FN3532-S Chr1 10355332 A-T 0 0 Single Base Substitution 0 Homo FN3532-S Chr1 10355340 C-T 0 0 Single Base Substitution 0 Homo FN3532-S Chr1 15246826 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g27320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3532-S Chr1 15676516 C-A 0 0 Single Base Substitution 0 Homo FN3532-S Chr1 40262749 G-A 0 0 Single Base Substitution 0 Homo FN3532-S Chr1 43199001 43271000 0 0 Deletion 71999 LOC_Os01g74610 zinc finger, C3HC4 type domain containing protein, expressed FN3532-S Chr1 43199001 43271000 0 0 Deletion 71999 LOC_Os01g74620 expressed protein FN3532-S Chr1 43199001 43271000 0 0 Deletion 71999 LOC_Os01g74630 expressed protein FN3532-S Chr1 43199001 43271000 0 0 Deletion 71999 LOC_Os01g74640 mitochondrial carrier protein, putative, expressed FN3532-S Chr1 43199001 43271000 0 0 Deletion 71999 LOC_Os01g74650 cysteine synthase, mitochondrial precursor, putative, expressed FN3532-S Chr1 43199001 43271000 0 0 Deletion 71999 LOC_Os01g74660 dihydroflavonol-4-reductase, putative, expressed FN3532-S Chr1 43199001 43271000 0 0 Deletion 71999 LOC_Os01g74670 expressed protein FN3532-S Chr1 43199001 43271000 0 0 Deletion 71999 LOC_Os01g74680 retrotransposon protein, putative, unclassified, expressed FN3532-S Chr1 43199001 43271000 0 0 Deletion 71999 LOC_Os01g74690 retrotransposon protein, putative, unclassified, expressed FN3532-S Chr10 2070609 2070610 0 0 Deletion 1 HET FN3532-S Chr11 19928577 19928606 0 0 Deletion 29 HET FN3532-S Chr11 22265957 22265960 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os11g37680 expressed protein FN3532-S Chr11 23275462 23275478 0 0 Deletion 16 HET FN3532-S Chr11 25644115 25644187 0 0 Insertion 72 HET FN3532-S Chr11 999892 1000233 0 0 Inversion 0 FN3532-S Chr12 11096001 11123000 0 0 Deletion 26999 LOC_Os12g19120 transposon protein, putative, unclassified, expressed FN3532-S Chr12 11096001 11123000 0 0 Deletion 26999 LOC_Os12g19130 retrotransposon protein, putative, unclassified, expressed FN3532-S Chr12 11096001 11123000 0 0 Deletion 26999 LOC_Os12g19140 retrotransposon protein, putative, unclassified, expressed FN3532-S Chr12 11096001 11123000 0 0 Deletion 26999 LOC_Os12g19150 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3532-S Chr12 15717575 G-A 0 0 Single Base Substitution 0 HET FN3532-S Chr12 2071890 Chr5 11351521 0 Translocation 0 LOC_Os05g19530 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3532-S Chr12 2071890 Chr5 11351521 0 Translocation 0 LOC_Os12g04830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3532-S Chr12 26316418 26316420 0 0 Insertion 2 HET FN3532-S Chr12 5511207 5511221 0 0 Insertion 14 HET FN3532-S Chr12 9575354 A-T 0 0 Single Base Substitution 0 HET FN3532-S Chr2 172721 172737 0 0 Deletion 16 Homo FN3532-S Chr2 19283769 19283775 0 0 Deletion 6 Homo FN3532-S Chr2 21056932 21056945 0 0 Deletion 13 frameshift_variant Homo LOC_Os02g35080 T-complex protein 11, putative, expressed FN3532-S Chr2 23862770 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g39540 transposon protein, putative, unclassified, expressed FN3532-S Chr2 2647082 C-T 0 0 Single Base Substitution 0 Homo FN3532-S Chr3 11957752 T-C 0 0 Single Base Substitution 0 HET FN3532-S Chr3 12042471 C-A 0 0 Single Base Substitution 0 HET FN3532-S Chr3 261831 Chr1 43204190 0 Translocation 0 LOC_Os01g74610 zinc finger, C3HC4 type domain containing protein, expressed FN3532-S Chr3 261831 Chr1 43204190 0 Translocation 0 LOC_Os03g01340 transposon protein, putative, unclassified FN3532-S Chr3 261832 Chr1 43204199 0 Translocation 0 LOC_Os01g74610 zinc finger, C3HC4 type domain containing protein, expressed FN3532-S Chr3 261832 Chr1 43204199 0 Translocation 0 LOC_Os03g01340 transposon protein, putative, unclassified FN3532-S Chr4 15255276 A-C 0 0 Single Base Substitution 0 Homo FN3532-S Chr4 15255278 T-A 0 0 Single Base Substitution 0 Homo FN3532-S Chr4 15255284 G-T 0 0 Single Base Substitution 0 HET FN3532-S Chr4 27157763 27157771 0 0 Deletion 8 frameshift_variant Homo LOC_Os04g45860 transposon protein, putative, unclassified, expressed FN3532-S Chr5 15370221 C-T 0 0 Single Base Substitution 0 HET FN3532-S Chr5 17774816 A-G 0 0 Single Base Substitution 0 HET FN3532-S Chr5 18412500 C-T 0 0 Single Base Substitution 0 HET FN3532-S Chr5 21473001 21483000 0 0 Deletion 9999 LOC_Os05g36210 expressed protein FN3532-S Chr5 21473001 21483000 0 0 Deletion 9999 LOC_Os05g36220 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3532-S Chr5 21473001 21483000 0 0 Deletion 9999 LOC_Os05g36230 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3532-S Chr5 21473001 21483000 0 0 Deletion 9999 LOC_Os05g36240 expressed protein FN3532-S Chr5 22283813 Chr2 13372101 0 Translocation 0 LOC_Os05g37980 PSF1 - Putative GINS complex subunit, expressed FN3532-S Chr5 22283814 Chr2 13372156 0 Translocation 0 LOC_Os05g37980 PSF1 - Putative GINS complex subunit, expressed FN3532-S Chr6 11612322 11612324 0 0 Deletion 2 HET FN3532-S Chr6 26960327 G-C 0 0 Single Base Substitution 0 HET FN3532-S Chr6 381220 C-A 0 0 Single Base Substitution 0 HET FN3532-S Chr6 9590463 9590487 0 0 Deletion 24 splice_acceptor_variant&splice_region_variant&intron_variant HET LOC_Os06g16660 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3532-S Chr7 20899762 20899766 0 0 Insertion 4 HET FN3532-S Chr7 23689484 C-T 0 0 Single Base Substitution 0 HET FN3532-S Chr7 386793 A-C 0 0 Single Base Substitution 0 HET FN3532-S Chr7 386795 T-A 0 0 Single Base Substitution 0 HET FN3532-S Chr8 15805815 C-G 0 0 Single Base Substitution 0 HET FN3532-S Chr8 16743782 G-A 0 0 Single Base Substitution 0 HET FN3532-S Chr8 24190218 24190249 0 0 Insertion 31 HET FN3532-S Chr8 3790537 A-T 0 0 Single Base Substitution 0 HET FN3532-S Chr8 8686817 C-T 0 0 Single Base Substitution 0 HET FN3532-S Chr8 8686820 T-G 0 0 Single Base Substitution 0 HET FN3532-S Chr8 9003996 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g14940 receptor kinase, putative, expressed FN3532-S Chr8 9022097 9022125 0 0 Deletion 28 HET FN3532-S Chr9 1100572 T-A 0 0 Single Base Substitution 0 HET FN3532-S Chr9 1235909 1235911 0 0 Deletion 2 HET FN3532-S Chr9 13372874 G-A 0 0 Single Base Substitution 0 HET FN3532-S Chr9 14898345 C-T 0 0 Single Base Substitution 0 Homo FN3532-S Chr9 606095 606097 0 0 Deletion 2 frameshift_variant HET LOC_Os09g01900 transposon protein, putative, CACTA, En/Spm sub-class, expressed