FN3592-S Chr1 12099536 C-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g21600 retrotransposon protein, putative, unclassified, expressed FN3592-S Chr1 26418162 G-T 0 0 Single Base Substitution 0 HET FN3592-S Chr1 27570643 G-T 0 0 Single Base Substitution 0 HET FN3592-S Chr1 29082263 G-T 0 0 Single Base Substitution 0 HET FN3592-S Chr1 37664169 G-A 0 0 Single Base Substitution 0 HET FN3592-S Chr1 38219721 C-A 0 0 Single Base Substitution 0 HET FN3592-S Chr1 40125243 40125244 0 0 Deletion 1 Homo FN3592-S Chr11 15554806 G-A 0 0 Single Base Substitution 0 HET FN3592-S Chr11 20080198 20453718 0 0 Inversion 0 FN3592-S Chr11 20080203 20762131 0 0 Inversion 0 FN3592-S Chr11 20080203 20762131 0 0 Inversion 0 LOC_Os11g35430 csAtPR5, putative, expressed FN3592-S Chr11 20404476 20762116 0 0 Inversion 0 LOC_Os11g34824 expressed protein FN3592-S Chr11 20404476 20762116 0 0 Inversion 0 LOC_Os11g35430 csAtPR5, putative, expressed FN3592-S Chr11 20404479 20453718 0 0 Inversion 0 LOC_Os11g34824 expressed protein FN3592-S Chr11 23613164 T-G 0 0 Single Base Substitution 0 HET FN3592-S Chr11 9597616 A-G 0 0 Single Base Substitution 0 HET FN3592-S Chr12 11913766 11913768 0 0 Insertion 2 HET FN3592-S Chr12 17421268 17421270 0 0 Deletion 2 frameshift_variant HET LOC_Os12g29350 ATP binding protein, putative, expressed FN3592-S Chr12 21371881 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g35120 transposon protein, putative, unclassified, expressed FN3592-S Chr12 22022332 Chr4 15487733 0 Translocation 0 FN3592-S Chr12 5199842 5199849 0 0 Deletion 7 frameshift_variant Homo LOC_Os12g09820 retrotransposon protein, putative, unclassified, expressed FN3592-S Chr12 6659879 Chr5 2040949 0 Translocation 0 FN3592-S Chr12 6659879 Chr5 2040949 0 Translocation 0 LOC_Os05g04430 retrotransposon protein, putative, unclassified, expressed FN3592-S Chr12 8661993 8662002 0 0 Deletion 9 HET FN3592-S Chr2 11548165 Chr1 22081733 0 Translocation 0 LOC_Os02g19730 retrotransposon protein, putative, unclassified, expressed FN3592-S Chr2 13113701 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os02g22050 retrotransposon protein, putative, unclassified, expressed FN3592-S Chr2 23155038 G-A 0 0 Single Base Substitution 0 Homo FN3592-S Chr2 23664972 23664975 0 0 Deletion 3 disruptive_inframe_deletion HET LOC_Os02g39180 expressed protein FN3592-S Chr2 25101743 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g41750 transposon protein, putative, unclassified FN3592-S Chr2 32477789 G-A 0 0 Single Base Substitution 0 HET FN3592-S Chr2 5279921 5279922 0 0 Deletion 1 HET FN3592-S Chr3 10650376 T-A 0 0 Single Base Substitution 0 HET FN3592-S Chr3 13293674 13293687 0 0 Deletion 13 Homo FN3592-S Chr3 17954274 G-T 0 0 Single Base Substitution 0 Homo FN3592-S Chr3 19751112 G-A 0 0 Single Base Substitution 0 HET FN3592-S Chr3 2171056 2171072 0 0 Deletion 16 frameshift_variant HET LOC_Os03g04630 cytochrome P450 protein, putative, expressed FN3592-S Chr3 35009613 Chr1 39641163 0 Translocation 0 LOC_Os01g68200 expressed protein FN3592-S Chr3 35009613 Chr1 39641163 0 Translocation 0 LOC_Os03g61760 OsSPL6 - SBP-box gene family member, expressed FN3592-S Chr3 35013906 Chr1 39641158 0 Translocation 0 LOC_Os01g68200 expressed protein FN3592-S Chr3 35013906 Chr1 39641158 0 Translocation 0 LOC_Os03g61760 OsSPL6 - SBP-box gene family member, expressed FN3592-S Chr3 7553402 7553404 0 0 Deletion 2 frameshift_variant HET LOC_Os03g13920 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3592-S Chr4 10332844 10813679 0 0 Inversion 0 LOC_Os04g18660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3592-S Chr4 10334159 10813068 0 0 Inversion 0 LOC_Os04g18660 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3592-S Chr4 10812922 11455771 0 0 Inversion 0 FN3592-S Chr4 10812922 11455771 0 0 Inversion 0 LOC_Os04g20474 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN3592-S Chr4 11360100 11455572 0 0 Inversion 0 LOC_Os04g20310 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3592-S Chr4 11360100 11455572 0 0 Inversion 0 LOC_Os04g20474 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN3592-S Chr4 11360112 11455795 0 0 Inversion 0 LOC_Os04g20310 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3592-S Chr4 12137933 G-A 0 0 Single Base Substitution 0 Homo FN3592-S Chr4 26176757 G-C 0 0 Single Base Substitution 0 HET FN3592-S Chr4 6514205 6514210 0 0 Deletion 5 Homo FN3592-S Chr5 11996173 11996176 0 0 Deletion 3 disruptive_inframe_deletion Homo LOC_Os05g20440 retrotransposon protein, putative, unclassified, expressed FN3592-S Chr5 17978883 T-C 0 0 Single Base Substitution 0 HET FN3592-S Chr5 18619001 18631000 0 0 Deletion 11999 LOC_Os05g31970 expressed protein FN3592-S Chr5 21816867 21816868 0 0 Insertion 1 HET FN3592-S Chr5 23693612 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os05g40320 PPR repeat domain containing protein, putative, expressed FN3592-S Chr6 18145846 C-A 0 0 Single Base Substitution 0 HET FN3592-S Chr6 23106082 C-T 0 0 Single Base Substitution 0 HET FN3592-S Chr6 27829185 G-T 0 0 Single Base Substitution 0 HET FN3592-S Chr6 5195845 5195853 0 0 Deletion 8 frameshift_variant HET LOC_Os06g10150 hypothetical protein FN3592-S Chr6 761447 C-T 0 0 Single Base Substitution 0 HET FN3592-S Chr6 761448 T-C 0 0 Single Base Substitution 0 HET FN3592-S Chr6 9408967 9408978 0 0 Deletion 11 Homo FN3592-S Chr7 1596455 A-G 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os07g03820 lectin-like receptor kinase, putative, expressed FN3592-S Chr7 7437416 7437427 0 0 Deletion 11 HET FN3592-S Chr8 22057014 G-A 0 0 Single Base Substitution 0 HET FN3592-S Chr8 2605615 2605634 0 0 Deletion 19 HET FN3592-S Chr8 27746761 C-T 0 0 Single Base Substitution 0 Homo FN3592-S Chr8 3232481 3232484 0 0 Insertion 3 HET FN3592-S Chr8 664595 664600 0 0 Deletion 5 Homo FN3592-S Chr9 18589062 A-G 0 0 Single Base Substitution 0 Homo FN3592-S Chr9 19463953 A-G 0 0 Single Base Substitution 0 Homo FN3592-S Chr9 2208603 T-C 0 0 Single Base Substitution 0 Homo FN3592-S Chr9 9998961 C-T 0 0 Single Base Substitution 0 HET