FN3657-S Chr1 14258265 T-G 0 0 Single Base Substitution 0 HET FN3657-S Chr1 17057524 17057524 0 0 Insertion 2 frameshift_variant HET LOC_Os01g31190 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3657-S Chr1 18915877 18915879 0 0 Deletion 2 HET FN3657-S Chr1 2951864 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g06200 retrotransposon protein, putative, unclassified, expressed FN3657-S Chr1 31816106 31816108 0 0 Deletion 2 frameshift_variant Homo LOC_Os01g55280 expressed protein FN3657-S Chr1 38421260 38421267 0 0 Deletion 7 HET FN3657-S Chr1 40785531 40785535 0 0 Deletion 4 HET FN3657-S Chr1 4755265 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os01g09340 expressed protein FN3657-S Chr10 13203684 G-A 0 0 Single Base Substitution 0 HET FN3657-S Chr10 21177601 A-T 0 0 Single Base Substitution 0 Homo FN3657-S Chr10 21177603 C-T 0 0 Single Base Substitution 0 Homo FN3657-S Chr10 21177609 A-T 0 0 Single Base Substitution 0 Homo FN3657-S Chr10 2998743 Chr1 37755062 0 Translocation 0 FN3657-S Chr10 4556631 G-A 0 0 Single Base Substitution 0 HET FN3657-S Chr10 5040174 C-A 0 0 Single Base Substitution 0 Homo FN3657-S Chr11 15496401 A-G 0 0 Single Base Substitution 0 Homo FN3657-S Chr11 3158427 A-G 0 0 Single Base Substitution 0 HET FN3657-S Chr11 5599580 A-T 0 0 Single Base Substitution 0 HET FN3657-S Chr11 8289133 8289144 0 0 Deletion 11 HET FN3657-S Chr12 13273438 C-T 0 0 Single Base Substitution 0 HET FN3657-S Chr12 14349628 G-A 0 0 Single Base Substitution 0 HET FN3657-S Chr12 16335317 Chr8 18384093 0 Translocation 0 LOC_Os08g29920 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3657-S Chr12 16335317 Chr8 18384093 0 Translocation 0 LOC_Os12g27700 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3657-S Chr12 2172570 G-A 0 0 Single Base Substitution 0 Homo FN3657-S Chr2 28334233 G-T 0 0 Single Base Substitution 0 HET FN3657-S Chr2 9052389 9052398 0 0 Deletion 9 Homo FN3657-S Chr3 11200936 A-T 0 0 Single Base Substitution 0 HET FN3657-S Chr3 18407679 18407679 0 0 Insertion 14 HET FN3657-S Chr3 22796652 A-G 0 0 Single Base Substitution 0 HET FN3657-S Chr3 25287675 A-T 0 0 Single Base Substitution 0 HET FN3657-S Chr3 25289355 25946017 0 0 Inversion 0 LOC_Os03g45920 tubulin/FtsZ domain containing protein, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g45930 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g45960 thaumatin, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g45970 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g45980 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g45990 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46010 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46030 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46040 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46052 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46060 thaumatin family domain containing protein, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46070 thaumatin, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46080 transposon protein, putative, unclassified, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46090 endonuclease/exonuclease/phosphatase family domain containing protein, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46100 cupin domain containing protein, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46110 LTPL94 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46120 OsFBX100 - F-box domain containing protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46130 retrotransposon protein, putative, Ty3-gypsy subclass FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46134 retrotransposon protein, putative, unclassified FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46140 OsFBX101 - F-box domain containing protein, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46150 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46170 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46180 LTPL71 - Protease inhibitor/seed storage/LTP family protein precursor, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46190 parafibromin, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46200 acetyltransferase, GNAT family, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46220 retrotransposon protein, putative, unclassified, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46230 retrotransposon protein, putative, unclassified, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46240 hypothetical protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46250 acetyltransferase, GNAT family, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46260 DUF581 domain containing protein, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46270 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46280 transposon protein, putative, CACTA, En/Spm sub-class, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46290 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46300 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46310 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46320 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46325 pattern formation protein, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46330 pattern formation protein EMB30, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46340 pleckstrin homology domain-containing protein, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46350 transcription factor, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46370 retrotransposon protein, putative, unclassified, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46380 retrotransposon protein, putative, unclassified FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46390 ras-related protein, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46410 transmembrane protein 56, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46420 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46424 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46430 conserved hypothetical protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46440 BTBA4 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46450 retrotransposon protein, putative, Ty1-copia subclass, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46454 metal cation transporter, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46460 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46470 metal cation transporter, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46480 ranBP1 domain containing protein, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46490 40S ribosomal protein S21, putative, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46500 OsFBX102 - F-box domain containing protein, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46510 OsFBX103 - F-box domain containing protein, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46530 OsFBX104 - F-box domain containing protein, expressed FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46540 expressed protein FN3657-S Chr3 25947001 26341000 0 0 Deletion 393999 LOC_Os03g46550 RGH1A, putative, expressed FN3657-S Chr3 32375430 G-A 0 0 Single Base Substitution 0 Homo FN3657-S Chr3 32375431 G-T 0 0 Single Base Substitution 0 Homo FN3657-S Chr3 32544544 G-A 0 0 Single Base Substitution 0 Homo FN3657-S Chr3 7713094 G-T 0 0 Single Base Substitution 0 HET FN3657-S Chr3 9377516 A-C 0 0 Single Base Substitution 0 HET FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17780 WD domain, G-beta repeat domain containing protein, expressed FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17790 OsRCI2-5 - Putative low temperature and salt responsive protein, expressed FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17800 phosphatidylinositol transfer protein alpha isoform, putative, expressed FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17810 DUF260 domain containing protein, putative, expressed FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17820 hypothetical protein FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17830 retrotransposon protein, putative, Ty3-gypsy subclass, expressed FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17840 expressed protein FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17850 glycosyltransferase family 43 protein, putative, expressed FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17860 OsPDIL5-1 protein disulfide isomerase PDIL5-1, expressed FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17870 metallothionein, putative, expressed FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17880 expressed protein FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17890 expressed protein FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17900 hydrolase, alpha/beta fold family protein, putative, expressed FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17910 kinesin like protein, putative, expressed FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17920 RNA pseudouridine synthase, putative, expressed FN3657-S Chr3 9893001 9988000 0 0 Deletion 94999 LOC_Os03g17930 alpha-taxilin, putative, expressed FN3657-S Chr4 14224358 C-T 0 0 Single Base Substitution 0 Homo FN3657-S Chr4 15124585 15124587 0 0 Deletion 2 frameshift_variant Homo LOC_Os04g25990 tRNA methyltransferase complex GCD14 subunit, putative, expressed FN3657-S Chr4 20584840 20584854 0 0 Deletion 14 Homo FN3657-S Chr4 21101621 C-G 0 0 Single Base Substitution 0 HET FN3657-S Chr4 33037971 C-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING Homo LOC_Os04g55530 retrotransposon protein, putative, unclassified, expressed FN3657-S Chr5 11988951 G-A 0 0 Single Base Substitution 0 NON_SYNONYMOUS_CODING HET LOC_Os05g20430 retrotransposon protein, putative, unclassified, expressed FN3657-S Chr5 21293348 A-C 0 0 Single Base Substitution 0 Homo FN3657-S Chr6 10379484 Chr1 2481678 0 Translocation 0 LOC_Os06g17880 NBS-LRR disease resistance protein, putative, expressed FN3657-S Chr6 15138344 15138345 0 0 Deletion 1 frameshift_variant HET LOC_Os06g25890 retrotransposon protein, putative, unclassified, expressed FN3657-S Chr6 185095 T-C 0 0 Single Base Substitution 0 Homo FN3657-S Chr6 22465517 22465517 0 0 Insertion 1 HET FN3657-S Chr6 23392749 Chr2 20261349 0 Translocation 0 FN3657-S Chr6 25155001 A-G 0 0 Single Base Substitution 0 HET FN3657-S Chr6 25435764 A-G 0 0 Single Base Substitution 0 HET FN3657-S Chr6 26975701 C-A 0 0 Single Base Substitution 0 HET FN3657-S Chr6 439381 Chr2 29439183 0 Translocation 0 LOC_Os02g48094 expressed protein FN3657-S Chr6 439381 Chr2 29439183 0 Translocation 0 LOC_Os06g01760 ligA, putative, expressed FN3657-S Chr6 439390 Chr2 29439419 0 Translocation 0 LOC_Os02g48094 expressed protein FN3657-S Chr6 439390 Chr2 29439419 0 Translocation 0 LOC_Os06g01760 ligA, putative, expressed FN3657-S Chr6 9570582 A-T 0 0 Single Base Substitution 0 HET FN3657-S Chr7 20128959 T-A 0 0 Single Base Substitution 0 HET FN3657-S Chr7 24941088 24941088 0 0 Insertion 1 HET FN3657-S Chr7 27636899 T-C 0 0 Single Base Substitution 0 Homo FN3657-S Chr7 4528001 4540000 0 0 Deletion 11999 LOC_Os07g08790 targeting protein for Xklp2, putative, expressed FN3657-S Chr7 7873706 Chr6 30023811 0 Translocation 0 LOC_Os06g49600 hypothetical protein FN3657-S Chr7 7873706 Chr6 30023811 0 Translocation 0 LOC_Os07g13719 hypothetical protein FN3657-S Chr8 10230607 10230608 0 0 Deletion 1 HET FN3657-S Chr8 16899200 16899200 0 0 Insertion 6 HET FN3657-S Chr9 2261025 2261029 0 0 Deletion 4 frameshift_variant HET LOC_Os09g04260 retrotransposon protein, putative, unclassified, expressed