FN3563-S Chr1 15838575 A-T 0 0 Single Base Substitution 0 Homo FN3563-S Chr1 16961997 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g31020 retrotransposon protein, putative, unclassified, expressed FN3563-S Chr1 25095736 25095737 0 0 Deletion 1 Homo FN3563-S Chr1 26340760 26340768 0 0 Deletion 8 HET FN3563-S Chr1 28701302 T-C 0 0 Single Base Substitution 0 HET FN3563-S Chr1 39550367 A-T 0 0 Single Base Substitution 0 HET FN3563-S Chr1 7633239 7633240 0 0 Insertion 1 Homo FN3563-S Chr10 10562287 G-A 0 0 Single Base Substitution 0 HET FN3563-S Chr10 12020049 T-A 0 0 Single Base Substitution 0 HET FN3563-S Chr10 12020050 T-A 0 0 Single Base Substitution 0 HET FN3563-S Chr10 18044705 18125115 0 0 Inversion 0 FN3563-S Chr10 18044710 18125116 0 0 Inversion 0 FN3563-S Chr10 22165739 T-C 0 0 Single Base Substitution 0 HET FN3563-S Chr10 3049099 3049105 0 0 Deletion 6 disruptive_inframe_deletion HET LOC_Os10g06010 retrotransposon protein, putative, unclassified, expressed FN3563-S Chr10 634283 634286 0 0 Deletion 3 HET FN3563-S Chr10 6853236 C-A 0 0 Single Base Substitution 0 HET FN3563-S Chr11 12760984 12760992 0 0 Deletion 8 HET FN3563-S Chr11 20129660 A-G 0 0 Single Base Substitution 0 HET FN3563-S Chr12 11676679 C-T 0 0 Single Base Substitution 0 HET FN3563-S Chr12 1321216 1321223 0 0 Deletion 7 HET FN3563-S Chr12 16729550 16729574 0 0 Deletion 24 disruptive_inframe_deletion Homo LOC_Os12g28290 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3563-S Chr12 19030375 Chr11 28433553 0 Translocation 0 FN3563-S Chr12 19030375 Chr11 28433553 0 Translocation 0 LOC_Os11g47290 receptor kinase, putative, expressed FN3563-S Chr12 20424671 20424691 0 0 Deletion 20 Homo FN3563-S Chr12 25773389 25773394 0 0 Deletion 5 HET FN3563-S Chr12 2777324 G-A 0 0 Single Base Substitution 0 Homo FN3563-S Chr2 25040427 G-A 0 0 Single Base Substitution 0 HET FN3563-S Chr3 10017864 10017866 0 0 Deletion 2 HET FN3563-S Chr3 15549529 15549531 0 0 Deletion 2 HET FN3563-S Chr3 18114546 18114555 0 0 Deletion 9 Homo FN3563-S Chr3 22803447 G-T 0 0 Single Base Substitution 0 HET FN3563-S Chr3 23118466 23118474 0 0 Deletion 8 HET FN3563-S Chr3 27074742 G-T 0 0 Single Base Substitution 0 Homo FN3563-S Chr3 31027072 A-T 0 0 Single Base Substitution 0 HET FN3563-S Chr3 5444199 5444201 0 0 Insertion 2 HET FN3563-S Chr3 6868019 6868023 0 0 Deletion 4 HET FN3563-S Chr4 17349534 C-T 0 0 Single Base Substitution 0 HET FN3563-S Chr4 21780932 21780933 0 0 Insertion 1 HET FN3563-S Chr4 25014462 A-C 0 0 Single Base Substitution 0 HET FN3563-S Chr4 25014480 G-A 0 0 Single Base Substitution 0 HET FN3563-S Chr4 3096471 G-C 0 0 Single Base Substitution 0 Homo FN3563-S Chr4 3579072 G-A 0 0 Single Base Substitution 0 Homo FN3563-S Chr4 392633 Chr2 17921317 0 Translocation 0 FN3563-S Chr4 392633 Chr2 17921317 0 Translocation 0 LOC_Os02g30160 retrotransposon protein, putative, unclassified, expressed FN3563-S Chr4 9394680 Chr3 19296602 0 Translocation 0 FN3563-S Chr5 12389726 12389727 0 0 Deletion 1 Homo FN3563-S Chr5 5154448 C-A 0 0 Single Base Substitution 0 Homo FN3563-S Chr5 6179547 G-T 0 0 Single Base Substitution 0 Homo FN3563-S Chr6 11067735 C-T 0 0 Single Base Substitution 0 Homo FN3563-S Chr6 20951378 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g35910 FYVE zinc finger domain containing protein, expressed FN3563-S Chr6 31098602 31098608 0 0 Deletion 6 HET FN3563-S Chr6 31102291 31102297 0 0 Deletion 6 HET FN3563-S Chr6 6653800 6653808 0 0 Deletion 8 HET FN3563-S Chr6 7724725 C-T 0 0 Single Base Substitution 0 HET FN3563-S Chr7 12537407 12537414 0 0 Deletion 7 Homo FN3563-S Chr7 16800170 G-T 0 0 Single Base Substitution 0 Homo FN3563-S Chr7 17999618 T-C 0 0 Single Base Substitution 0 HET FN3563-S Chr7 18889321 18889324 0 0 Insertion 3 HET FN3563-S Chr7 20898146 Chr6 10042624 0 Translocation 0 FN3563-S Chr7 8407965 8407973 0 0 Deletion 8 Homo FN3563-S Chr8 12803875 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g21480 retrotransposon protein, putative, Ty3-gypsy subclass FN3563-S Chr8 17598255 G-A 0 0 Single Base Substitution 0 HET FN3563-S Chr8 19520755 A-G 0 0 Single Base Substitution 0 HET FN3563-S Chr8 4091618 Chr7 16953421 0 Translocation 0 FN3563-S Chr8 4091618 Chr7 16953421 0 Translocation 0 LOC_Os07g28910 LSD1 zinc finger domain containing protein, expressed FN3563-S Chr8 7170581 C-T 0 0 Single Base Substitution 0 HET FN3563-S Chr9 12343351 12343780 0 0 Inversion 0 FN3563-S Chr9 17076374 G-A 0 0 Single Base Substitution 0 Homo FN3563-S Chr9 17685975 A-T 0 0 Single Base Substitution 0 HET FN3563-S Chr9 18788888 18788898 0 0 Insertion 10 HET FN3563-S Chr9 20319768 20319775 0 0 Deletion 7 frameshift_variant HET LOC_Os09g34860 hydrolase, alpha/beta fold family domain containing protein, expressed FN3563-S Chr9 20655804 G-A 0 0 Single Base Substitution 0 Homo