FN3509-S Chr1 1132358 C-T 0 0 Single Base Substitution 0 Homo FN3509-S Chr1 12257844 G-A 0 0 Single Base Substitution 0 Homo FN3509-S Chr1 24001687 24581787 0 0 Inversion 0 LOC_Os01g42310 retrotransposon protein, putative, unclassified FN3509-S Chr1 24001687 24581787 0 0 Inversion 0 LOC_Os01g43090 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN3509-S Chr1 24001690 24581787 0 0 Inversion 0 LOC_Os01g42310 retrotransposon protein, putative, unclassified FN3509-S Chr1 24001690 24581787 0 0 Inversion 0 LOC_Os01g43090 oxidoreductase, aldo/keto reductase family protein, putative, expressed FN3509-S Chr1 25735569 A-G 0 0 Single Base Substitution 0 HET FN3509-S Chr1 26512601 T-C 0 0 Single Base Substitution 0 HET FN3509-S Chr1 29990181 C-T 0 0 Single Base Substitution 0 HET FN3509-S Chr1 3121199 G-T 0 0 Single Base Substitution 0 HET FN3509-S Chr1 33723415 T-A 0 0 Single Base Substitution 0 HET FN3509-S Chr10 10194137 Chr8 17061525 0 Translocation 0 FN3509-S Chr10 10194137 Chr8 17061525 0 Translocation 0 LOC_Os08g28010 expressed protein FN3509-S Chr10 11618013 G-A 0 0 Single Base Substitution 0 HET FN3509-S Chr10 1457792 A-G 0 0 Single Base Substitution 0 HET FN3509-S Chr10 1559008 T-G 0 0 Single Base Substitution 0 HET FN3509-S Chr10 16108303 C-T 0 0 Single Base Substitution 0 HET FN3509-S Chr10 166129 Chr9 15101848 0 Translocation 0 FN3509-S Chr10 166129 Chr9 15101848 0 Translocation 0 LOC_Os09g25210 expressed protein FN3509-S Chr10 19021659 T-G 0 0 Single Base Substitution 0 HET FN3509-S Chr10 2892358 T-C 0 0 Single Base Substitution 0 HET FN3509-S Chr10 4442986 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g08220 expressed protein FN3509-S Chr10 4939065 G-A 0 0 Single Base Substitution 0 HET FN3509-S Chr10 6108623 C-T 0 0 Single Base Substitution 0 HET FN3509-S Chr11 13301366 T-G 0 0 Single Base Substitution 0 Homo FN3509-S Chr11 16091931 16091936 0 0 Deletion 5 frameshift_variant HET LOC_Os11g27990 hypothetical protein FN3509-S Chr11 27806918 Chr6 9599987 0 Translocation 0 LOC_Os11g45960 expressed protein FN3509-S Chr11 7659516 7659518 0 0 Deletion 2 Homo FN3509-S Chr11 9154882 T-C 0 0 Single Base Substitution 0 HET FN3509-S Chr12 12385383 C-T 0 0 Single Base Substitution 0 HET FN3509-S Chr12 14102647 A-T 0 0 Single Base Substitution 0 HET FN3509-S Chr12 26562552 26562554 0 0 Insertion 2 HET FN3509-S Chr12 3285177 3285192 0 0 Deletion 15 HET FN3509-S Chr12 3606835 C-T 0 0 Single Base Substitution 0 Homo FN3509-S Chr12 8541040 8541482 0 0 Inversion 0 LOC_Os12g14930 ATP synthase protein MI25, putative, expressed FN3509-S Chr2 11859175 G-A 0 0 Single Base Substitution 0 HET FN3509-S Chr2 380001 402000 0 0 Deletion 21999 LOC_Os02g01690 transposon protein, putative, unclassified, expressed FN3509-S Chr2 380001 402000 0 0 Deletion 21999 LOC_Os02g01700 RNA recognition motif containing protein, putative, expressed FN3509-S Chr2 380001 402000 0 0 Deletion 21999 LOC_Os02g01710 peptidase family C78 domain containing protein, expressed FN3509-S Chr2 380001 402000 0 0 Deletion 21999 LOC_Os02g01720 transmembrane protein 120A, putative, expressed FN3509-S Chr2 9342947 A-G 0 0 Single Base Substitution 0 HET FN3509-S Chr3 13765562 Chr2 7858183 0 Translocation 0 FN3509-S Chr3 13765562 Chr2 7858183 0 Translocation 0 LOC_Os02g14320 retrotransposon protein, putative, unclassified, expressed FN3509-S Chr3 14053017 C-T 0 0 Single Base Substitution 0 HET FN3509-S Chr3 21158021 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g38110 retrotransposon, putative, centromere-specific FN3509-S Chr3 23765819 G-A 0 0 Single Base Substitution 0 HET FN3509-S Chr3 29310960 T-C 0 0 Single Base Substitution 0 HET FN3509-S Chr3 29419584 T-G 0 0 Single Base Substitution 0 HET FN3509-S Chr3 7417105 7417107 0 0 Insertion 2 HET FN3509-S Chr4 18766464 G-T 0 0 Single Base Substitution 0 HET FN3509-S Chr4 19567907 G-T 0 0 Single Base Substitution 0 HET FN3509-S Chr4 22392302 G-T 0 0 Single Base Substitution 0 HET FN3509-S Chr4 33870102 Chr1 39643870 0 Translocation 0 LOC_Os01g68210 expressed protein FN3509-S Chr4 33870102 Chr1 39643870 0 Translocation 0 LOC_Os04g56790 TLD family protein, putative, expressed FN3509-S Chr4 33870103 Chr1 39643869 0 Translocation 0 LOC_Os01g68210 expressed protein FN3509-S Chr4 33870103 Chr1 39643869 0 Translocation 0 LOC_Os04g56790 TLD family protein, putative, expressed FN3509-S Chr4 3904617 3904618 0 0 Insertion 1 HET FN3509-S Chr4 7095517 7095521 0 0 Insertion 4 HET FN3509-S Chr5 10172013 10172017 0 0 Deletion 4 frameshift_variant Homo LOC_Os05g17670 retrotransposon protein, putative, Ty1-copia subclass FN3509-S Chr5 2045097 G-A 0 0 Single Base Substitution 0 HET FN3509-S Chr5 25699489 25699495 0 0 Deletion 6 HET FN3509-S Chr5 27864094 G-T 0 0 Single Base Substitution 0 HET FN3509-S Chr5 29510252 29510256 0 0 Deletion 4 Homo FN3509-S Chr5 8243327 8243350 0 0 Deletion 23 HET FN3509-S Chr5 8278192 A-G 0 0 Single Base Substitution 0 Homo FN3509-S Chr5 9228230 G-T 0 0 Single Base Substitution 0 HET FN3509-S Chr6 12532163 T-A 0 0 Single Base Substitution 0 HET FN3509-S Chr6 1926073 1926074 0 0 Deletion 1 HET FN3509-S Chr6 20715218 Chr2 16763829 0 Translocation 0 FN3509-S Chr6 2127557 2127559 0 0 Insertion 2 HET FN3509-S Chr6 25219587 25219599 0 0 Deletion 12 HET FN3509-S Chr6 28177133 29006820 0 0 Inversion 0 FN3509-S Chr6 28177137 29006820 0 0 Inversion 0 FN3509-S Chr6 29123003 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g48140 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3509-S Chr6 29938001 29971000 0 0 Deletion 32999 LOC_Os06g49410 expressed protein FN3509-S Chr6 29938001 29971000 0 0 Deletion 32999 LOC_Os06g49420 retrotransposon protein, putative, unclassified, expressed FN3509-S Chr6 29938001 29971000 0 0 Deletion 32999 LOC_Os06g49430 CGMC_MAPKCMGC_2.11 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed FN3509-S Chr6 29938001 29971000 0 0 Deletion 32999 LOC_Os06g49440 serine esterase, putative, expressed FN3509-S Chr6 29938001 29971000 0 0 Deletion 32999 LOC_Os06g49450 expressed protein FN3509-S Chr6 29938001 29971000 0 0 Deletion 32999 LOC_Os06g49460 Rer1 protein, putative, expressed FN3509-S Chr6 29938001 29971000 0 0 Deletion 32999 LOC_Os06g49470 peptidyl-prolyl cis-trans isomerase, putative, expressed FN3509-S Chr6 4330470 4451600 0 0 Inversion 0 LOC_Os06g08680 expressed protein FN3509-S Chr6 4330473 4451599 0 0 Inversion 0 LOC_Os06g08680 expressed protein FN3509-S Chr7 13136981 C-T 0 0 Single Base Substitution 0 Homo FN3509-S Chr7 25286094 C-A 0 0 Single Base Substitution 0 HET FN3509-S Chr7 26565188 26565197 0 0 Deletion 9 HET FN3509-S Chr7 6431611 6431617 0 0 Insertion 6 inframe_insertion HET LOC_Os07g11640 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3509-S Chr8 16647485 G-A 0 0 Single Base Substitution 0 HET FN3509-S Chr8 24951664 G-A 0 0 Single Base Substitution 0 HET FN3509-S Chr8 27995445 T-C 0 0 Single Base Substitution 0 HET FN3509-S Chr8 2933458 2953899 0 0 Inversion 0 FN3509-S Chr8 2933465 2986499 0 0 Inversion 0 FN3509-S Chr8 2933465 2986499 0 0 Inversion 0 LOC_Os08g05580 aquaporin protein, putative, expressed FN3509-S Chr8 2955001 2990000 0 0 Deletion 34999 LOC_Os08g05530 LSM domain containing protein, expressed FN3509-S Chr8 2955001 2990000 0 0 Deletion 34999 LOC_Os08g05540 expressed protein FN3509-S Chr8 2955001 2990000 0 0 Deletion 34999 LOC_Os08g05550 expressed protein FN3509-S Chr8 2955001 2990000 0 0 Deletion 34999 LOC_Os08g05560 zinc finger, C3HC4 type domain containing protein, expressed FN3509-S Chr8 2955001 2990000 0 0 Deletion 34999 LOC_Os08g05570 monodehydroascorbate reductase, putative, expressed FN3509-S Chr8 2955001 2990000 0 0 Deletion 34999 LOC_Os08g05580 aquaporin protein, putative, expressed FN3509-S Chr8 2955001 2990000 0 0 Deletion 34999 LOC_Os08g05590 aquaporin protein, putative, expressed FN3509-S Chr8 3246037 3505884 0 0 Inversion 0 FN3509-S Chr8 3246256 Chr7 7551140 0 Translocation 0 FN3509-S Chr8 3246256 Chr7 7551140 0 Translocation 0 LOC_Os07g13180 expressed protein FN3509-S Chr8 3246579 Chr7 7551120 0 Translocation 0 FN3509-S Chr8 3246579 Chr7 7551120 0 Translocation 0 LOC_Os07g13180 expressed protein FN3509-S Chr8 3246593 3505890 0 0 Inversion 0 FN3509-S Chr8 4095902 4095903 0 0 Deletion 1 HET FN3509-S Chr8 6570627 C-T 0 0 Single Base Substitution 0 HET FN3509-S Chr8 8842771 8842772 0 0 Deletion 1 HET FN3509-S Chr9 13818087 13818156 0 0 Insertion 69 HET FN3509-S Chr9 20793607 A-T 0 0 Single Base Substitution 0 HET FN3509-S Chr9 21767187 21767188 0 0 Deletion 1 HET FN3509-S Chr9 22635926 C-T 0 0 Single Base Substitution 0 HET FN3509-S Chr9 8805173 T-C 0 0 Single Base Substitution 0 HET