Single Base Substitution 0 HET FN3503-S Chr9 22179165 T-C 0 0 Single Base Substitution 0 HET FN3503-S Chr9 22204214 A-G 0 0 Single Base Substitution 0 HET FN3503-S Chr9 429658 Chr8 13845555 0 Translocation 0 FN3503-S Chr9 430602 Chr8 13845553 0 Translocation 0 LOC_Os09g01610 clumping factor B, putative, expressed FN3503-S Chr9 8823492 8823493 0 0 Insertion 1 HET