FN3596-S Chr1 18039249 T-A 0 0 Single Base Substitution 0 HET FN3596-S Chr1 18039251 G-T 0 0 Single Base Substitution 0 HET FN3596-S Chr1 19413959 19433006 0 0 Inversion 0 FN3596-S Chr1 33986494 33986495 0 0 Deletion 1 HET FN3596-S Chr1 9587067 A-T 0 0 Single Base Substitution 0 HET FN3596-S Chr10 18280731 18280732 0 0 Deletion 1 HET FN3596-S Chr10 19534417 19534435 0 0 Deletion 18 Homo FN3596-S Chr10 7741653 7741661 0 0 Deletion 8 frameshift_variant HET LOC_Os10g14295 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3596-S Chr10 8650949 Chr7 28608712 0 Translocation 0 FN3596-S Chr10 8650949 Chr7 28608712 0 Translocation 0 LOC_Os07g47900 retrotransposon protein, putative, unclassified FN3596-S Chr10 9491293 C-T 0 0 Single Base Substitution 0 HET FN3596-S Chr11 19322758 G-A 0 0 Single Base Substitution 0 HET FN3596-S Chr12 10166262 Chr4 8994569 0 Translocation 0 LOC_Os04g16540 retrotransposon protein, putative, Ty3-gypsy subclass FN3596-S Chr12 10166262 Chr4 8994569 0 Translocation 0 LOC_Os12g17750 retrotransposon protein, putative, Ty3-gypsy subclass FN3596-S Chr12 12385798 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os12g22020 expressed protein FN3596-S Chr12 14491537 14491538 0 0 Deletion 1 HET FN3596-S Chr12 18521684 Chr9 1654381 0 Translocation 0 LOC_Os12g30824 terpene synthase, putative, expressed FN3596-S Chr12 21015428 21015429 0 0 Deletion 1 Homo FN3596-S Chr12 5073169 A-G 0 0 Single Base Substitution 0 HET FN3596-S Chr2 10585808 T-C 0 0 Single Base Substitution 0 Homo FN3596-S Chr2 1398810 1398825 0 0 Deletion 15 Homo FN3596-S Chr2 16222546 T-C 0 0 Single Base Substitution 0 Homo FN3596-S Chr2 22231938 22231939 0 0 Deletion 1 HET FN3596-S Chr2 3653919 C-G 0 0 Single Base Substitution 0 Homo FN3596-S Chr2 8704297 8852596 0 0 Inversion 0 FN3596-S Chr2 8704307 8852600 0 0 Inversion 0 FN3596-S Chr2 9665048 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os02g16950 retrotransposon protein, putative, unclassified, expressed FN3596-S Chr3 12639999 12640011 0 0 Deletion 12 HET FN3596-S Chr3 2569022 2569028 0 0 Deletion 6 HET FN3596-S Chr3 26165478 C-A 0 0 Single Base Substitution 0 HET FN3596-S Chr3 34949871 C-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os03g61660 retrotransposon protein, putative, unclassified, expressed FN3596-S Chr3 35089806 35579403 0 0 Inversion 0 LOC_Os03g61890 chloroplast protein import component Toc159, putative, expressed FN3596-S Chr3 35089808 35579404 0 0 Inversion 0 LOC_Os03g61890 chloroplast protein import component Toc159, putative, expressed FN3596-S Chr3 6522078 G-A 0 0 Single Base Substitution 0 HET FN3596-S Chr4 18793001 18831000 0 0 Deletion 37999 LOC_Os04g31420 retrotransposon protein, putative, unclassified, expressed FN3596-S Chr4 18793001 18831000 0 0 Deletion 37999 LOC_Os04g31430 RALFL30 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed FN3596-S Chr4 18793001 18831000 0 0 Deletion 37999 LOC_Os04g31440 retrotransposon protein, putative, unclassified, expressed FN3596-S Chr4 18793001 18831000 0 0 Deletion 37999 LOC_Os04g31460 RALFL39 - Rapid ALkalinization Factor RALF family protein precursor, expressed FN3596-S Chr4 18793001 18831000 0 0 Deletion 37999 LOC_Os04g31470 expressed protein FN3596-S Chr4 18793001 18831000 0 0 Deletion 37999 LOC_Os04g31484 RALFL20 - Rapid ALkalinization Factor RALF family protein precursor, expressed FN3596-S Chr4 29102050 29102059 0 0 Deletion 9 HET FN3596-S Chr4 30663451 30663452 0 0 Insertion 1 HET FN3596-S Chr4 50727 C-T 0 0 Single Base Substitution 0 HET FN3596-S Chr4 5359564 C-T 0 0 Single Base Substitution 0 HET FN3596-S Chr4 6072352 6072353 0 0 Deletion 1 HET FN3596-S Chr4 6999411 6999420 0 0 Deletion 9 HET FN3596-S Chr4 7577793 7577794 0 0 Deletion 1 frameshift_variant HET LOC_Os04g13560 retrotransposon protein, putative, unclassified, expressed FN3596-S Chr4 7960864 7960865 0 0 Deletion 1 HET FN3596-S Chr4 8274775 C-A 0 0 Single Base Substitution 0 HET FN3596-S Chr5 13454900 A-G 0 0 Single Base Substitution 0 Homo FN3596-S Chr5 17492182 C-T 0 0 Single Base Substitution 0 HET FN3596-S Chr6 21336973 Chr4 20208700 0 Translocation 0 FN3596-S Chr6 23465790 Chr4 20897001 0 Translocation 0 FN3596-S Chr6 27245186 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os06g45030 transposon protein, putative, unclassified, expressed FN3596-S Chr6 9264319 G-A 0 0 Single Base Substitution 0 HET FN3596-S Chr7 17555480 17555482 0 0 Insertion 2 HET FN3596-S Chr7 17815049 T-C 0 0 Single Base Substitution 0 Homo FN3596-S Chr7 23123904 G-A 0 0 Single Base Substitution 0 HET FN3596-S Chr8 20167778 Chr7 1780280 0 Translocation 0 FN3596-S Chr8 20167778 Chr7 1780280 0 Translocation 0 LOC_Os07g04160 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed FN3596-S Chr8 20796925 20796936 0 0 Deletion 11 HET FN3596-S Chr8 24035775 24036142 0 0 Inversion 0 LOC_Os08g37950 copper-transporting ATPase PAA1, putative, expressed FN3596-S Chr8 25127247 25127268 0 0 Insertion 21 HET FN3596-S Chr8 6443584 6443611 0 0 Insertion 27 HET FN3596-S Chr9 14644820 C-T 0 0 Single Base Substitution 0 HET FN3596-S Chr9 15185098 A-G 0 0 Single Base Substitution 0 HET FN3596-S Chr9 17860384 A-C 0 0 Single Base Substitution 0 HET