FN3538-S Chr1 15306803 15306804 0 0 Deletion 1 HET FN3538-S Chr1 18236942 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g33120 retrotransposon, putative, centromere-specific, expressed FN3538-S Chr1 3380185 3380186 0 0 Deletion 1 Homo FN3538-S Chr1 35581232 G-A 0 0 Single Base Substitution 0 HET FN3538-S Chr1 35974932 35974935 0 0 Deletion 3 HET FN3538-S Chr1 37122457 G-T 0 0 Single Base Substitution 0 HET FN3538-S Chr1 43259507 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g74680 retrotransposon protein, putative, unclassified, expressed FN3538-S Chr10 12849436 12849438 0 0 Insertion 2 HET FN3538-S Chr10 21992545 21992546 0 0 Deletion 1 frameshift_variant HET LOC_Os10g40934 flavonol synthase/flavanone 3-hydroxylase, putative, expressed FN3538-S Chr11 15422684 T-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g26850 erythronate-4-phosphate dehydrogenase, putative, expressed FN3538-S Chr11 15567450 G-T 0 0 Single Base Substitution 0 HET FN3538-S Chr11 20973329 T-G 0 0 Single Base Substitution 0 HET FN3538-S Chr11 23306909 A-T 0 0 Single Base Substitution 0 HET FN3538-S Chr11 24214864 G-A 0 0 Single Base Substitution 0 HET FN3538-S Chr11 4045462 4045476 0 0 Deletion 14 HET FN3538-S Chr11 7888509 C-T 0 0 Single Base Substitution 0 Homo FN3538-S Chr11 7888510 A-G 0 0 Single Base Substitution 0 Homo FN3538-S Chr12 17502484 A-C 0 0 Single Base Substitution 0 HET FN3538-S Chr12 17878258 17878259 0 0 Insertion 1 HET FN3538-S Chr12 19447633 Chr1 23373052 0 Translocation 0 FN3538-S Chr12 22721221 G-A 0 0 Single Base Substitution 0 HET FN3538-S Chr12 25393152 25487005 0 0 Inversion 0 LOC_Os12g41040 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3538-S Chr12 25393152 25487006 0 0 Inversion 0 LOC_Os12g41040 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3538-S Chr12 3225262 A-G 0 0 Single Base Substitution 0 HET FN3538-S Chr12 8797140 8797142 0 0 Deletion 2 HET FN3538-S Chr2 11287329 T-A 0 0 Single Base Substitution 0 HET FN3538-S Chr2 13668057 13668210 0 0 Deletion 153 HET FN3538-S Chr2 15658317 15658318 0 0 Deletion 1 HET FN3538-S Chr2 20634921 G-A 0 0 Single Base Substitution 0 HET FN3538-S Chr2 21079701 21079702 0 0 Deletion 1 HET FN3538-S Chr2 31719340 A-T 0 0 Single Base Substitution 0 HET FN3538-S Chr2 33873475 C-T 0 0 Single Base Substitution 0 HET FN3538-S Chr2 33873476 A-T 0 0 Single Base Substitution 0 HET FN3538-S Chr2 33873477 A-T 0 0 Single Base Substitution 0 HET FN3538-S Chr3 23350219 Chr2 25750918 0 Translocation 0 FN3538-S Chr3 35145055 G-A 0 0 Single Base Substitution 0 HET FN3538-S Chr4 12763336 A-G 0 0 Single Base Substitution 0 Homo FN3538-S Chr4 14516330 A-T 0 0 Single Base Substitution 0 HET FN3538-S Chr4 1453397 G-A 0 0 Single Base Substitution 0 HET FN3538-S Chr4 14867904 G-A 0 0 Single Base Substitution 0 Homo FN3538-S Chr4 22770971 22770978 0 0 Deletion 7 Homo FN3538-S Chr4 28947072 28948009 0 0 Deletion 937 HET FN3538-S Chr4 32084501 32209711 0 0 Inversion 0 FN3538-S Chr4 32084501 32209711 0 0 Inversion 0 LOC_Os04g54050 retrotransposon protein, putative, unclassified FN3538-S Chr5 17817799 G-C 0 0 Single Base Substitution 0 HET FN3538-S Chr5 19381816 19381817 0 0 Deletion 1 HET FN3538-S Chr5 5207897 5207899 0 0 Insertion 2 HET FN3538-S Chr5 8132922 8132923 0 0 Deletion 1 HET FN3538-S Chr5 9224093 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g16290 transposon protein, putative, unclassified, expressed FN3538-S Chr6 14439835 A-T 0 0 Single Base Substitution 0 HET FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25550 retrotransposon protein, putative, unclassified, expressed FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25560 retrotransposon protein, putative, unclassified, expressed FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25570 hypothetical protein FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25580 transposon protein, putative, unclassified, expressed FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25590 expressed protein FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25600 hypothetical protein FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25605 expressed protein FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25610 transposon protein, putative, unclassified, expressed FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25620 retrotransposon protein, putative, Ty3-gypsy subclass FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25630 retrotransposon protein, putative, unclassified, expressed FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25640 retrotransposon protein, putative, unclassified FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25650 retrotransposon protein, putative, Ty3-gypsy subclass FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25660 transposon protein, putative, unclassified, expressed FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25670 expressed protein FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25680 transposon protein, putative, CACTA, En/Spm sub-class FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25690 retrotransposon protein, putative, unclassified, expressed FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25700 retrotransposon protein, putative, unclassified, expressed FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25710 retrotransposon protein, putative, unclassified, expressed FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25720 transposon protein, putative, CACTA, En/Spm sub-class FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25730 retrotransposon protein, putative, unclassified, expressed FN3538-S Chr6 14940001 15039000 0 0 Deletion 98999 LOC_Os06g25740 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3538-S Chr6 15905416 G-T 0 0 Single Base Substitution 0 HET FN3538-S Chr6 16239120 T-C 0 0 Single Base Substitution 0 HET FN3538-S Chr6 16329316 G-A 0 0 Single Base Substitution 0 HET FN3538-S Chr6 4128407 G-T 0 0 Single Base Substitution 0 HET FN3538-S Chr6 7725528 7725550 0 0 Deletion 22 HET FN3538-S Chr7 12229807 12229808 0 0 Deletion 1 HET FN3538-S Chr7 20413184 20631697 0 0 Inversion 0 LOC_Os07g34130 TBC domain containing protein, expressed FN3538-S Chr7 28925081 28925089 0 0 Deletion 8 HET FN3538-S Chr8 17868834 17868836 0 0 Deletion 2 HET FN3538-S Chr8 23499462 23499468 0 0 Deletion 6 Homo FN3538-S Chr8 5886995 C-T 0 0 Single Base Substitution 0 Homo FN3538-S Chr9 16923207 Chr4 13705017 0 Translocation 0 LOC_Os09g27810 retrotransposon protein, putative, unclassified FN3538-S Chr9 7229983 Chr3 32905402 0 Translocation 0