FN3562-S Chr1 29306232 T-C 0 0 Single Base Substitution 0 HET FN3562-S Chr1 30404341 30404342 0 0 Deletion 1 Homo FN3562-S Chr1 9909673 C-T 0 0 Single Base Substitution 0 HET FN3562-S Chr10 12528896 12528897 0 0 Insertion 1 HET FN3562-S Chr10 3058105 G-A 0 0 Single Base Substitution 0 HET FN3562-S Chr10 8937440 A-G 0 0 Single Base Substitution 0 HET FN3562-S Chr11 12792500 12792517 0 0 Deletion 17 splice_donor_variant&disruptive_inframe_deletion&splice_region_variant&intron_variant HET LOC_Os11g22310 retrotransposon protein, putative, unclassified, expressed FN3562-S Chr11 17279126 17279127 0 0 Deletion 1 Homo FN3562-S Chr11 24242268 24242288 0 0 Deletion 20 Homo FN3562-S Chr11 28929298 Chr4 22603805 0 Translocation 0 FN3562-S Chr11 359467 Chr1 7547434 0 Translocation 0 LOC_Os01g13520 auxin response factor 1, putative, expressed FN3562-S Chr11 359467 Chr1 7547434 0 Translocation 0 LOC_Os11g01620 inactive receptor kinase At2g26730 precursor, putative, expressed FN3562-S Chr11 5341190 5341191 0 0 Deletion 1 HET FN3562-S Chr11 5790864 G-A 0 0 Single Base Substitution 0 HET FN3562-S Chr12 115543 198039 0 0 Inversion 0 LOC_Os12g01200 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed FN3562-S Chr12 11575371 11575372 0 0 Insertion 1 HET FN3562-S Chr12 17835352 17835356 0 0 Insertion 4 HET FN3562-S Chr12 1956254 G-A 0 0 Single Base Substitution 0 HET FN3562-S Chr2 10357986 10357989 0 0 Deletion 3 HET FN3562-S Chr2 14449446 G-A 0 0 Single Base Substitution 0 Homo FN3562-S Chr2 14488302 G-A 0 0 Single Base Substitution 0 HET FN3562-S Chr2 17906736 G-T 0 0 Single Base Substitution 0 HET FN3562-S Chr2 23003383 G-A 0 0 Single Base Substitution 0 HET FN3562-S Chr2 26470001 26489000 0 0 Deletion 18999 LOC_Os02g43840 ethylene-responsive element-binding protein, putative, expressed FN3562-S Chr2 26470001 26489000 0 0 Deletion 18999 LOC_Os02g43850 serine esterase family protein, putative, expressed FN3562-S Chr2 26470001 26489000 0 0 Deletion 18999 LOC_Os02g43860 amino acid permease, putative, expressed FN3562-S Chr2 30156181 30156187 0 0 Deletion 6 HET FN3562-S Chr2 33500574 33501029 0 0 Inversion 0 FN3562-S Chr2 4546159 T-A 0 0 Single Base Substitution 0 Homo FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36390 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36400 retrotransposon protein, putative, LINE subclass, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36419 expressed protein FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36439 F-box domain containing protein, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36460 expressed protein FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36470 retrotransposon protein, putative, unclassified, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36480 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36490 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36500 expressed protein FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36520 retrotransposon, putative, centromere-specific, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36530 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36534 expressed protein FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36540 magnesium-chelatase subunit chlI, chloroplast precursor, putative, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36550 transposon protein, putative, unclassified, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36560 peroxidase precursor, putative, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36570 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36580 retrotransposon protein, putative, Ty3-gypsy subclass FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36590 retrotransposon protein, putative, unclassified, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36600 retrotransposon protein, putative, unclassified, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36610 retrotransposon protein, putative, unclassified FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36620 retrotransposon protein, putative, unclassified, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36630 expressed protein FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36640 expressed protein FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36650 cysteine-rich repeat secretory protein 55 precursor, putative, expressed FN3562-S Chr3 20174001 20333000 0 0 Deletion 158999 LOC_Os03g36660 retrotransposon protein, putative, unclassified, expressed FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36670 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36684 retrotransposon protein, putative, unclassified, expressed FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36700 retrotransposon protein, putative, unclassified, expressed FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36710 retrotransposon protein, putative, unclassified, expressed FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36720 retrotransposon protein, putative, Ty3-gypsy subclass FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36730 OST3/OST6 family protein, putative, expressed FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36740 retrotransposon protein, putative, Ty3-gypsy subclass FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36750 cbbY, putative, expressed FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36760 expressed protein FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36770 expressed protein FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36780 elongation factor, putative, expressed FN3562-S Chr3 20341001 20430000 0 0 Deletion 88999 LOC_Os03g36790 tobamovirus multiplication protein, putative, expressed FN3562-S Chr3 27366436 27366438 0 0 Deletion 2 Homo FN3562-S Chr3 27847319 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g48904 expressed protein FN3562-S Chr3 27847320 T-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g48904 expressed protein FN3562-S Chr3 27847326 G-A 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR Homo LOC_Os03g48904 expressed protein FN3562-S Chr3 27847327 T-A 0 0 Single Base Substitution 0 SPLICE_SITE_DONOR Homo LOC_Os03g48904 expressed protein FN3562-S Chr3 27893838 27893857 0 0 Deletion 19 frameshift_variant&splice_acceptor_variant&splice_region_variant&intron_variant Homo LOC_Os03g48970 nuclear transcription factor Y subunit, putative, expressed FN3562-S Chr3 28306047 28306056 0 0 Deletion 9 Homo FN3562-S Chr3 35477253 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os03g62690 pentatricopeptide, putative, expressed FN3562-S Chr4 10264900 C-T 0 0 Single Base Substitution 0 HET FN3562-S Chr4 1434283 T-C 0 0 Single Base Substitution 0 HET FN3562-S Chr4 21037370 G-A 0 0 Single Base Substitution 0 HET FN3562-S Chr4 2700745 2700746 0 0 Deletion 1 HET FN3562-S Chr5 17227409 A-T 0 0 Single Base Substitution 0 HET FN3562-S Chr5 23514860 23514862 0 0 Deletion 2 Homo FN3562-S Chr5 5580721 T-C 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g10260 retrotransposon protein, putative, unclassified, expressed FN3562-S Chr6 10672833 G-A 0 0 Single Base Substitution 0 HET FN3562-S Chr6 19777320 19777322 0 0 Deletion 2 HET FN3562-S Chr6 20298219 20298223 0 0 Insertion 4 HET FN3562-S Chr6 26597810 26597812 0 0 Insertion 2 HET FN3562-S Chr6 9214333 T-C 0 0 Single Base Substitution 0 HET FN3562-S Chr7 25499808 T-A 0 0 Single Base Substitution 0 HET FN3562-S Chr7 25499809 T-A 0 0 Single Base Substitution 0 HET FN3562-S Chr7 6727098 G-A 0 0 Single Base Substitution 0 HET FN3562-S Chr8 10552650 10898692 0 0 Inversion 0 FN3562-S Chr8 10552665 10898704 0 0 Inversion 0 FN3562-S Chr8 11236832 A-G 0 0 Single Base Substitution 0 Homo FN3562-S Chr8 12420123 12420124 0 0 Insertion 1 HET FN3562-S Chr8 15214874 C-T 0 0 Single Base Substitution 0 Homo FN3562-S Chr8 1692514 A-T 0 0 Single Base Substitution 0 HET FN3562-S Chr8 24324801 C-T 0 0 Single Base Substitution 0 HET FN3562-S Chr8 25325126 25325137 0 0 Deletion 11 HET FN3562-S Chr8 28195395 Chr5 15082064 0 Translocation 0 FN3562-S Chr8 28195395 Chr5 15082064 0 Translocation 0 LOC_Os05g25930 expressed protein FN3562-S Chr8 2853428 A-G 0 0 Single Base Substitution 0 HET FN3562-S Chr9 16861204 C-T 0 0 Single Base Substitution 0 Homo