FN3531-S Chr1 21623612 A-T 0 0 Single Base Substitution 0 HET FN3531-S Chr1 28962461 C-T 0 0 Single Base Substitution 0 HET FN3531-S Chr1 32726310 A-C 0 0 Single Base Substitution 0 HET FN3531-S Chr1 39273329 39273331 0 0 Deletion 2 HET FN3531-S Chr1 39401242 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g67790 F-box protein interaction domain containing protein, expressed FN3531-S Chr10 1174414 Chr6 12798215 0 Translocation 0 FN3531-S Chr10 1174414 Chr6 12798215 0 Translocation 0 LOC_Os06g22060 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed FN3531-S Chr10 1174430 Chr6 12794966 0 Translocation 0 FN3531-S Chr10 1174430 Chr6 12794966 0 Translocation 0 LOC_Os06g22060 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed FN3531-S Chr10 12733177 Chr4 504406 0 Translocation 0 LOC_Os04g01790 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3531-S Chr10 12733177 Chr4 504406 0 Translocation 0 LOC_Os10g24750 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3531-S Chr10 20724358 Chr6 13170897 0 Translocation 0 FN3531-S Chr10 20724358 Chr6 13170897 0 Translocation 0 LOC_Os06g22650 VHS and GAT domain containing protein, expressed FN3531-S Chr10 21045132 Chr2 26904737 0 Translocation 0 FN3531-S Chr10 21045148 21474946 0 0 Inversion 0 FN3531-S Chr10 21045148 21474946 0 0 Inversion 0 LOC_Os10g40110 GTP binding protein, putative, expressed FN3531-S Chr10 6270802 G-A 0 0 Single Base Substitution 0 HET FN3531-S Chr10 8053110 Chr7 15100151 0 Translocation 0 LOC_Os10g15210 retrotransposon protein, putative, unclassified, expressed FN3531-S Chr10 8377240 C-G 0 0 Single Base Substitution 0 Homo FN3531-S Chr10 9660742 9660746 0 0 Deletion 4 HET FN3531-S Chr11 12828951 12828952 0 0 Deletion 1 HET FN3531-S Chr11 17701376 Chr8 24046280 0 Translocation 0 FN3531-S Chr11 27371893 Chr6 22347093 0 Translocation 0 LOC_Os06g37730 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3531-S Chr11 27371893 Chr6 22347093 0 Translocation 0 LOC_Os11g45230 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3531-S Chr12 1487417 A-G 0 0 Single Base Substitution 0 Homo FN3531-S Chr12 1495645 1495655 0 0 Deletion 10 Homo FN3531-S Chr12 16452530 Chr5 13458474 0 Translocation 0 FN3531-S Chr12 17626911 G-C 0 0 Single Base Substitution 0 HET FN3531-S Chr12 27006124 Chr2 10461208 0 Translocation 0 FN3531-S Chr12 5351555 C-T 0 0 Single Base Substitution 0 Homo FN3531-S Chr12 5460989 Chr3 32963678 0 Translocation 0 FN3531-S Chr12 5460989 Chr3 32963678 0 Translocation 0 LOC_Os03g57854 MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed FN3531-S Chr2 15764522 G-A 0 0 Single Base Substitution 0 HET FN3531-S Chr2 3574739 3574740 0 0 Insertion 1 HET FN3531-S Chr2 7279088 G-A 0 0 Single Base Substitution 0 Homo FN3531-S Chr2 7279089 G-A 0 0 Single Base Substitution 0 Homo FN3531-S Chr3 14080547 C-A 0 0 Single Base Substitution 0 HET FN3531-S Chr3 20810676 20810677 0 0 Deletion 1 frameshift_variant HET LOC_Os03g37500 retrotransposon protein, putative, unclassified, expressed FN3531-S Chr3 28984926 A-G 0 0 Single Base Substitution 0 Homo FN3531-S Chr3 29453825 30143141 0 0 Inversion 0 FN3531-S Chr3 29453825 30143141 0 0 Inversion 0 LOC_Os03g52540 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3531-S Chr3 29965783 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g52190 retrotransposon protein, putative, unclassified, expressed FN3531-S Chr4 12153925 12153926 0 0 Insertion 1 HET FN3531-S Chr4 16072257 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g27200 expressed protein FN3531-S Chr4 16444772 Chr1 1518196 0 Translocation 0 LOC_Os04g27830 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein, putative, expressed FN3531-S Chr4 19066644 G-A 0 0 Single Base Substitution 0 HET FN3531-S Chr4 22584001 22592000 0 0 Deletion 7999 LOC_Os04g37960 synaptonemal complex protein 2, putative, expressed FN3531-S Chr4 27243840 27243849 0 0 Deletion 9 Homo FN3531-S Chr4 28123861 28123862 0 0 Deletion 1 Homo FN3531-S Chr4 30623384 30899511 0 0 Inversion 0 LOC_Os04g51690 glycosyl hydrolase family 47 domain contain protein, expressed FN3531-S Chr4 30623384 30899511 0 0 Inversion 0 LOC_Os04g52020 PHD-finger domain containing protein, putative, expressed FN3531-S Chr4 30623390 30919261 0 0 Inversion 0 LOC_Os04g51690 glycosyl hydrolase family 47 domain contain protein, expressed FN3531-S Chr4 30623390 30919261 0 0 Inversion 0 LOC_Os04g52050 TNP1, putative, expressed FN3531-S Chr4 30900001 30919000 0 0 Deletion 18999 LOC_Os04g52020 PHD-finger domain containing protein, putative, expressed FN3531-S Chr4 30900001 30919000 0 0 Deletion 18999 LOC_Os04g52030 zinc finger domain, LSD1 subclass family protein, expressed FN3531-S Chr4 30900001 30919000 0 0 Deletion 18999 LOC_Os04g52040 TNP1, putative, expressed FN3531-S Chr4 30900001 30919000 0 0 Deletion 18999 LOC_Os04g52050 TNP1, putative, expressed FN3531-S Chr4 35272157 35272170 0 0 Deletion 13 HET FN3531-S Chr5 13619001 13698000 0 0 Deletion 78999 LOC_Os05g23740 DnaK family protein, putative, expressed FN3531-S Chr5 13619001 13698000 0 0 Deletion 78999 LOC_Os05g23750 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3531-S Chr5 13619001 13698000 0 0 Deletion 78999 LOC_Os05g23760 latency associated nuclear antigen, putative, expressed FN3531-S Chr5 13619001 13698000 0 0 Deletion 78999 LOC_Os05g23770 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3531-S Chr5 13619001 13698000 0 0 Deletion 78999 LOC_Os05g23780 OsMADS70 - MADS-box family gene with M-alpha type-box, expressed FN3531-S Chr5 13619001 13698000 0 0 Deletion 78999 LOC_Os05g23790 retrotransposon, putative, centromere-specific, expressed FN3531-S Chr5 13619001 13698000 0 0 Deletion 78999 LOC_Os05g23800 RNA recognition motif containing protein, putative, expressed FN3531-S Chr5 13619001 13698000 0 0 Deletion 78999 LOC_Os05g23810 retrotransposon protein, putative, unclassified, expressed FN3531-S Chr5 13619001 13698000 0 0 Deletion 78999 LOC_Os05g23820 retrotransposon, putative, centromere-specific FN3531-S Chr5 13619001 13698000 0 0 Deletion 78999 LOC_Os05g23830 endo-1,4-beta-xylanase, putative, expressed FN3531-S Chr5 13901307 G-A 0 0 Single Base Substitution 0 HET FN3531-S Chr5 18087572 C-G 0 0 Single Base Substitution 0 HET FN3531-S Chr5 20034902 G-A 0 0 Single Base Substitution 0 HET FN3531-S Chr5 6652331 Chr4 1448385 0 Translocation 0 FN3531-S Chr5 6652331 Chr4 1448385 0 Translocation 0 LOC_Os04g03370 cysteine-rich receptor-like protein kinase 41 precursor, putative, expressed FN3531-S Chr5 9824846 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os05g17150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3531-S Chr6 12794955 13166787 0 0 Inversion 0 LOC_Os06g22060 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed FN3531-S Chr6 12794955 13166787 0 0 Inversion 0 LOC_Os06g22650 VHS and GAT domain containing protein, expressed FN3531-S Chr6 13169702 Chr2 26904831 0 Translocation 0 LOC_Os06g22650 VHS and GAT domain containing protein, expressed FN3531-S Chr6 13170901 13669762 0 0 Inversion 0 LOC_Os06g22650 VHS and GAT domain containing protein, expressed FN3531-S Chr6 13170901 13669762 0 0 Inversion 0 LOC_Os06g23410 expressed protein FN3531-S Chr6 15430331 15430332 0 0 Deletion 1 HET FN3531-S Chr6 18011958 T-A 0 0 Single Base Substitution 0 HET FN3531-S Chr6 21200642 Chr5 12284704 0 Translocation 0 FN3531-S Chr6 2822811 2822812 0 0 Deletion 1 HET FN3531-S Chr6 6671542 6671543 0 0 Deletion 1 HET FN3531-S Chr6 7488062 C-A 0 0 Single Base Substitution 0 HET FN3531-S Chr7 1054532 C-T 0 0 Single Base Substitution 0 Homo FN3531-S Chr7 19449346 Chr1 12114911 0 Translocation 0 FN3531-S Chr7 26377429 T-A 0 0 Single Base Substitution 0 HET FN3531-S Chr7 7496246 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g13080 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3531-S Chr7 9538051 9538054 0 0 Deletion 3 Homo FN3531-S Chr8 10108511 Chr6 18098131 0 Translocation 0 LOC_Os08g16490 retrotransposon protein, putative, unclassified, expressed FN3531-S Chr8 10395237 Chr1 31269133 0 Translocation 0 FN3531-S Chr8 20352198 20352201 0 0 Deletion 3 inframe_deletion HET LOC_Os08g32840 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed FN3531-S Chr8 21922302 21922305 0 0 Deletion 3 HET FN3531-S Chr8 21987727 C-T 0 0 Single Base Substitution 0 Homo FN3531-S Chr8 25435071 G-A 0 0 Single Base Substitution 0 Homo FN3531-S Chr8 7300632 Chr6 22107489 0 Translocation 0 FN3531-S Chr8 7300632 Chr6 22107489 0 Translocation 0 LOC_Os06g37400 retrotransposon protein, putative, unclassified, expressed FN3531-S Chr9 10172095 Chr5 22161738 0 Translocation 0 LOC_Os05g37830 expressed protein FN3531-S Chr9 10172095 Chr5 22161738 0 Translocation 0 LOC_Os09g16570 hypothetical protein FN3531-S Chr9 10172780 Chr5 22161723 0 Translocation 0 FN3531-S Chr9 10172780 Chr5 22161723 0 Translocation 0 LOC_Os05g37830 expressed protein FN3531-S Chr9 17689969 17689972 0 0 Insertion 3 HET FN3531-S Chr9 18881054 G-A 0 0 Single Base Substitution 0 HET FN3531-S Chr9 6413384 6413387 0 0 Insertion 3 HET FN3531-S Chr9 7153260 7153261 0 0 Insertion 1 HET