FN3552-S Chr1 16036073 A-T 0 0 Single Base Substitution 0 Homo FN3552-S Chr1 30105243 30105244 0 0 Deletion 1 HET FN3552-S Chr1 39616305 G-T 0 0 Single Base Substitution 0 Homo FN3552-S Chr1 39616818 39616823 0 0 Deletion 5 Homo FN3552-S Chr10 16970847 G-A 0 0 Single Base Substitution 0 Homo FN3552-S Chr10 21241007 Chr9 3932576 0 Translocation 0 FN3552-S Chr10 5459001 5489000 0 0 Deletion 29999 LOC_Os10g10040 cytochrome P450, putative, expressed FN3552-S Chr10 5459001 5489000 0 0 Deletion 29999 LOC_Os10g10050 expressed protein FN3552-S Chr10 5459001 5489000 0 0 Deletion 29999 LOC_Os10g10060 expressed protein FN3552-S Chr10 5459001 5489000 0 0 Deletion 29999 LOC_Os10g10080 exostosin family domain containing protein, expressed FN3552-S Chr10 7799732 7799738 0 0 Deletion 6 HET FN3552-S Chr11 10438391 G-T 0 0 Single Base Substitution 0 Homo FN3552-S Chr11 13193757 C-A 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os11g22950 retrotransposon, putative, centromere-specific, expressed FN3552-S Chr11 13193758 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g22950 retrotransposon, putative, centromere-specific, expressed FN3552-S Chr11 13365102 T-C 0 0 Single Base Substitution 0 Homo FN3552-S Chr11 19931472 Chr4 16892855 0 Translocation 0 FN3552-S Chr11 21228561 21228562 0 0 Insertion 1 HET FN3552-S Chr11 23218875 23218887 0 0 Deletion 12 HET FN3552-S Chr11 27079163 T-C 0 0 Single Base Substitution 0 HET FN3552-S Chr11 28408021 Chr6 1078299 0 Translocation 0 LOC_Os06g02930 expressed protein FN3552-S Chr11 28408021 Chr6 1078299 0 Translocation 0 LOC_Os11g47240 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed FN3552-S Chr11 4907894 Chr4 7638606 0 Translocation 0 FN3552-S Chr11 4907894 Chr4 7638606 0 Translocation 0 LOC_Os04g13690 retrotransposon protein, putative, Ty3-gypsy subclass FN3552-S Chr11 5135399 C-T 0 0 Single Base Substitution 0 Homo FN3552-S Chr11 8323001 8359000 0 0 Deletion 35999 LOC_Os11g14790 retrotransposon protein, putative, unclassified, expressed FN3552-S Chr11 8323001 8359000 0 0 Deletion 35999 LOC_Os11g14810 expressed protein FN3552-S Chr11 8323001 8359000 0 0 Deletion 35999 LOC_Os11g14820 expressed protein FN3552-S Chr11 8323001 8359000 0 0 Deletion 35999 LOC_Os11g14830 retrotransposon protein, putative, unclassified, expressed FN3552-S Chr11 8323001 8359000 0 0 Deletion 35999 LOC_Os11g14840 retrotransposon protein, putative, unclassified, expressed FN3552-S Chr11 8323001 8359000 0 0 Deletion 35999 LOC_Os11g14850 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3552-S Chr11 9386839 9386840 0 0 Insertion 1 frameshift_variant Homo LOC_Os11g16920 retrotransposon protein, putative, unclassified, expressed FN3552-S Chr12 11468824 T-G 0 0 Single Base Substitution 0 Homo FN3552-S Chr12 16671151 16671161 0 0 Deletion 10 frameshift_variant HET LOC_Os12g28220 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3552-S Chr12 21289054 C-G 0 0 Single Base Substitution 0 HET FN3552-S Chr12 22863412 22863418 0 0 Insertion 6 HET FN3552-S Chr12 22896614 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os12g37300 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3552-S Chr2 29589289 G-A 0 0 Single Base Substitution 0 HET FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51110 aquaporin protein, putative, expressed FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51119 expressed protein FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51130 glycosyl transferase 8 domain containing protein, putative, expressed FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51140 N-rich protein, putative, expressed FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51150 sphingolipid C4-hydroxylase SUR2, putative, expressed FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51160 hydrolase, acting on carbon-nitrogen, putative, expressed FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51164 expressed protein FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51170 expressed protein FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51180 cullin, putative, expressed FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51190 retrotransposon protein, putative, unclassified, expressed FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51200 retrotransposon protein, putative, LINE subclass, expressed FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51210 expressed protein FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51220 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3552-S Chr2 31256001 31345000 0 0 Deletion 88999 LOC_Os02g51230 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3552-S Chr3 14000926 14000927 0 0 Deletion 1 frameshift_variant HET LOC_Os03g24580 transmembrane protein 85, putative, expressed FN3552-S Chr4 20155780 T-G 0 0 Single Base Substitution 0 HET FN3552-S Chr4 26353955 T-C 0 0 Single Base Substitution 0 Homo FN3552-S Chr4 29304968 T-C 0 0 Single Base Substitution 0 HET FN3552-S Chr4 3116779 C-T 0 0 Single Base Substitution 0 STOP_GAINED Homo LOC_Os04g06010 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3552-S Chr4 32466277 A-C 0 0 Single Base Substitution 0 HET FN3552-S Chr4 804283 C-A 0 0 Single Base Substitution 0 HET FN3552-S Chr4 804284 G-A 0 0 Single Base Substitution 0 HET FN3552-S Chr4 8143895 8143916 0 0 Deletion 21 HET FN3552-S Chr4 9937422 C-A 0 0 Single Base Substitution 0 HET FN3552-S Chr5 18324072 18324189 0 0 Inversion 0 FN3552-S Chr5 19310522 A-T 0 0 Single Base Substitution 0 HET FN3552-S Chr5 26441617 G-A 0 0 Single Base Substitution 0 HET FN3552-S Chr5 29712001 29734000 0 0 Deletion 21999 LOC_Os05g51780 zinc finger, C3HC4 type domain containing protein, expressed FN3552-S Chr5 29712001 29734000 0 0 Deletion 21999 LOC_Os05g51790 RecF/RecN/SMC N terminal domain containing protein, expressed FN3552-S Chr5 4133043 T-C 0 0 Single Base Substitution 0 HET FN3552-S Chr5 4133048 C-A 0 0 Single Base Substitution 0 HET FN3552-S Chr6 14215155 14215156 0 0 Deletion 1 HET FN3552-S Chr6 15410526 15410534 0 0 Deletion 8 Homo FN3552-S Chr6 25586820 25586873 0 0 Deletion 53 HET FN3552-S Chr6 31180023 31180083 0 0 Insertion 60 HET FN3552-S Chr6 6968587 G-A 0 0 Single Base Substitution 0 Homo FN3552-S Chr6 8181927 C-T 0 0 Single Base Substitution 0 Homo FN3552-S Chr6 9522558 A-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os06g16580 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3552-S Chr7 12408461 Chr1 27404387 0 Translocation 0 FN3552-S Chr7 6711645 G-C 0 0 Single Base Substitution 0 HET FN3552-S Chr8 11631622 11631623 0 0 Deletion 1 HET FN3552-S Chr8 12067455 12067465 0 0 Deletion 10 HET FN3552-S Chr8 1334234 G-A 0 0 Single Base Substitution 0 HET FN3552-S Chr8 23667308 A-T 0 0 Single Base Substitution 0 HET FN3552-S Chr8 4229675 4229683 0 0 Deletion 8 HET FN3552-S Chr9 22138025 G-A 0 0 Single Base Substitution 0 Homo FN3552-S Chr9 3381403 3381414 0 0 Deletion 11 Homo FN3552-S Chr9 9574141 Chr1 6538683 0 Translocation 0