FN3561-S Chr1 14053360 14053376 0 0 Deletion 16 frameshift_variant HET LOC_Os01g24940 poly synthetase 2-A, putative, expressed FN3561-S Chr1 18467001 18489000 0 0 Deletion 21999 LOC_Os01g33560 retrotransposon protein, putative, unclassified, expressed FN3561-S Chr1 18467001 18489000 0 0 Deletion 21999 LOC_Os01g33580 retrotransposon, putative, centromere-specific FN3561-S Chr1 18467001 18489000 0 0 Deletion 21999 LOC_Os01g33590 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3561-S Chr1 29212528 G-A 0 0 Single Base Substitution 0 Homo FN3561-S Chr10 11908448 11908449 0 0 Deletion 1 HET FN3561-S Chr10 12609843 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os10g24560 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3561-S Chr10 14614513 G-A 0 0 Single Base Substitution 0 HET FN3561-S Chr10 15991795 15991813 0 0 Deletion 18 HET FN3561-S Chr10 21347166 A-G 0 0 Single Base Substitution 0 Homo FN3561-S Chr11 13220593 Chr5 29713108 0 Translocation 0 FN3561-S Chr11 23494313 C-T 0 0 Single Base Substitution 0 Homo FN3561-S Chr11 4550626 4550776 0 0 Inversion 0 LOC_Os11g08569 cycloartenol synthase, putative, expressed FN3561-S Chr12 10991397 10991415 0 0 Deletion 18 disruptive_inframe_deletion Homo LOC_Os12g18940 retrotransposon protein, putative, Ty3-gypsy subclass FN3561-S Chr12 16543656 G-T 0 0 Single Base Substitution 0 Homo FN3561-S Chr2 132315 132322 0 0 Deletion 7 Homo FN3561-S Chr2 13466916 Chr1 18469092 0 Translocation 0 FN3561-S Chr2 6443415 6443418 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os02g12370 expressed protein FN3561-S Chr3 12415794 12416251 0 0 Inversion 0 FN3561-S Chr3 1259507 1259511 0 0 Deletion 4 frameshift_variant HET LOC_Os03g03050 expressed protein FN3561-S Chr3 14266196 14266199 0 0 Deletion 3 Homo FN3561-S Chr3 15138760 15138772 0 0 Insertion 12 inframe_insertion HET LOC_Os03g26510 hypothetical protein FN3561-S Chr3 15788200 15788201 0 0 Deletion 1 frameshift_variant HET LOC_Os03g27520 transposon protein, putative, CACTA, En/Spm sub-class FN3561-S Chr3 30819947 30819949 0 0 Insertion 2 HET FN3561-S Chr3 30923709 30923839 0 0 Deletion 130 HET FN3561-S Chr4 16621018 16621025 0 0 Deletion 7 HET FN3561-S Chr4 18282028 T-C 0 0 Single Base Substitution 0 Homo FN3561-S Chr4 23150509 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g38970 protein binding protein, putative, expressed FN3561-S Chr4 28498661 C-T 0 0 Single Base Substitution 0 Homo FN3561-S Chr4 6458949 6458954 0 0 Deletion 5 Homo FN3561-S Chr5 14821482 G-A 0 0 Single Base Substitution 0 Homo FN3561-S Chr5 27461503 27461511 0 0 Deletion 8 frameshift_variant HET LOC_Os05g47890 WD domain, G-beta repeat domain containing protein, expressed FN3561-S Chr5 29098332 G-A 0 0 Single Base Substitution 0 HET FN3561-S Chr5 29609963 Chr2 16008945 0 Translocation 0 LOC_Os02g27210 hypothetical protein FN3561-S Chr5 29609963 Chr2 16008945 0 Translocation 0 LOC_Os05g51630 early-responsive to dehydration protein-related, putative, expressed FN3561-S Chr5 29610271 Chr2 15993584 0 Translocation 0 LOC_Os02g27170 hypothetical protein FN3561-S Chr5 29610271 Chr2 15993584 0 Translocation 0 LOC_Os05g51630 early-responsive to dehydration protein-related, putative, expressed FN3561-S Chr6 14585171 A-T 0 0 Single Base Substitution 0 HET FN3561-S Chr6 17232684 G-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os06g29920 retrotransposon protein, putative, unclassified, expressed FN3561-S Chr6 25383921 25383924 0 0 Deletion 3 HET FN3561-S Chr6 27907587 T-C 0 0 Single Base Substitution 0 HET FN3561-S Chr6 9937273 G-A 0 0 Single Base Substitution 0 HET FN3561-S Chr7 1241762 Chr1 39841277 0 Translocation 0 FN3561-S Chr7 20187600 20187601 0 0 Deletion 1 HET FN3561-S Chr7 27969520 T-C 0 0 Single Base Substitution 0 HET FN3561-S Chr7 2894475 C-T 0 0 Single Base Substitution 0 Homo FN3561-S Chr7 2894535 2894536 0 0 Deletion 1 Homo FN3561-S Chr7 8182843 A-T 0 0 Single Base Substitution 0 Homo FN3561-S Chr7 9207574 9207579 0 0 Deletion 5 Homo FN3561-S Chr8 11334305 11334342 0 0 Insertion 37 HET FN3561-S Chr8 3661018 A-T 0 0 Single Base Substitution 0 HET FN3561-S Chr8 6049627 6049635 0 0 Deletion 8 HET FN3561-S Chr9 3971580 3971581 0 0 Deletion 1 Homo FN3561-S Chr9 8020977 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os09g13710 retrotransposon protein, putative, Ty3-gypsy subclass, expressed