FN3541-S Chr1 12155393 C-A 0 0 Single Base Substitution 0 HET FN3541-S Chr1 13992440 T-A 0 0 Single Base Substitution 0 HET FN3541-S Chr1 14204342 14580716 0 0 Inversion 0 FN3541-S Chr1 14204342 14580716 0 0 Inversion 0 LOC_Os01g25710 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3541-S Chr1 14204355 14580725 0 0 Inversion 0 FN3541-S Chr1 14204355 14580725 0 0 Inversion 0 LOC_Os01g25710 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25386 multidrug resistance-associated protein, putative, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25402 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25430 expressed protein FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25440 thiamin pyrophosphokinase 1, putative, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25450 AIG1 family protein, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25460 uncharacterized protein At4g06744 precursor, putative, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25470 flavin monooxygenase, putative, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25484 ferredoxin--nitrite reductase, putative, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25500 sterol carrier protein-2, putative, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25510 alpha-amylase isozyme C, putative, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25520 ferredoxin-nitrite reductase, putative, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25530 pentatricopeptide repeat protein PPR986-12, putative, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25540 RALFL6 - Rapid ALkalinization Factor RALF family protein precursor, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25550 hypothetical protein FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25560 RALFL7 - Rapid ALkalinization Factor RALF family protein precursor, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25580 retrotransposon protein, putative, unclassified, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25590 retrotransposon protein, putative, unclassified, expressed FN3541-S Chr1 14339001 14513000 0 0 Deletion 173999 LOC_Os01g25600 tetratricopeptide repeat domain containing protein, expressed FN3541-S Chr1 18080199 C-T 0 0 Single Base Substitution 0 HET FN3541-S Chr1 41299332 C-T 0 0 Single Base Substitution 0 HET FN3541-S Chr1 5031583 A-G 0 0 Single Base Substitution 0 Homo FN3541-S Chr10 12122525 C-T 0 0 Single Base Substitution 0 HET FN3541-S Chr10 13609803 G-A 0 0 Single Base Substitution 0 HET FN3541-S Chr10 1652165 A-G 0 0 Single Base Substitution 0 HET FN3541-S Chr10 20038926 G-A 0 0 Single Base Substitution 0 HET FN3541-S Chr10 2989728 T-A 0 0 Single Base Substitution 0 Homo FN3541-S Chr10 7866559 Chr9 13613574 0 Translocation 0 FN3541-S Chr10 7866559 Chr9 13613574 0 Translocation 0 LOC_Os09g23050 expressed protein FN3541-S Chr10 9271962 C-T 0 0 Single Base Substitution 0 HET FN3541-S Chr10 9580686 9686502 0 0 Inversion 0 FN3541-S Chr10 9580686 9686502 0 0 Inversion 0 LOC_Os10g19020 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3541-S Chr11 11970684 A-T 0 0 Single Base Substitution 0 Homo FN3541-S Chr11 14749130 14749131 0 0 Deletion 1 Homo FN3541-S Chr11 17430207 G-A 0 0 Single Base Substitution 0 Homo FN3541-S Chr11 19390245 19639956 0 0 Inversion 0 FN3541-S Chr11 1987583 1987585 0 0 Deletion 2 HET FN3541-S Chr11 20699516 A-T 0 0 Single Base Substitution 0 HET FN3541-S Chr11 21952848 21952849 0 0 Deletion 1 frameshift_variant HET LOC_Os11g37180 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3541-S Chr11 23773095 23773133 0 0 Deletion 38 frameshift_variant HET LOC_Os11g39880 retrotransposon protein, putative, Ty3-gypsy subclass FN3541-S Chr11 26775012 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os11g44300 expressed protein FN3541-S Chr11 9282776 G-C 0 0 Single Base Substitution 0 HET FN3541-S Chr12 10329996 C-T 0 0 Single Base Substitution 0 HET FN3541-S Chr12 12223677 C-A 0 0 Single Base Substitution 0 HET FN3541-S Chr2 14565839 G-A 0 0 Single Base Substitution 0 Homo FN3541-S Chr2 8678110 8678111 0 0 Insertion 1 HET FN3541-S Chr3 26117496 G-A 0 0 Single Base Substitution 0 HET FN3541-S Chr3 30261951 C-A 0 0 Single Base Substitution 0 HET FN3541-S Chr4 17198921 Chr1 14515041 0 Translocation 0 FN3541-S Chr4 17198921 Chr1 14515041 0 Translocation 0 LOC_Os01g25610 40S ribosomal protein S4, putative, expressed FN3541-S Chr4 17198929 Chr1 14514897 0 Translocation 0 FN3541-S Chr4 17198929 Chr1 14514897 0 Translocation 0 LOC_Os01g25610 40S ribosomal protein S4, putative, expressed FN3541-S Chr4 2537219 A-T 0 0 Single Base Substitution 0 HET FN3541-S Chr4 2730995 Chr2 6409688 0 Translocation 0 LOC_Os02g12320 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3541-S Chr4 2730995 Chr2 6409688 0 Translocation 0 LOC_Os04g05430 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3541-S Chr4 2872949 2873059 0 0 Deletion 110 HET FN3541-S Chr4 4393419 G-A 0 0 Single Base Substitution 0 Homo FN3541-S Chr4 7056921 G-A 0 0 Single Base Substitution 0 HET FN3541-S Chr5 11819601 11819602 0 0 Insertion 1 HET FN3541-S Chr5 16004355 G-T 0 0 Single Base Substitution 0 HET FN3541-S Chr5 20357940 20357941 0 0 Deletion 1 HET FN3541-S Chr5 2274830 2274831 0 0 Deletion 1 HET FN3541-S Chr5 9514456 9514457 0 0 Deletion 1 HET FN3541-S Chr6 13856540 T-G 0 0 Single Base Substitution 0 Homo FN3541-S Chr6 16250553 Chr4 25868275 0 Translocation 0 FN3541-S Chr6 16250553 Chr4 25868275 0 Translocation 0 LOC_Os04g43710 CAMK_CAMK_like.3 - CAMK includes calcium/calmodulin depedent protein kinases, expressed FN3541-S Chr6 16775155 16775156 0 0 Deletion 1 frameshift_variant HET LOC_Os06g29350 myosin, putative, expressed FN3541-S Chr6 20546556 G-A 0 0 Single Base Substitution 0 Homo FN3541-S Chr6 27138961 Chr4 33005151 0 Translocation 0 LOC_Os06g44890 villin protein, putative, expressed FN3541-S Chr6 27144240 Chr4 33003979 0 Translocation 0 LOC_Os06g44890 villin protein, putative, expressed FN3541-S Chr6 4104309 T-A 0 0 Single Base Substitution 0 HET FN3541-S Chr7 20438005 20438007 0 0 Insertion 2 HET FN3541-S Chr7 2319483 T-C 0 0 Single Base Substitution 0 HET FN3541-S Chr7 23881886 A-C 0 0 Single Base Substitution 0 HET FN3541-S Chr8 144729 144757 0 0 Deletion 28 HET FN3541-S Chr8 5910928 5910938 0 0 Deletion 10 frameshift_variant HET LOC_Os08g10190 retrotransposon protein, putative, unclassified, expressed FN3541-S Chr8 9123440 9123442 0 0 Deletion 2 HET FN3541-S Chr9 13033444 13033445 0 0 Deletion 1 Homo FN3541-S Chr9 19927531 A-C 0 0 Single Base Substitution 0 HET