FN3557-S Chr1 16779637 T-G 0 0 Single Base Substitution 0 HET FN3557-S Chr1 22316922 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os01g39570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3557-S Chr1 23558315 G-A 0 0 Single Base Substitution 0 Homo FN3557-S Chr1 27337341 27337342 0 0 Deletion 1 HET FN3557-S Chr1 30207102 30207108 0 0 Deletion 6 Homo FN3557-S Chr1 33095962 33095963 0 0 Deletion 1 frameshift_variant&stop_lost Homo LOC_Os01g57270 disease resistance RPP13-like protein 1, putative, expressed FN3557-S Chr1 34137040 G-A 0 0 Single Base Substitution 0 HET FN3557-S Chr1 43134340 43134343 0 0 Insertion 3 HET FN3557-S Chr10 13779123 13779125 0 0 Insertion 2 HET FN3557-S Chr10 14834614 A-T 0 0 Single Base Substitution 0 Homo FN3557-S Chr10 1983481 G-A 0 0 Single Base Substitution 0 Homo FN3557-S Chr10 1983482 G-A 0 0 Single Base Substitution 0 Homo FN3557-S Chr10 2607712 Chr6 15332761 0 Translocation 0 LOC_Os10g05270 retrotransposon protein, putative, Ty3-gypsy subclass FN3557-S Chr10 3165318 3165324 0 0 Deletion 6 Homo FN3557-S Chr11 10733186 10733198 0 0 Deletion 12 Homo FN3557-S Chr11 16901455 16901472 0 0 Deletion 17 HET FN3557-S Chr11 16914543 A-T 0 0 Single Base Substitution 0 HET FN3557-S Chr11 23768054 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os11g39870 retrotransposon protein, putative, unclassified, expressed FN3557-S Chr11 8311425 Chr1 17033500 0 Translocation 0 LOC_Os11g14750 retrotransposon protein, putative, unclassified, expressed FN3557-S Chr11 9899458 9899467 0 0 Deletion 9 HET FN3557-S Chr12 13311053 C-A 0 0 Single Base Substitution 0 Homo FN3557-S Chr12 24102850 24102853 0 0 Deletion 3 Homo FN3557-S Chr12 26602699 A-G 0 0 Single Base Substitution 0 Homo FN3557-S Chr2 19898560 G-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g33460 transposon protein, putative, Mutator sub-class, expressed FN3557-S Chr2 2094370 2094379 0 0 Deletion 9 HET FN3557-S Chr2 21711001 21822000 0 0 Deletion 110999 LOC_Os02g36090 expressed protein FN3557-S Chr2 21711001 21822000 0 0 Deletion 110999 LOC_Os02g36100 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3557-S Chr2 21711001 21822000 0 0 Deletion 110999 LOC_Os02g36110 cytochrome P450, putative, expressed FN3557-S Chr2 21711001 21822000 0 0 Deletion 110999 LOC_Os02g36120 hypothetical protein FN3557-S Chr2 21711001 21822000 0 0 Deletion 110999 LOC_Os02g36130 expressed protein FN3557-S Chr2 21711001 21822000 0 0 Deletion 110999 LOC_Os02g36140 terpene synthase, putative, expressed FN3557-S Chr2 21711001 21822000 0 0 Deletion 110999 LOC_Os02g36150 cytochrome P450, putative, expressed FN3557-S Chr2 21711001 21822000 0 0 Deletion 110999 LOC_Os02g36160 transposon protein, putative, unclassified, expressed FN3557-S Chr2 21711001 21822000 0 0 Deletion 110999 LOC_Os02g36170 retrotransposon protein, putative, Ty3-gypsy subclass FN3557-S Chr2 21711001 21822000 0 0 Deletion 110999 LOC_Os02g36180 transposon protein, putative, unclassified, expressed FN3557-S Chr2 21711001 21822000 0 0 Deletion 110999 LOC_Os02g36190 cytochrome P450, putative, expressed FN3557-S Chr2 22265274 22265275 0 0 Deletion 1 HET FN3557-S Chr2 31 Chr1 1116 0 Translocation 0 FN3557-S Chr2 32764606 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g53550 retrotransposon protein, putative, unclassified, expressed FN3557-S Chr2 5707707 C-A 0 0 Single Base Substitution 0 HET FN3557-S Chr3 1337746 T-C 0 0 Single Base Substitution 0 Homo FN3557-S Chr3 16778135 16778136 0 0 Deletion 1 HET FN3557-S Chr3 17930861 C-G 0 0 Single Base Substitution 0 HET FN3557-S Chr3 22598007 G-A 0 0 Single Base Substitution 0 HET FN3557-S Chr4 10598448 10598449 0 0 Deletion 1 frameshift_variant Homo LOC_Os04g19090 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3557-S Chr4 10949381 10954084 0 0 Inversion 0 FN3557-S Chr4 10949384 10954091 0 0 Inversion 0 FN3557-S Chr4 1517938 T-G 0 0 Single Base Substitution 0 Homo FN3557-S Chr4 20756980 20756981 0 0 Deletion 1 HET FN3557-S Chr4 21361189 21361366 0 0 Inversion 0 LOC_Os04g35140 OsSub41 - Putative Subtilisin homologue, expressed FN3557-S Chr4 25083256 Chr1 18542666 0 Translocation 0 LOC_Os04g42399 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3557-S Chr4 27732703 27732704 0 0 Deletion 1 Homo FN3557-S Chr4 2909712 T-A 0 0 Single Base Substitution 0 HET FN3557-S Chr4 31766027 31766032 0 0 Deletion 5 Homo FN3557-S Chr4 35074674 35074677 0 0 Deletion 3 Homo FN3557-S Chr5 14230001 14273000 0 0 Deletion 42999 LOC_Os05g24630 hypothetical protein FN3557-S Chr5 14230001 14273000 0 0 Deletion 42999 LOC_Os05g24640 retrotransposon protein, putative, unclassified, expressed FN3557-S Chr5 14230001 14273000 0 0 Deletion 42999 LOC_Os05g24650 DUF567 domain containing protein, putative, expressed FN3557-S Chr5 14230001 14273000 0 0 Deletion 42999 LOC_Os05g24654 transposon protein, putative, unclassified, expressed FN3557-S Chr5 14230001 14273000 0 0 Deletion 42999 LOC_Os05g24660 IPP transferase, putative, expressed FN3557-S Chr5 3013116 G-A 0 0 Single Base Substitution 0 HET FN3557-S Chr5 6247291 G-A 0 0 Single Base Substitution 0 Homo FN3557-S Chr5 8360229 8360230 0 0 Deletion 1 HET FN3557-S Chr6 14410453 14410460 0 0 Deletion 7 HET FN3557-S Chr6 15023416 T-C 0 0 Single Base Substitution 0 HET FN3557-S Chr6 16196322 A-T 0 0 Single Base Substitution 0 Homo FN3557-S Chr6 25094878 25094880 0 0 Deletion 2 HET FN3557-S Chr6 25408824 25408841 0 0 Deletion 17 frameshift_variant HET LOC_Os06g42300 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3557-S Chr6 28201353 G-A 0 0 Single Base Substitution 0 HET FN3557-S Chr6 30719088 G-A 0 0 Single Base Substitution 0 HET FN3557-S Chr7 10628031 C-T 0 0 Single Base Substitution 0 HET FN3557-S Chr7 14056065 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g24700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3557-S Chr7 1406972 1406973 0 0 Insertion 1 frameshift_variant HET LOC_Os07g03520 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3557-S Chr7 8341627 8341630 0 0 Deletion 3 HET FN3557-S Chr8 13284192 13284225 0 0 Deletion 33 Homo FN3557-S Chr8 13858770 G-C 0 0 Single Base Substitution 0 Homo FN3557-S Chr8 22651595 Chr7 3872141 0 Translocation 0 LOC_Os07g07709 ribosomal protein S13p/S18e, putative, expressed FN3557-S Chr8 22651595 Chr7 3872141 0 Translocation 0 LOC_Os08g35910 expressed protein FN3557-S Chr8 26018087 C-A 0 0 Single Base Substitution 0 HET FN3557-S Chr8 8565592 T-C 0 0 Single Base Substitution 0 HET FN3557-S Chr9 15598767 A-C 0 0 Single Base Substitution 0 Homo FN3557-S Chr9 5495450 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os09g10080 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3557-S Chr9 627181 C-A 0 0 Single Base Substitution 0 HET FN3557-S Chr9 808868 808875 0 0 Deletion 7 HET