FN3554-S Chr1 15840058 15840059 0 0 Deletion 1 HET FN3554-S Chr1 25393231 C-A 0 0 Single Base Substitution 0 HET FN3554-S Chr10 11805623 T-C 0 0 Single Base Substitution 0 HET FN3554-S Chr10 17700705 T-C 0 0 Single Base Substitution 0 HET FN3554-S Chr10 23089442 23089446 0 0 Deletion 4 frameshift_variant Homo LOC_Os10g42820 early-responsive to dehydration protein-related, putative, expressed FN3554-S Chr10 4780094 4780097 0 0 Insertion 3 inframe_insertion HET LOC_Os10g08830 expressed protein FN3554-S Chr11 13631253 G-A 0 0 Single Base Substitution 0 Homo FN3554-S Chr11 15785786 Chr7 9520285 0 Translocation 0 FN3554-S Chr11 18164434 Chr10 19652802 0 Translocation 0 FN3554-S Chr11 18798651 18798653 0 0 Insertion 2 frameshift_variant HET LOC_Os11g31970 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3554-S Chr11 21412844 T-A 0 0 Single Base Substitution 0 HET FN3554-S Chr11 21456023 21456037 0 0 Deletion 14 HET FN3554-S Chr11 21702208 21702216 0 0 Deletion 8 HET FN3554-S Chr11 24012797 24012800 0 0 Deletion 3 Homo FN3554-S Chr11 27266944 Chr5 16159513 0 Translocation 0 FN3554-S Chr11 27266944 Chr5 16159513 0 Translocation 0 LOC_Os05g27740 expressed protein FN3554-S Chr12 12075798 G-A 0 0 Single Base Substitution 0 HET FN3554-S Chr12 15228442 15228456 0 0 Insertion 14 frameshift_variant HET LOC_Os12g26140 retrotransposon protein, putative, unclassified, expressed FN3554-S Chr12 4229610 T-A 0 0 Single Base Substitution 0 Homo FN3554-S Chr2 12905459 A-G 0 0 Single Base Substitution 0 HET FN3554-S Chr2 18758570 18758571 0 0 Deletion 1 HET FN3554-S Chr2 27513553 G-A 0 0 Single Base Substitution 0 HET FN3554-S Chr2 27752804 C-T 0 0 Single Base Substitution 0 HET FN3554-S Chr2 29098736 29098742 0 0 Deletion 6 HET FN3554-S Chr2 29128653 29128654 0 0 Deletion 1 HET FN3554-S Chr3 10030351 10030368 0 0 Deletion 17 Homo FN3554-S Chr3 15098101 15098103 0 0 Deletion 2 Homo FN3554-S Chr3 15524635 C-T 0 0 Single Base Substitution 0 Homo FN3554-S Chr3 22683600 C-A 0 0 Single Base Substitution 0 Homo FN3554-S Chr3 24973032 C-T 0 0 Single Base Substitution 0 STOP_GAINED HET LOC_Os03g44390 retrotransposon protein, putative, unclassified, expressed FN3554-S Chr3 2665817 T-C 0 0 Single Base Substitution 0 HET FN3554-S Chr3 30157618 C-T 0 0 Single Base Substitution 0 Homo FN3554-S Chr3 31349209 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g55100 cyclic nucleotide-gated ion channel 2, putative, expressed FN3554-S Chr3 7129959 C-T 0 0 Single Base Substitution 0 Homo FN3554-S Chr4 12901740 12901783 0 0 Insertion 43 HET FN3554-S Chr4 14567068 C-G 0 0 Single Base Substitution 0 HET FN3554-S Chr4 1474122 C-T 0 0 Single Base Substitution 0 HET FN3554-S Chr4 1545009 T-A 0 0 Single Base Substitution 0 HET FN3554-S Chr4 27471956 27471959 0 0 Insertion 3 HET FN3554-S Chr4 679086 A-C 0 0 Single Base Substitution 0 HET FN3554-S Chr4 9212804 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os04g16810 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3554-S Chr5 10467515 C-T 0 0 Single Base Substitution 0 Homo FN3554-S Chr5 10974093 C-T 0 0 Single Base Substitution 0 Homo FN3554-S Chr5 14097366 Chr3 23173849 0 Translocation 0 LOC_Os03g41710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3554-S Chr5 14097366 Chr3 23173849 0 Translocation 0 LOC_Os05g24380 retrotransposon protein, putative, unclassified, expressed FN3554-S Chr5 14520416 14520418 0 0 Insertion 2 HET FN3554-S Chr5 1965199 A-G 0 0 Single Base Substitution 0 Homo FN3554-S Chr5 5022236 Chr2 25341897 0 Translocation 0 FN3554-S Chr5 5022236 Chr2 25341897 0 Translocation 0 LOC_Os02g42134 ARF GTPase-activating domain-containing protein, putative, expressed FN3554-S Chr5 6504540 C-T 0 0 Single Base Substitution 0 Homo FN3554-S Chr6 16630623 16630624 0 0 Insertion 1 frameshift_variant HET LOC_Os06g29140 retrotransposon protein, putative, unclassified, expressed FN3554-S Chr6 25979515 Chr5 4126861 0 Translocation 0 LOC_Os06g43220 AP2 domain containing protein, expressed FN3554-S Chr6 25981887 Chr5 4126861 0 Translocation 0 FN3554-S Chr6 25981897 Chr1 3002916 0 Translocation 0 FN3554-S Chr6 25982425 Chr1 3002913 0 Translocation 0 FN3554-S Chr6 25982503 Chr1 3001300 0 Translocation 0 FN3554-S Chr6 4793171 Chr5 4127582 0 Translocation 0 FN3554-S Chr6 5718480 5718482 0 0 Insertion 2 HET FN3554-S Chr6 7098928 T-C 0 0 Single Base Substitution 0 Homo FN3554-S Chr7 12403177 C-T 0 0 Single Base Substitution 0 Homo FN3554-S Chr8 18483821 C-A 0 0 Single Base Substitution 0 HET FN3554-S Chr8 24826593 A-T 0 0 Single Base Substitution 0 Homo FN3554-S Chr8 4252693 T-A 0 0 Single Base Substitution 0 HET FN3554-S Chr9 2084917 G-C 0 0 Single Base Substitution 0 Homo FN3554-S Chr9 3997712 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g07860 retrotransposon protein, putative, unclassified FN3554-S Chr9 5564247 5564252 0 0 Deletion 5 frameshift_variant&splice_region_variant HET LOC_Os09g10220 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3554-S Chr9 5829123 5829124 0 0 Insertion 1 HET FN3554-S Chr9 5897728 5897732 0 0 Deletion 4 Homo