FN3650-S Chr1 11761637 11761639 0 0 Deletion 2 frameshift_variant HET LOC_Os01g21080 retrotransposon protein, putative, unclassified FN3650-S Chr1 12293274 12293278 0 0 Deletion 4 HET FN3650-S Chr1 14600001 14636000 0 0 Deletion 35999 LOC_Os01g25760 powdery mildew resistance protein PM3F, putative, expressed FN3650-S Chr1 14600001 14636000 0 0 Deletion 35999 LOC_Os01g25770 expressed protein FN3650-S Chr1 14600001 14636000 0 0 Deletion 35999 LOC_Os01g25780 retrotransposon protein, putative, unclassified, expressed FN3650-S Chr1 14600001 14636000 0 0 Deletion 35999 LOC_Os01g25800 expressed protein FN3650-S Chr1 14600001 14636000 0 0 Deletion 35999 LOC_Os01g25810 powdery mildew resistance protein PM3A, putative, expressed FN3650-S Chr1 14600001 14636000 0 0 Deletion 35999 LOC_Os01g25820 respiratory burst oxidase, putative, expressed FN3650-S Chr1 14963186 C-T 0 0 Single Base Substitution 0 HET FN3650-S Chr1 27290737 A-T 0 0 Single Base Substitution 0 HET FN3650-S Chr1 27978918 27978920 0 0 Deletion 2 HET FN3650-S Chr10 13826270 A-G 0 0 Single Base Substitution 0 HET FN3650-S Chr10 2694374 2694374 0 0 Insertion 120 HET FN3650-S Chr10 3030943 3030947 0 0 Deletion 4 Homo FN3650-S Chr10 3898739 C-T 0 0 Single Base Substitution 0 HET FN3650-S Chr10 9609919 9609943 0 0 Deletion 24 Homo FN3650-S Chr11 10024566 10024568 0 0 Deletion 2 HET FN3650-S Chr11 25665151 25665152 0 0 Deletion 1 HET FN3650-S Chr11 3621919 T-A 0 0 Single Base Substitution 0 HET FN3650-S Chr11 6269936 6269941 0 0 Deletion 5 Homo FN3650-S Chr12 22007658 C-T 0 0 Single Base Substitution 0 HET FN3650-S Chr2 25438580 Chr1 30548311 0 Translocation 0 LOC_Os02g42300 expressed protein FN3650-S Chr2 25438588 Chr1 30544491 0 Translocation 0 LOC_Os02g42300 expressed protein FN3650-S Chr2 27916382 C-A 0 0 Single Base Substitution 0 HET FN3650-S Chr2 29034587 T-A 0 0 Single Base Substitution 0 HET FN3650-S Chr2 31961453 31961454 0 0 Deletion 1 HET FN3650-S Chr2 33905581 33905592 0 0 Deletion 11 frameshift_variant HET LOC_Os02g55350 retrotransposon protein, putative, unclassified, expressed FN3650-S Chr3 16999892 A-G 0 0 Single Base Substitution 0 HET FN3650-S Chr3 19816560 G-T 0 0 Single Base Substitution 0 Homo FN3650-S Chr3 22404761 22404766 0 0 Deletion 5 HET FN3650-S Chr3 30801082 30801090 0 0 Deletion 8 Homo FN3650-S Chr3 35021399 T-A 0 0 Single Base Substitution 0 HET FN3650-S Chr3 6547041 G-A 0 0 Single Base Substitution 0 HET FN3650-S Chr4 25666411 25666433 0 0 Deletion 22 frameshift_variant&splice_donor_variant&splice_region_variant&intron_variant Homo LOC_Os04g43390 Os4bglu16 - monolignol beta-glucoside homologue, expressed FN3650-S Chr4 28426728 G-A 0 0 Single Base Substitution 0 HET FN3650-S Chr4 5954006 5954019 0 0 Deletion 13 Homo FN3650-S Chr4 6576699 6576701 0 0 Deletion 2 HET FN3650-S Chr5 18557626 C-T 0 0 Single Base Substitution 0 Homo FN3650-S Chr5 22246987 22246987 0 0 Insertion 3 HET FN3650-S Chr5 25881046 25881047 0 0 Deletion 1 frameshift_variant HET LOC_Os05g44470 retrotransposon protein, putative, Ty3-gypsy subclass FN3650-S Chr5 27222568 27222581 0 0 Deletion 13 HET FN3650-S Chr5 27228857 T-C 0 0 Single Base Substitution 0 HET FN3650-S Chr5 29161728 G-C 0 0 Single Base Substitution 0 HET FN3650-S Chr5 3917580 C-A 0 0 Single Base Substitution 0 HET FN3650-S Chr6 17647371 C-T 0 0 Single Base Substitution 0 Homo FN3650-S Chr6 18098369 C-G 0 0 Single Base Substitution 0 Homo FN3650-S Chr6 1835804 G-C 0 0 Single Base Substitution 0 HET FN3650-S Chr6 26241410 26241415 0 0 Deletion 5 HET FN3650-S Chr6 6065521 6065528 0 0 Deletion 7 HET FN3650-S Chr7 11300157 G-T 0 0 Single Base Substitution 0 Homo FN3650-S Chr7 13541162 13541198 0 0 Deletion 36 Homo FN3650-S Chr7 14217606 C-T 0 0 Single Base Substitution 0 Homo FN3650-S Chr7 20174790 A-T 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os07g33740 vrga1, putative, expressed FN3650-S Chr7 21872236 21872236 0 0 Insertion 3 disruptive_inframe_insertion HET LOC_Os07g36580 expressed protein FN3650-S Chr7 22364286 22364287 0 0 Deletion 1 Homo FN3650-S Chr7 8370025 T-C 0 0 Single Base Substitution 0 Homo FN3650-S Chr7 9800188 9800207 0 0 Deletion 19 frameshift_variant HET LOC_Os07g16710 retrotransposon protein, putative, Ty3-gypsy subclass FN3650-S Chr8 1749639 C-A 0 0 Single Base Substitution 0 Homo FN3650-S Chr8 2249293 C-G 0 0 Single Base Substitution 0 HET FN3650-S Chr8 2352821 A-G 0 0 Single Base Substitution 0 Homo FN3650-S Chr8 3490996 A-G 0 0 Single Base Substitution 0 HET FN3650-S Chr8 3809120 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os08g06820 transposon protein, putative, unclassified, expressed FN3650-S Chr8 8367585 Chr2 16568539 0 Translocation 0 LOC_Os02g27980 retrotransposon protein, putative, Ty1-copia subclass FN3650-S Chr8 8367585 Chr2 16568539 0 Translocation 0 LOC_Os08g13960 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3650-S Chr9 12962816 12962819 0 0 Deletion 3 Homo FN3650-S Chr9 16035433 G-C 0 0 Single Base Substitution 0 HET FN3650-S Chr9 16533613 G-T 0 0 Single Base Substitution 0 HET